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Zinc in PDB, part 424 (files: 16921-16960), PDB 7kuq-8ca2

Experimental structures of coordination spheres of Zinc (Zn) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Zinc atoms. PDB files: 16921-16960 (PDB 7kuq-8ca2).
  1. 7kuq (Zn: 1) - Crystal Structure of Danio Rerio Histone Deacetylase 10 Y307F Mutant in Complex with N8-Acetylspermidine
    Other atoms: K (2); Na (1);
  2. 7kur (Zn: 1) - Crystal Structure of Danio Rerio Histone Deacetylase 10 Y307F Mutant in Complex with N-Acetylputrescine
    Other atoms: K (2); Na (1);
  3. 7kus (Zn: 1) - Crystal Structure of Danio Rerio Histone Deacetylase 10 H137A Mutant in Complex with N8-Acetylspermidine (Tetrahedral Intermediate)
    Other atoms: K (2);
  4. 7kut (Zn: 1) - Crystal Structure of Danio Rerio Histone Deacetylase 10 H137A Mutant in Complex with N-Acetylputrescine (Tetrahedral Intermediate)
    Other atoms: Na (1); K (2);
  5. 7kuv (Zn: 1) - Crystal Structure of Danio Rerio Histone Deacetylase 10 in Complex with Acetate
    Other atoms: K (2);
  6. 7kwo (Zn: 1) - Rfviiifc-Vwf-Xten (BIVV001)
    Other atoms: Cu (1); Ca (2);
  7. 7kyj (Zn: 2) - Structure of A Gnat Superfamily PA3944 Acetyltransferase in Complex with Zinc
  8. 7kz7 (Zn: 1) - Crystals Structure of the Mutated Protease Domain of Botulinum Neurotoxin X (X4130B1).
  9. 7kzl (Zn: 6) - Cyclopentane Peptide Nucleic Acid in Complex with Dna
    Other atoms: I (1);
  10. 7kzz (Zn: 8) - Cryo-Em Structure of Yiip-Fab Complex in Holo State
  11. 7l0b (Zn: 8) - Crystal Structure of Hydroxyacyl Glutathione Hydrolase (Glob) From Staphylococcus Aureus, Apoenzyme
  12. 7l0n (Zn: 2) - Circulating Sars-Cov-2 Spike N439K Variants Maintain Fitness While Evading Antibody-Mediated Immunity
    Other atoms: Cl (27); Na (6);
  13. 7l3l (Zn: 14) - Structure of TRAF5 and TRAF6 Ring Hetero Dimer
  14. 7l3o (Zn: 4) - Crystal Structure of the Rna Binding Domain of Threonyl-Trna Synthetase From Cryptosporidium Parvum Iowa II
    Other atoms: Ca (2);
  15. 7l52 (Zn: 2) - Crystal Structure of the Metallo Beta Lactamase L1 From Stenotrophomonas Maltophilia Determined By Serial Crystallography
  16. 7l6r (Zn: 1) - Crystal Structure of Sars-Cov-2 NSP16/10 Heterodimer in Complex with (M7GPPPA2M)Pupupapapa (Cap-1), S-Adenosyl-L-Homocysteine (Sah) and Manganese (Mn).
    Other atoms: Cl (3); Mn (1);
  17. 7l6t (Zn: 2) - Crystal Structure of Sars-Cov-2 NSP16/10 Heterodimer in Complex with (M7GPPPA2M)Pupupapapa (Cap-1), S-Adenosyl-L-Homocysteine (Sah) and Two Magnesium (Mg) Ions.
    Other atoms: Cl (1); Mg (2);
  18. 7lbr (Zn: 2) - Sars-Cov-2 Papain-Like Protease (Plpro) Bound to Inhibitor XR8-89
  19. 7lbs (Zn: 2) - Sars-Cov-2 Papain-Like Protease (Plpro) Bound to Inhibitor XR8-24
  20. 7lgp (Zn: 2) - Dape Enzyme From Shigella Flexneri
    Other atoms: Na (3); Cl (15);
  21. 7llf (Zn: 2) - Sars-Cov-2 Papain-Like Protease (Plpro) Bound to Inhibitor XR8-83
  22. 7llz (Zn: 2) - Sars-Cov-2 Papain-Like Protease (Plpro) Bound to Inhibitor XR8-69
  23. 7lmk (Zn: 4) - Crystal Structure of Bovine DNMT1 BAH1 Domain in Complex with H4K20ME3
  24. 7lmm (Zn: 4) - Crystal Structure of Bovine DNMT1 BAH1 Domain in Complex with H4K20ME2
  25. 7lo4 (Zn: 1) - Sars-Cov-2 Spike Receptor-Binding Domain with A G485R Mutation in Complex with Human ACE2
  26. 7los (Zn: 2) - Sars-Cov-2 Papain-Like Protease (Plpro) Bound to Inhibitor XR8-65
    Other atoms: Cl (1);
  27. 7lup (Zn: 1) - Human Tric/Cct Complex with Reovirus Outer Capsid Protein Sigma-3
  28. 7m1y (Zn: 2) - The Crystal Structure of Papain-Like Protease of Sars Cov-2, C111S Mutant, in Complex with Ebselen
    Other atoms: Cl (2); I (13); Na (2);
  29. 7mdh (Zn: 17) - Structural Basis For Light Acitvation of A Chloroplast Enzyme. the Structure of Sorghum Nadp-Malate Dehydrogenase in Its Oxidized Form
  30. 7nio (Zn: 6) - Crystal Structure of the Sars-Cov-2 Helicase Apo Form
  31. 7nn0 (Zn: 12) - Crystal Structure of the Sars-Cov-2 Helicase in Complex with Amp-Pnp
    Other atoms: Mg (1);
  32. 7nse (Zn: 1) - Bovine Endothelial Nitric Oxide Synthase, H4B-Free, Adma Complex
    Other atoms: As (2); Fe (2);
  33. 7tli (Zn: 1) - Thermolysin (90% Isopropanol Soaked Crystals)
    Other atoms: Ca (4);
  34. 7tln (Zn: 1) - Structural Analysis of the Inhibition of Thermolysin By An Active-Site-Directed Irreversible Inhibitor
    Other atoms: Ca (4);
  35. 7znf (Zn: 12) - Alternating Zinc Fingers in the Human Male Associated Protein Zfy: 2D uc(Nmr) Structure of An Even Finger and Implications For "Jumping-Linker" Dna Recognition
  36. 830c (Zn: 4) - Collagenase-3 (Mmp-13) Complexed to A Sulphone-Based Hydroxamic Acid
    Other atoms: Cl (2); Ca (2);
  37. 8adh (Zn: 2) - Interdomain Motion in Liver Alcohol Dehydrogenase. Structural and Energetic Analysis of the Hinge Bending Mode
  38. 8at1 (Zn: 2) - Crystal Structures of Aspartate Carbamoyltransferase Ligated with Phosphonoacetamide, Malonate, and Ctp or Atp at 2.8-Angstroms Resolution and Neutral P*H
  39. 8atc (Zn: 2) - Complex of N-Phosphonacetyl-L-Aspartate with Aspartate Carbamoyltransferase. X-Ray Refinement, Analysis of Conformational Changes and Catalytic and Allosteric Mechanisms
  40. 8ca2 (Zn: 1) - Engineering the Hydrophobic Pocket of Carbonic Anhydrase II
    Other atoms: Hg (1);
Page generated: Sat Apr 3 18:39:47 2021

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