Zinc in PDB 7zep: Human SLFN11 E209A Dimer
Zinc Binding Sites:
The binding sites of Zinc atom in the Human SLFN11 E209A Dimer
(pdb code 7zep). This binding sites where shown within
5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the
Human SLFN11 E209A Dimer, PDB code: 7zep:
Jump to Zinc binding site number:
1;
2;
Zinc binding site 1 out
of 2 in 7zep
Go back to
Zinc Binding Sites List in 7zep
Zinc binding site 1 out
of 2 in the Human SLFN11 E209A Dimer
 Mono view
 Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 1 of Human SLFN11 E209A Dimer within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn1001
b:92.4
occ:1.00
|
SG
|
A:CYS321
|
2.3
|
56.9
|
1.0
|
ND1
|
A:HIS285
|
2.3
|
64.1
|
1.0
|
SG
|
A:CYS287
|
2.3
|
77.7
|
1.0
|
SG
|
A:CYS322
|
2.8
|
53.2
|
1.0
|
CE1
|
A:HIS285
|
3.1
|
64.1
|
1.0
|
CG
|
A:HIS285
|
3.4
|
64.1
|
1.0
|
O
|
A:PRO289
|
3.6
|
83.6
|
1.0
|
CB
|
A:CYS321
|
3.6
|
56.9
|
1.0
|
CB
|
A:HIS285
|
3.8
|
64.1
|
1.0
|
CB
|
A:CYS322
|
3.9
|
53.2
|
1.0
|
CB
|
A:CYS287
|
3.9
|
77.7
|
1.0
|
N
|
A:CYS287
|
4.2
|
77.7
|
1.0
|
O
|
A:CYS287
|
4.2
|
77.7
|
1.0
|
CA
|
A:HIS285
|
4.3
|
64.1
|
1.0
|
C
|
A:CYS321
|
4.3
|
56.9
|
1.0
|
NE2
|
A:HIS285
|
4.3
|
64.1
|
1.0
|
CA
|
A:CYS287
|
4.4
|
77.7
|
1.0
|
N
|
A:PHE286
|
4.4
|
64.0
|
1.0
|
N
|
A:CYS322
|
4.4
|
53.2
|
1.0
|
CD2
|
A:HIS285
|
4.5
|
64.1
|
1.0
|
O
|
A:CYS321
|
4.5
|
56.9
|
1.0
|
C
|
A:CYS287
|
4.5
|
77.7
|
1.0
|
CA
|
A:CYS321
|
4.5
|
56.9
|
1.0
|
CA
|
A:GLN290
|
4.6
|
76.2
|
1.0
|
C
|
A:PRO289
|
4.7
|
83.6
|
1.0
|
CA
|
A:CYS322
|
4.8
|
53.2
|
1.0
|
C
|
A:HIS285
|
4.8
|
64.1
|
1.0
|
|
Zinc binding site 2 out
of 2 in 7zep
Go back to
Zinc Binding Sites List in 7zep
Zinc binding site 2 out
of 2 in the Human SLFN11 E209A Dimer
 Mono view
 Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 2 of Human SLFN11 E209A Dimer within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Zn1001
b:91.5
occ:1.00
|
ND1
|
B:HIS285
|
2.1
|
65.8
|
1.0
|
SG
|
B:CYS321
|
2.3
|
56.6
|
1.0
|
SG
|
B:CYS322
|
2.3
|
53.6
|
1.0
|
SG
|
B:CYS287
|
2.3
|
80.2
|
1.0
|
CE1
|
B:HIS285
|
2.7
|
65.8
|
1.0
|
CG
|
B:HIS285
|
3.3
|
65.8
|
1.0
|
CB
|
B:CYS321
|
3.3
|
56.6
|
1.0
|
CB
|
B:CYS322
|
3.6
|
53.6
|
1.0
|
CB
|
B:CYS287
|
3.8
|
80.2
|
1.0
|
NE2
|
B:HIS285
|
3.9
|
65.8
|
1.0
|
CB
|
B:HIS285
|
4.0
|
65.8
|
1.0
|
C
|
B:CYS321
|
4.0
|
56.6
|
1.0
|
O
|
B:PRO289
|
4.1
|
87.4
|
1.0
|
N
|
B:CYS322
|
4.1
|
53.6
|
1.0
|
N
|
B:CYS287
|
4.2
|
80.2
|
1.0
|
O
|
B:CYS321
|
4.2
|
56.6
|
1.0
|
CA
|
B:CYS321
|
4.3
|
56.6
|
1.0
|
CD2
|
B:HIS285
|
4.3
|
65.8
|
1.0
|
N
|
B:PHE286
|
4.3
|
63.6
|
1.0
|
CA
|
B:HIS285
|
4.3
|
65.8
|
1.0
|
O
|
B:CYS287
|
4.4
|
80.2
|
1.0
|
CA
|
B:CYS287
|
4.4
|
80.2
|
1.0
|
CA
|
B:CYS322
|
4.5
|
53.6
|
1.0
|
C
|
B:CYS287
|
4.7
|
80.2
|
1.0
|
C
|
B:HIS285
|
4.8
|
65.8
|
1.0
|
N
|
B:CYS321
|
5.0
|
56.6
|
1.0
|
|
Reference:
F.J.Metzner,
S.J.Wenzl,
M.Kugler,
S.Krebs,
K.P.Hopfner,
K.Lammens.
Mechanistic Understanding of Human SLFN11. Nat Commun V. 13 5464 2022.
ISSN: ESSN 2041-1723
PubMed: 36115853
DOI: 10.1038/S41467-022-33123-0
Page generated: Wed Oct 30 16:24:56 2024
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