Zinc in PDB 6zs1: Chaetomium Thermophilum Cuzn-Superoxide Dismutase
Enzymatic activity of Chaetomium Thermophilum Cuzn-Superoxide Dismutase
All present enzymatic activity of Chaetomium Thermophilum Cuzn-Superoxide Dismutase:
1.15.1.1;
Protein crystallography data
The structure of Chaetomium Thermophilum Cuzn-Superoxide Dismutase, PDB code: 6zs1
was solved by
A.C.Papageorgiou,
I.Mohsin,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
|
Resolution Low / High (Å)
|
38.59 /
1.56
|
|
Space group
|
P 61
|
|
Cell size a, b, c (Å), α, β, γ (°)
|
89.11,
89.11,
310.37,
90,
90,
120
|
|
R / Rfree (%)
|
17.3 /
20.4
|
Other elements in 6zs1:
The structure of Chaetomium Thermophilum Cuzn-Superoxide Dismutase also contains other interesting chemical elements:
Zinc Binding Sites:
The binding sites of Zinc atom in the Chaetomium Thermophilum Cuzn-Superoxide Dismutase
(pdb code 6zs1). This binding sites where shown within
5.0 Angstroms radius around Zinc atom.
In total 8 binding sites of Zinc where determined in the
Chaetomium Thermophilum Cuzn-Superoxide Dismutase, PDB code: 6zs1:
Jump to Zinc binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
Zinc binding site 1 out
of 8 in 6zs1
Go back to
Zinc Binding Sites List in 6zs1
Zinc binding site 1 out
of 8 in the Chaetomium Thermophilum Cuzn-Superoxide Dismutase
 Mono view
 Stereo pair view
|
|
A full contact list of Zinc with other atoms in the Zn binding
site number 1 of Chaetomium Thermophilum Cuzn-Superoxide Dismutase within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn501
b:13.9
occ:1.00
|
OD1
|
A:ASP84
|
2.0
|
13.3
|
1.0
|
|
ND1
|
A:HIS64
|
2.0
|
13.8
|
1.0
|
|
ND1
|
A:HIS72
|
2.0
|
12.5
|
1.0
|
|
ND1
|
A:HIS81
|
2.0
|
12.1
|
1.0
|
|
CG
|
A:ASP84
|
2.7
|
11.1
|
1.0
|
|
OD2
|
A:ASP84
|
2.9
|
11.6
|
1.0
|
|
CE1
|
A:HIS72
|
2.9
|
15.7
|
1.0
|
|
CE1
|
A:HIS64
|
2.9
|
14.8
|
1.0
|
|
CE1
|
A:HIS81
|
2.9
|
12.7
|
1.0
|
|
CG
|
A:HIS64
|
3.0
|
15.3
|
1.0
|
|
CG
|
A:HIS81
|
3.1
|
13.7
|
1.0
|
|
CG
|
A:HIS72
|
3.1
|
14.8
|
1.0
|
|
CB
|
A:HIS64
|
3.4
|
17.0
|
1.0
|
|
CB
|
A:HIS81
|
3.5
|
12.8
|
1.0
|
|
CB
|
A:HIS72
|
3.6
|
11.8
|
1.0
|
|
O
|
A:LYS137
|
3.8
|
17.6
|
1.0
|
|
CA
|
A:HIS72
|
3.8
|
11.1
|
1.0
|
|
NE2
|
A:HIS64
|
4.0
|
19.9
|
1.0
|
|
NE2
|
A:HIS72
|
4.1
|
13.7
|
1.0
|
|
NE2
|
A:HIS81
|
4.1
|
14.2
|
1.0
|
|
CD2
|
A:HIS64
|
4.1
|
21.0
|
1.0
|
|
CB
|
A:ASP84
|
4.1
|
12.4
|
1.0
|
|
CD2
|
A:HIS81
|
4.1
|
11.4
|
1.0
|
|
CD2
|
A:HIS72
|
4.2
|
12.8
|
1.0
|
|
CA
|
A:ASP84
|
4.6
|
10.8
|
1.0
|
|
N
|
A:HIS81
|
4.6
|
11.8
|
1.0
|
|
O
|
A:HOH699
|
4.6
|
21.3
|
1.0
|
|
CA
|
A:HIS81
|
4.7
|
13.5
|
1.0
|
|
N
|
A:GLY73
|
4.7
|
13.1
|
1.0
|
|
N
|
A:ASP84
|
4.8
|
12.3
|
1.0
|
|
C
|
A:LYS137
|
4.8
|
16.9
|
1.0
|
|
C
|
A:HIS72
|
4.8
|
14.2
|
1.0
|
|
N
|
A:HIS72
|
4.8
|
12.6
|
1.0
|
|
CA
|
A:HIS64
|
4.9
|
14.3
|
1.0
|
|
Zinc binding site 2 out
of 8 in 6zs1
Go back to
Zinc Binding Sites List in 6zs1
Zinc binding site 2 out
of 8 in the Chaetomium Thermophilum Cuzn-Superoxide Dismutase
 Mono view
 Stereo pair view
|
|
A full contact list of Zinc with other atoms in the Zn binding
site number 2 of Chaetomium Thermophilum Cuzn-Superoxide Dismutase within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Zn501
b:14.0
occ:1.00
|
OD1
|
B:ASP84
|
1.9
|
13.5
|
1.0
|
|
ND1
|
B:HIS64
|
2.0
|
13.2
|
1.0
|
|
ND1
|
B:HIS72
|
2.0
|
12.1
|
1.0
|
|
ND1
|
B:HIS81
|
2.0
|
14.3
|
1.0
|
|
CG
|
B:ASP84
|
2.7
|
13.5
|
1.0
|
|
CE1
|
B:HIS72
|
2.9
|
14.0
|
1.0
|
|
OD2
|
B:ASP84
|
2.9
|
12.1
|
1.0
|
|
CE1
|
B:HIS64
|
2.9
|
15.4
|
1.0
|
|
CE1
|
B:HIS81
|
2.9
|
15.3
|
1.0
|
|
CG
|
B:HIS64
|
3.0
|
14.0
|
1.0
|
|
CG
|
B:HIS81
|
3.1
|
14.1
|
1.0
|
|
CG
|
B:HIS72
|
3.1
|
15.0
|
1.0
|
|
CB
|
B:HIS64
|
3.3
|
14.7
|
1.0
|
|
CB
|
B:HIS81
|
3.5
|
13.7
|
1.0
|
|
CB
|
B:HIS72
|
3.5
|
13.6
|
1.0
|
|
O
|
B:LYS137
|
3.8
|
17.5
|
1.0
|
|
CA
|
B:HIS72
|
3.9
|
12.3
|
1.0
|
|
NE2
|
B:HIS64
|
4.0
|
19.3
|
1.0
|
|
NE2
|
B:HIS72
|
4.0
|
13.0
|
1.0
|
|
NE2
|
B:HIS81
|
4.1
|
13.7
|
1.0
|
|
CD2
|
B:HIS64
|
4.1
|
19.0
|
1.0
|
|
CB
|
B:ASP84
|
4.1
|
14.2
|
1.0
|
|
CD2
|
B:HIS81
|
4.2
|
11.6
|
1.0
|
|
CD2
|
B:HIS72
|
4.2
|
12.5
|
1.0
|
|
CA
|
B:ASP84
|
4.6
|
14.1
|
1.0
|
|
N
|
B:HIS81
|
4.6
|
14.7
|
1.0
|
|
CA
|
B:HIS81
|
4.7
|
13.0
|
1.0
|
|
N
|
B:GLY73
|
4.7
|
12.6
|
1.0
|
|
O
|
B:HOH720
|
4.7
|
18.2
|
1.0
|
|
N
|
B:ASP84
|
4.8
|
12.8
|
1.0
|
|
C
|
B:LYS137
|
4.8
|
17.0
|
1.0
|
|
C
|
B:HIS72
|
4.8
|
13.5
|
1.0
|
|
N
|
B:HIS72
|
4.9
|
13.4
|
1.0
|
|
CA
|
B:HIS64
|
4.9
|
13.3
|
1.0
|
|
Zinc binding site 3 out
of 8 in 6zs1
Go back to
Zinc Binding Sites List in 6zs1
Zinc binding site 3 out
of 8 in the Chaetomium Thermophilum Cuzn-Superoxide Dismutase
 Mono view
 Stereo pair view
|
|
A full contact list of Zinc with other atoms in the Zn binding
site number 3 of Chaetomium Thermophilum Cuzn-Superoxide Dismutase within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Zn501
b:16.7
occ:1.00
|
OD1
|
C:ASP84
|
2.0
|
14.4
|
1.0
|
|
ND1
|
C:HIS64
|
2.0
|
18.4
|
1.0
|
|
ND1
|
C:HIS81
|
2.0
|
15.3
|
1.0
|
|
ND1
|
C:HIS72
|
2.1
|
16.6
|
1.0
|
|
CG
|
C:ASP84
|
2.7
|
15.9
|
1.0
|
|
CE1
|
C:HIS81
|
2.9
|
17.6
|
1.0
|
|
OD2
|
C:ASP84
|
2.9
|
16.1
|
1.0
|
|
CE1
|
C:HIS72
|
2.9
|
14.5
|
1.0
|
|
CG
|
C:HIS64
|
3.0
|
18.3
|
1.0
|
|
CE1
|
C:HIS64
|
3.0
|
20.2
|
1.0
|
|
CG
|
C:HIS81
|
3.1
|
15.3
|
1.0
|
|
CG
|
C:HIS72
|
3.2
|
18.4
|
1.0
|
|
CB
|
C:HIS64
|
3.3
|
18.8
|
1.0
|
|
CB
|
C:HIS81
|
3.5
|
13.6
|
1.0
|
|
CB
|
C:HIS72
|
3.6
|
15.6
|
1.0
|
|
O
|
C:LYS137
|
3.8
|
23.0
|
1.0
|
|
CA
|
C:HIS72
|
3.9
|
12.9
|
1.0
|
|
NE2
|
C:HIS81
|
4.0
|
15.4
|
1.0
|
|
NE2
|
C:HIS64
|
4.1
|
21.3
|
1.0
|
|
NE2
|
C:HIS72
|
4.1
|
19.7
|
1.0
|
|
CD2
|
C:HIS64
|
4.1
|
17.4
|
1.0
|
|
CD2
|
C:HIS81
|
4.1
|
20.9
|
1.0
|
|
CB
|
C:ASP84
|
4.1
|
14.5
|
1.0
|
|
CD2
|
C:HIS72
|
4.2
|
18.4
|
1.0
|
|
CA
|
C:ASP84
|
4.6
|
12.9
|
1.0
|
|
N
|
C:HIS81
|
4.7
|
18.1
|
1.0
|
|
N
|
C:GLY73
|
4.8
|
16.6
|
1.0
|
|
CA
|
C:HIS81
|
4.8
|
14.1
|
1.0
|
|
O
|
C:HOH677
|
4.8
|
22.0
|
1.0
|
|
C
|
C:LYS137
|
4.8
|
21.7
|
1.0
|
|
CA
|
C:HIS64
|
4.8
|
15.4
|
1.0
|
|
C
|
C:HIS72
|
4.9
|
19.6
|
1.0
|
|
N
|
C:HIS72
|
4.9
|
14.7
|
1.0
|
|
N
|
C:ASP84
|
4.9
|
12.6
|
1.0
|
|
CD2
|
C:HIS47
|
4.9
|
20.1
|
1.0
|
|
Zinc binding site 4 out
of 8 in 6zs1
Go back to
Zinc Binding Sites List in 6zs1
Zinc binding site 4 out
of 8 in the Chaetomium Thermophilum Cuzn-Superoxide Dismutase
 Mono view
 Stereo pair view
|
|
A full contact list of Zinc with other atoms in the Zn binding
site number 4 of Chaetomium Thermophilum Cuzn-Superoxide Dismutase within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Zn501
b:16.9
occ:1.00
|
ND1
|
D:HIS64
|
1.9
|
16.3
|
1.0
|
|
OD1
|
D:ASP84
|
2.0
|
15.2
|
1.0
|
|
ND1
|
D:HIS81
|
2.0
|
15.1
|
1.0
|
|
ND1
|
D:HIS72
|
2.1
|
15.7
|
1.0
|
|
CG
|
D:ASP84
|
2.7
|
15.3
|
1.0
|
|
OD2
|
D:ASP84
|
2.9
|
15.0
|
1.0
|
|
CE1
|
D:HIS81
|
2.9
|
15.7
|
1.0
|
|
CE1
|
D:HIS64
|
2.9
|
22.0
|
1.0
|
|
CG
|
D:HIS64
|
2.9
|
18.3
|
1.0
|
|
CE1
|
D:HIS72
|
3.0
|
14.8
|
1.0
|
|
CG
|
D:HIS81
|
3.1
|
15.8
|
1.0
|
|
CG
|
D:HIS72
|
3.2
|
19.2
|
1.0
|
|
CB
|
D:HIS64
|
3.3
|
20.1
|
1.0
|
|
CB
|
D:HIS81
|
3.5
|
13.8
|
1.0
|
|
CB
|
D:HIS72
|
3.6
|
14.9
|
1.0
|
|
O
|
D:LYS137
|
3.8
|
21.4
|
1.0
|
|
CA
|
D:HIS72
|
3.9
|
13.9
|
1.0
|
|
NE2
|
D:HIS81
|
4.0
|
16.7
|
1.0
|
|
NE2
|
D:HIS64
|
4.0
|
21.1
|
1.0
|
|
CD2
|
D:HIS64
|
4.1
|
16.9
|
1.0
|
|
CD2
|
D:HIS81
|
4.1
|
21.5
|
1.0
|
|
NE2
|
D:HIS72
|
4.1
|
18.2
|
1.0
|
|
CB
|
D:ASP84
|
4.1
|
14.0
|
1.0
|
|
CD2
|
D:HIS72
|
4.3
|
18.9
|
1.0
|
|
CA
|
D:ASP84
|
4.6
|
12.2
|
1.0
|
|
N
|
D:HIS81
|
4.7
|
17.3
|
1.0
|
|
CA
|
D:HIS81
|
4.7
|
15.4
|
1.0
|
|
O
|
D:HOH668
|
4.7
|
23.3
|
1.0
|
|
N
|
D:GLY73
|
4.7
|
17.7
|
1.0
|
|
C
|
D:LYS137
|
4.8
|
20.1
|
1.0
|
|
CA
|
D:HIS64
|
4.8
|
17.9
|
1.0
|
|
C
|
D:HIS72
|
4.8
|
19.8
|
1.0
|
|
N
|
D:HIS72
|
4.9
|
16.8
|
1.0
|
|
N
|
D:ASP84
|
4.9
|
14.2
|
1.0
|
|
CD2
|
D:HIS47
|
4.9
|
21.2
|
1.0
|
|
Zinc binding site 5 out
of 8 in 6zs1
Go back to
Zinc Binding Sites List in 6zs1
Zinc binding site 5 out
of 8 in the Chaetomium Thermophilum Cuzn-Superoxide Dismutase
 Mono view
 Stereo pair view
|
|
A full contact list of Zinc with other atoms in the Zn binding
site number 5 of Chaetomium Thermophilum Cuzn-Superoxide Dismutase within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Zn501
b:17.9
occ:1.00
|
OD1
|
E:ASP84
|
1.9
|
16.5
|
1.0
|
|
ND1
|
E:HIS64
|
1.9
|
16.8
|
1.0
|
|
ND1
|
E:HIS81
|
2.0
|
17.0
|
1.0
|
|
ND1
|
E:HIS72
|
2.1
|
19.0
|
1.0
|
|
CG
|
E:ASP84
|
2.7
|
18.7
|
1.0
|
|
OD2
|
E:ASP84
|
2.8
|
17.7
|
1.0
|
|
CE1
|
E:HIS64
|
2.9
|
21.7
|
1.0
|
|
CE1
|
E:HIS81
|
2.9
|
17.1
|
1.0
|
|
CE1
|
E:HIS72
|
2.9
|
18.1
|
1.0
|
|
CG
|
E:HIS64
|
3.0
|
21.6
|
1.0
|
|
CG
|
E:HIS81
|
3.0
|
17.5
|
1.0
|
|
CG
|
E:HIS72
|
3.2
|
21.0
|
1.0
|
|
CB
|
E:HIS64
|
3.4
|
16.9
|
1.0
|
|
CB
|
E:HIS81
|
3.5
|
15.9
|
1.0
|
|
CB
|
E:HIS72
|
3.6
|
15.9
|
1.0
|
|
O
|
E:LYS137
|
3.7
|
23.7
|
1.0
|
|
CA
|
E:HIS72
|
3.9
|
19.2
|
1.0
|
|
NE2
|
E:HIS81
|
4.0
|
16.8
|
1.0
|
|
NE2
|
E:HIS64
|
4.0
|
20.2
|
1.0
|
|
CD2
|
E:HIS64
|
4.1
|
19.0
|
1.0
|
|
CD2
|
E:HIS81
|
4.1
|
20.0
|
1.0
|
|
CB
|
E:ASP84
|
4.1
|
17.2
|
1.0
|
|
NE2
|
E:HIS72
|
4.1
|
18.7
|
1.0
|
|
CD2
|
E:HIS72
|
4.3
|
19.5
|
1.0
|
|
CA
|
E:ASP84
|
4.6
|
14.8
|
1.0
|
|
N
|
E:HIS81
|
4.6
|
15.6
|
1.0
|
|
CA
|
E:HIS81
|
4.7
|
18.8
|
1.0
|
|
C
|
E:LYS137
|
4.7
|
20.1
|
1.0
|
|
N
|
E:GLY73
|
4.7
|
20.7
|
1.0
|
|
N
|
E:ASP84
|
4.8
|
15.9
|
1.0
|
|
O
|
E:HOH675
|
4.8
|
24.1
|
1.0
|
|
C
|
E:HIS72
|
4.8
|
23.1
|
1.0
|
|
N
|
E:HIS72
|
4.9
|
17.1
|
1.0
|
|
CA
|
E:HIS64
|
4.9
|
15.5
|
1.0
|
|
CD2
|
E:HIS47
|
5.0
|
20.9
|
1.0
|
|
CA
|
E:THR138
|
5.0
|
19.5
|
1.0
|
|
Zinc binding site 6 out
of 8 in 6zs1
Go back to
Zinc Binding Sites List in 6zs1
Zinc binding site 6 out
of 8 in the Chaetomium Thermophilum Cuzn-Superoxide Dismutase
 Mono view
 Stereo pair view
|
|
A full contact list of Zinc with other atoms in the Zn binding
site number 6 of Chaetomium Thermophilum Cuzn-Superoxide Dismutase within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
F:Zn501
b:18.4
occ:1.00
|
OD1
|
F:ASP84
|
1.9
|
19.0
|
1.0
|
|
ND1
|
F:HIS64
|
2.0
|
17.0
|
1.0
|
|
ND1
|
F:HIS81
|
2.0
|
16.0
|
1.0
|
|
ND1
|
F:HIS72
|
2.1
|
18.6
|
1.0
|
|
CG
|
F:ASP84
|
2.7
|
17.4
|
1.0
|
|
CE1
|
F:HIS81
|
2.8
|
16.9
|
1.0
|
|
OD2
|
F:ASP84
|
2.8
|
17.5
|
1.0
|
|
CE1
|
F:HIS72
|
2.9
|
18.3
|
1.0
|
|
CE1
|
F:HIS64
|
2.9
|
22.2
|
1.0
|
|
CG
|
F:HIS64
|
3.0
|
19.9
|
1.0
|
|
CG
|
F:HIS81
|
3.0
|
17.1
|
1.0
|
|
CG
|
F:HIS72
|
3.2
|
22.7
|
1.0
|
|
CB
|
F:HIS64
|
3.4
|
16.2
|
1.0
|
|
CB
|
F:HIS81
|
3.5
|
15.0
|
1.0
|
|
CB
|
F:HIS72
|
3.7
|
19.0
|
1.0
|
|
O
|
F:LYS137
|
3.8
|
24.3
|
1.0
|
|
CA
|
F:HIS72
|
3.9
|
17.8
|
1.0
|
|
NE2
|
F:HIS81
|
4.0
|
18.0
|
1.0
|
|
NE2
|
F:HIS64
|
4.0
|
21.0
|
1.0
|
|
NE2
|
F:HIS72
|
4.1
|
19.5
|
1.0
|
|
CD2
|
F:HIS81
|
4.1
|
19.8
|
1.0
|
|
CD2
|
F:HIS64
|
4.1
|
19.6
|
1.0
|
|
CB
|
F:ASP84
|
4.1
|
15.6
|
1.0
|
|
CD2
|
F:HIS72
|
4.2
|
21.1
|
1.0
|
|
CA
|
F:ASP84
|
4.6
|
17.5
|
1.0
|
|
N
|
F:HIS81
|
4.7
|
15.1
|
1.0
|
|
CA
|
F:HIS81
|
4.7
|
18.7
|
1.0
|
|
N
|
F:GLY73
|
4.7
|
18.5
|
1.0
|
|
C
|
F:LYS137
|
4.7
|
22.3
|
1.0
|
|
N
|
F:ASP84
|
4.8
|
17.3
|
1.0
|
|
C
|
F:HIS72
|
4.8
|
20.0
|
1.0
|
|
CA
|
F:HIS64
|
4.9
|
17.9
|
1.0
|
|
N
|
F:HIS72
|
4.9
|
17.5
|
1.0
|
|
CD2
|
F:HIS47
|
4.9
|
24.8
|
1.0
|
|
O
|
F:HOH700
|
4.9
|
27.4
|
1.0
|
|
CA
|
F:THR138
|
5.0
|
19.8
|
1.0
|
|
Zinc binding site 7 out
of 8 in 6zs1
Go back to
Zinc Binding Sites List in 6zs1
Zinc binding site 7 out
of 8 in the Chaetomium Thermophilum Cuzn-Superoxide Dismutase
 Mono view
 Stereo pair view
|
|
A full contact list of Zinc with other atoms in the Zn binding
site number 7 of Chaetomium Thermophilum Cuzn-Superoxide Dismutase within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
G:Zn501
b:13.9
occ:1.00
|
OD1
|
G:ASP84
|
1.9
|
13.4
|
1.0
|
|
ND1
|
G:HIS81
|
2.0
|
13.3
|
1.0
|
|
ND1
|
G:HIS64
|
2.0
|
16.0
|
1.0
|
|
ND1
|
G:HIS72
|
2.0
|
13.0
|
1.0
|
|
CG
|
G:ASP84
|
2.7
|
13.0
|
1.0
|
|
OD2
|
G:ASP84
|
2.9
|
12.7
|
1.0
|
|
CE1
|
G:HIS72
|
2.9
|
12.8
|
1.0
|
|
CE1
|
G:HIS81
|
2.9
|
12.6
|
1.0
|
|
CE1
|
G:HIS64
|
3.0
|
16.4
|
1.0
|
|
CG
|
G:HIS64
|
3.0
|
14.8
|
1.0
|
|
CG
|
G:HIS81
|
3.1
|
11.7
|
1.0
|
|
CG
|
G:HIS72
|
3.1
|
12.8
|
1.0
|
|
CB
|
G:HIS64
|
3.4
|
14.6
|
1.0
|
|
CB
|
G:HIS81
|
3.5
|
13.0
|
1.0
|
|
CB
|
G:HIS72
|
3.6
|
11.8
|
1.0
|
|
O
|
G:LYS137
|
3.8
|
16.1
|
1.0
|
|
CA
|
G:HIS72
|
3.9
|
12.4
|
1.0
|
|
NE2
|
G:HIS81
|
4.0
|
12.6
|
1.0
|
|
NE2
|
G:HIS72
|
4.1
|
14.8
|
1.0
|
|
NE2
|
G:HIS64
|
4.1
|
20.6
|
1.0
|
|
CD2
|
G:HIS81
|
4.1
|
13.4
|
1.0
|
|
CB
|
G:ASP84
|
4.1
|
12.2
|
1.0
|
|
CD2
|
G:HIS64
|
4.2
|
19.3
|
1.0
|
|
CD2
|
G:HIS72
|
4.2
|
15.0
|
1.0
|
|
CA
|
G:ASP84
|
4.6
|
15.4
|
1.0
|
|
N
|
G:HIS81
|
4.6
|
14.4
|
1.0
|
|
CA
|
G:HIS81
|
4.7
|
13.9
|
1.0
|
|
N
|
G:GLY73
|
4.7
|
13.8
|
1.0
|
|
N
|
G:ASP84
|
4.8
|
13.0
|
1.0
|
|
C
|
G:LYS137
|
4.8
|
14.3
|
1.0
|
|
C
|
G:HIS72
|
4.8
|
15.6
|
1.0
|
|
O
|
G:HOH711
|
4.8
|
21.2
|
1.0
|
|
N
|
G:HIS72
|
4.9
|
13.2
|
1.0
|
|
CA
|
G:HIS64
|
4.9
|
13.2
|
1.0
|
|
Zinc binding site 8 out
of 8 in 6zs1
Go back to
Zinc Binding Sites List in 6zs1
Zinc binding site 8 out
of 8 in the Chaetomium Thermophilum Cuzn-Superoxide Dismutase
 Mono view
 Stereo pair view
|
|
A full contact list of Zinc with other atoms in the Zn binding
site number 8 of Chaetomium Thermophilum Cuzn-Superoxide Dismutase within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
H:Zn501
b:13.7
occ:1.00
|
OD1
|
H:ASP84
|
2.0
|
13.8
|
1.0
|
|
ND1
|
H:HIS64
|
2.0
|
15.9
|
1.0
|
|
ND1
|
H:HIS81
|
2.0
|
13.5
|
1.0
|
|
ND1
|
H:HIS72
|
2.0
|
12.1
|
1.0
|
|
CG
|
H:ASP84
|
2.7
|
13.1
|
1.0
|
|
OD2
|
H:ASP84
|
2.9
|
13.1
|
1.0
|
|
CE1
|
H:HIS72
|
2.9
|
12.9
|
1.0
|
|
CE1
|
H:HIS81
|
2.9
|
13.3
|
1.0
|
|
CE1
|
H:HIS64
|
2.9
|
15.2
|
1.0
|
|
CG
|
H:HIS64
|
3.0
|
13.7
|
1.0
|
|
CG
|
H:HIS81
|
3.1
|
11.7
|
1.0
|
|
CG
|
H:HIS72
|
3.1
|
12.5
|
1.0
|
|
CB
|
H:HIS64
|
3.4
|
13.3
|
1.0
|
|
CB
|
H:HIS81
|
3.5
|
12.1
|
1.0
|
|
CB
|
H:HIS72
|
3.6
|
11.1
|
1.0
|
|
O
|
H:LYS137
|
3.8
|
16.9
|
1.0
|
|
CA
|
H:HIS72
|
3.8
|
11.2
|
1.0
|
|
NE2
|
H:HIS81
|
4.0
|
14.0
|
1.0
|
|
NE2
|
H:HIS72
|
4.1
|
15.8
|
1.0
|
|
NE2
|
H:HIS64
|
4.1
|
19.2
|
1.0
|
|
CD2
|
H:HIS64
|
4.1
|
17.0
|
1.0
|
|
CD2
|
H:HIS81
|
4.1
|
13.1
|
1.0
|
|
CB
|
H:ASP84
|
4.1
|
13.0
|
1.0
|
|
CD2
|
H:HIS72
|
4.2
|
13.7
|
1.0
|
|
CA
|
H:ASP84
|
4.6
|
14.4
|
1.0
|
|
N
|
H:HIS81
|
4.6
|
14.2
|
1.0
|
|
N
|
H:GLY73
|
4.6
|
12.9
|
1.0
|
|
CA
|
H:HIS81
|
4.7
|
12.1
|
1.0
|
|
C
|
H:HIS72
|
4.8
|
16.2
|
1.0
|
|
C
|
H:LYS137
|
4.8
|
17.6
|
1.0
|
|
O
|
H:HOH692
|
4.8
|
20.0
|
1.0
|
|
N
|
H:ASP84
|
4.8
|
14.3
|
1.0
|
|
N
|
H:HIS72
|
4.9
|
12.8
|
1.0
|
|
CA
|
H:HIS64
|
4.9
|
13.9
|
1.0
|
|
Reference:
I.Mohsin,
L.Q.Zhang,
D.C.Li,
A.C.Papageorgiou.
Crystal Structure of A Cu,Zn Superoxide Dismutase From the Thermophilic Fungus Chaetomium Thermophilum. Protein Pept.Lett. 2021.
ISSN: ISSN 0929-8665
PubMed: 33726638
DOI: 10.2174/0929866528666210316104919
Page generated: Sat Apr 17 17:45:50 2021
|
