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Zinc in PDB, part 492 (files: 19641-19680), PDB 8cx9-8dat

Experimental structures of coordination spheres of Zinc (Zn) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Zinc atoms. PDB files: 19641-19680 (PDB 8cx9-8dat).
  1. 8cx9 (Zn: 4) - Structure of the Sars-COV2 Plpro (C111S) in Complex with A Dimeric Ubv That Inhibits Activity By An Unusual Allosteric Mechanism
    Other atoms: Na (2); Br (6); Cl (1);
  2. 8czk (Zn: 2) - Human LANCL1 Bound to Gsh and Dhb-Erk Peptide
  3. 8czl (Zn: 2) - Human LANCL1 Bound to Methyl Glutathione (Megsh)
  4. 8d0a (Zn: 1) - Crystal Structure of Human USP30 in Complex with A Covalent Inhibitor 829 and A Fab
    Other atoms: Cl (1);
  5. 8d0v (Zn: 2) - Human LANCL1 C264A Mutant Bound to Gsh
  6. 8d19 (Zn: 2) - Human LANCL1 Bound to Gsh
  7. 8d1t (Zn: 1) - Crystal Structure of Human USP30 in Complex with A Covalent Inhibitor 552 and A Fab
    Other atoms: Cl (1);
  8. 8d1v (Zn: 4) - Cryo-Em Structure of Guide Rna and Target Rna Bound CAS7-11
  9. 8d2z (Zn: 2) - Crystal Structure of A Metallo-Beta-Lactamase Superfamily Protein From Burkholderia Cenocepacia
    Other atoms: Cl (2);
  10. 8d4a (Zn: 1) - CAS12A2 Quaternary Complex
    Other atoms: Mg (2);
  11. 8d4t (Zn: 1) - Mammalian Civ with Gdn Bound
    Other atoms: Mg (1); Na (1); Cu (3); Fe (2);
  12. 8d4x (Zn: 6) - Structure of the Human UBR5 Hect-Type E3 Ubiquitin Ligase in A Dimeric Form
  13. 8d51 (Zn: 1) - Parathyroid Hormone 1 Receptor Extracellular Domain Complexed with A Peptide Ligand Containing Beta-3-Homotryptophan
  14. 8d52 (Zn: 1) - Parathyroid Hormone 1 Receptor Extracellular Domain Complexed with A Peptide Ligand Containing (2-Naphthyl)-Beta-3-Homoalanine
  15. 8d7u (Zn: 1) - Cereblon~DDB1 Bound to Cc-92480 with DDB1 in the Linear Conformation
    Other atoms: F (1);
  16. 8d7v (Zn: 1) - Cereblon~DDB1 Bound to Cc-92480 with DDB1 in the Twisted Conformation
    Other atoms: F (1);
  17. 8d7w (Zn: 1) - Cereblon~DDB1 Bound to Cc-92480 with DDB1 in the Hinged Conformation
    Other atoms: F (1);
  18. 8d7x (Zn: 1) - Cereblon~DDB1 in the Apo Form with DDB1 in the Hinged Conformation
  19. 8d7y (Zn: 1) - Cereblon-DDB1 in the Apo Form with DDB1 in the Twisted Conformation
  20. 8d7z (Zn: 2) - Cereblon-DDB1 Bound to Cc-92480 and Ikaros ZF1-2-3
    Other atoms: F (1);
  21. 8d80 (Zn: 2) - Cereblon~DDB1 Bound to Iberdomide and Ikaros ZF1-2-3
  22. 8d81 (Zn: 1) - Cereblon~DDB1 Bound to Pomalidomide
  23. 8d8n (Zn: 4) - Gramp Non-Match Pfs Target Rna
  24. 8d8o (Zn: 1) - Cryo-Em Structure of Substrate Unbound Papp-A
  25. 8d97 (Zn: 4) - Apo Gramp
  26. 8d98 (Zn: 2) - Crystal Structure of Danio Rerio Histone Deacetylase 6 Catalytic Domain 2 Complexed with Fluorinated Inhibitor 5
    Other atoms: F (4); K (4);
  27. 8d99 (Zn: 2) - Crystal Structure of Danio Rerio Histone Deacetylase 6 Catalytic Domain 2 Complexed with Fluorinated Inhibitor 7
    Other atoms: K (4); F (3);
  28. 8d9a (Zn: 2) - Crystal Structure of Danio Rerio Histone Deacetylase 6 Catalytic Domain 2 Complexed with Fluorinated Inhibitor 8
    Other atoms: K (4); F (6);
  29. 8d9b (Zn: 2) - Crystal Structure of Danio Rerio Histone Deacetylase 6 Catalytic Domain 2 Complexed with Fluorinated Inhibitor 9
    Other atoms: K (4); F (8);
  30. 8d9c (Zn: 2) - Crystal Structure of Danio Rerio Histone Deacetylase 6 Catalytic Domain 2 Complexed with Fluorinated Inhibitor 10
    Other atoms: F (10); K (4);
  31. 8d9d (Zn: 3) - Human Dna Polymerase-Alpha/Primase Elongation Complex II Bound to Primer/Template
    Other atoms: Mg (2); Fe (4);
  32. 8d9e (Zn: 4) - Gramp-Match Pfs Target
  33. 8d9f (Zn: 4) - Gramp-Tpr-Chat (Craspase)
  34. 8d9g (Zn: 4) - Gramp-Tpr-Chat Non Match Pfs Target Rna(Craspase)
  35. 8d9h (Zn: 4) - Gramp-Tpr-Chat Match Pfs Target Rna(Craspase)
  36. 8d9i (Zn: 4) - Gramp Non-Matching Pfs-with Mg
  37. 8da0 (Zn: 18) - Crystal Structure of Mamba Alpha-Neurotoxin in Complex with Centi- 3FTX-D09 Antibody
  38. 8dar (Zn: 2) - Saccharomyces Cerevisiae UFD1/NPL4/CDC48 Complex Unbound But in the Presence of Sumo-Ubiquitin(K48POLYUB)-Meos and Atp
  39. 8das (Zn: 2) - Saccharomyces Cerevisiae UFD1/NPL4/CDC48 Complex Bound to Two Ubiquitin Moieties in Presence of Sumo-Ubiquitin(K48POLYUB)-Meos and Atp, State 1 (Inta)
  40. 8dat (Zn: 2) - Saccharomyces Cerevisiae UFD1/NPL4/CDC48 Complex Bound to Three Ubiquitin Moieties in Presence of Sumo-Ubiquitin(K48POLYUB)-Meos and Atp, State 1 (Intb)
Page generated: Thu Dec 28 12:57:08 2023

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