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Zinc in PDB 6zx9: Crystal Structure of Siv Vpr,Fused to T4 Lysozyme, Isolated From Moustached Monkey, Bound to Human DDB1 and Human DCAF1 (Amino Acid Residues 1046-1396)

Enzymatic activity of Crystal Structure of Siv Vpr,Fused to T4 Lysozyme, Isolated From Moustached Monkey, Bound to Human DDB1 and Human DCAF1 (Amino Acid Residues 1046-1396)

All present enzymatic activity of Crystal Structure of Siv Vpr,Fused to T4 Lysozyme, Isolated From Moustached Monkey, Bound to Human DDB1 and Human DCAF1 (Amino Acid Residues 1046-1396):
2.7.11.1; 3.2.1.17;

Protein crystallography data

The structure of Crystal Structure of Siv Vpr,Fused to T4 Lysozyme, Isolated From Moustached Monkey, Bound to Human DDB1 and Human DCAF1 (Amino Acid Residues 1046-1396), PDB code: 6zx9 was solved by D.Schwefel, S.Banchenko, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 79.07 / 2.52
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 265.898, 95.54, 98.348, 90, 90, 90
R / Rfree (%) 21.6 / 26

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of Siv Vpr,Fused to T4 Lysozyme, Isolated From Moustached Monkey, Bound to Human DDB1 and Human DCAF1 (Amino Acid Residues 1046-1396) (pdb code 6zx9). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of Siv Vpr,Fused to T4 Lysozyme, Isolated From Moustached Monkey, Bound to Human DDB1 and Human DCAF1 (Amino Acid Residues 1046-1396), PDB code: 6zx9:

Zinc binding site 1 out of 1 in 6zx9

Go back to Zinc Binding Sites List in 6zx9
Zinc binding site 1 out of 1 in the Crystal Structure of Siv Vpr,Fused to T4 Lysozyme, Isolated From Moustached Monkey, Bound to Human DDB1 and Human DCAF1 (Amino Acid Residues 1046-1396)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Siv Vpr,Fused to T4 Lysozyme, Isolated From Moustached Monkey, Bound to Human DDB1 and Human DCAF1 (Amino Acid Residues 1046-1396) within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Zn101

b:79.6
occ:1.00
ND1 C:HIS91 1.9 93.2 1.0
ND1 C:HIS38 2.0 77.7 1.0
NE2 C:HIS84 2.3 72.3 1.0
SG C:CYS89 2.4 76.8 1.0
CE1 C:HIS91 2.7 87.7 1.0
CE1 C:HIS38 2.9 67.9 1.0
CD2 C:HIS84 2.9 71.6 1.0
CB C:CYS89 3.0 68.6 1.0
CG C:HIS91 3.1 89.2 1.0
CG C:HIS38 3.1 69.7 1.0
CE1 C:HIS84 3.5 74.2 1.0
CB C:HIS38 3.6 67.1 1.0
CB C:HIS91 3.6 87.3 1.0
CA C:CYS89 3.8 67.8 1.0
NE2 C:HIS91 3.9 87.5 1.0
NE2 C:HIS38 4.0 70.1 1.0
CD2 C:HIS91 4.1 88.5 1.0
CA C:HIS38 4.1 69.4 1.0
CD2 C:HIS38 4.2 70.0 1.0
CG C:HIS84 4.2 74.2 1.0
C C:CYS89 4.4 76.3 1.0
ND1 C:HIS84 4.5 74.8 1.0
N C:HIS91 4.5 85.6 1.0
N C:TYR90 4.6 80.0 1.0
CA C:HIS91 4.7 86.2 1.0
CE1 C:TYR85 4.9 71.9 1.0
O C:LYS37 5.0 70.8 1.0

Reference:

D.Schwefel, S.Banchenko. Crystal Structure of Siv Vpr,Fused to T4 Lysozyme, Isolated From Moustached Monkey, Bound to Human DDB1 and Human DCAF1 (Amino Acid Residues 1046-1396) To Be Published.
Page generated: Sat Aug 21 17:58:35 2021

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