Zinc in PDB 7zez: Rna Binding Induces An Allosteric Switch in CYP33 to Repress MLL1 Mediated Transcription Regulation
Enzymatic activity of Rna Binding Induces An Allosteric Switch in CYP33 to Repress MLL1 Mediated Transcription Regulation
All present enzymatic activity of Rna Binding Induces An Allosteric Switch in CYP33 to Repress MLL1 Mediated Transcription Regulation:
5.2.1.8;
Zinc Binding Sites:
The binding sites of Zinc atom in the Rna Binding Induces An Allosteric Switch in CYP33 to Repress MLL1 Mediated Transcription Regulation
(pdb code 7zez). This binding sites where shown within
5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the
Rna Binding Induces An Allosteric Switch in CYP33 to Repress MLL1 Mediated Transcription Regulation, PDB code: 7zez:
Jump to Zinc binding site number:
1;
2;
Zinc binding site 1 out
of 2 in 7zez
Go back to
Zinc Binding Sites List in 7zez
Zinc binding site 1 out
of 2 in the Rna Binding Induces An Allosteric Switch in CYP33 to Repress MLL1 Mediated Transcription Regulation
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 1 of Rna Binding Induces An Allosteric Switch in CYP33 to Repress MLL1 Mediated Transcription Regulation within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Zn1701
b:0.0
occ:1.00
|
ND1
|
B:HIS1596
|
2.0
|
0.0
|
1.0
|
SG
|
B:CYS1569
|
2.3
|
0.0
|
1.0
|
SG
|
B:CYS1599
|
2.3
|
0.0
|
1.0
|
SG
|
B:CYS1572
|
2.3
|
0.0
|
1.0
|
CE1
|
B:HIS1596
|
3.0
|
0.0
|
1.0
|
HB2
|
B:HIS1596
|
3.0
|
0.0
|
1.0
|
CG
|
B:HIS1596
|
3.1
|
0.0
|
1.0
|
H
|
B:HIS1596
|
3.2
|
0.0
|
1.0
|
HE1
|
B:HIS1596
|
3.2
|
0.0
|
1.0
|
HB3
|
B:CYS1599
|
3.3
|
0.0
|
1.0
|
CB
|
B:CYS1569
|
3.3
|
0.0
|
1.0
|
HB2
|
B:CYS1569
|
3.4
|
0.0
|
1.0
|
CB
|
B:CYS1599
|
3.4
|
0.0
|
1.0
|
HB3
|
B:CYS1569
|
3.5
|
0.0
|
1.0
|
CB
|
B:CYS1572
|
3.5
|
0.0
|
1.0
|
HB3
|
B:CYS1572
|
3.5
|
0.0
|
1.0
|
H
|
B:CYS1572
|
3.5
|
0.0
|
1.0
|
CB
|
B:HIS1596
|
3.6
|
0.0
|
1.0
|
HB2
|
B:CYS1599
|
3.8
|
0.0
|
1.0
|
HB2
|
B:LYS1574
|
3.8
|
0.0
|
1.0
|
N
|
B:CYS1572
|
3.8
|
0.0
|
1.0
|
HE2
|
B:LYS1574
|
3.9
|
0.0
|
1.0
|
HB2
|
B:LEU1571
|
4.0
|
0.0
|
1.0
|
HZ2
|
B:LYS1574
|
4.0
|
0.0
|
1.0
|
HZ3
|
B:LYS1574
|
4.0
|
0.0
|
1.0
|
N
|
B:HIS1596
|
4.0
|
0.0
|
1.0
|
H
|
B:LEU1571
|
4.1
|
0.0
|
1.0
|
CA
|
B:CYS1572
|
4.1
|
0.0
|
1.0
|
NE2
|
B:HIS1596
|
4.2
|
0.0
|
1.0
|
CD2
|
B:HIS1596
|
4.2
|
0.0
|
1.0
|
H
|
B:CYS1599
|
4.3
|
0.0
|
1.0
|
HB2
|
B:CYS1572
|
4.4
|
0.0
|
1.0
|
CA
|
B:HIS1596
|
4.4
|
0.0
|
1.0
|
NZ
|
B:LYS1574
|
4.4
|
0.0
|
1.0
|
HB3
|
B:HIS1596
|
4.4
|
0.0
|
1.0
|
H
|
B:LYS1574
|
4.5
|
0.0
|
1.0
|
C
|
B:LEU1571
|
4.5
|
0.0
|
1.0
|
HG23
|
B:VAL1595
|
4.5
|
0.0
|
1.0
|
O
|
B:CYS1572
|
4.5
|
0.0
|
1.0
|
HA
|
B:VAL1595
|
4.6
|
0.0
|
1.0
|
C
|
B:CYS1572
|
4.6
|
0.0
|
1.0
|
HG22
|
B:VAL1595
|
4.6
|
0.0
|
1.0
|
HD2
|
B:PRO1570
|
4.7
|
0.0
|
1.0
|
CE
|
B:LYS1574
|
4.7
|
0.0
|
1.0
|
CA
|
B:CYS1599
|
4.7
|
0.0
|
1.0
|
CA
|
B:CYS1569
|
4.8
|
0.0
|
1.0
|
N
|
B:CYS1599
|
4.8
|
0.0
|
1.0
|
CB
|
B:LYS1574
|
4.9
|
0.0
|
1.0
|
CB
|
B:LEU1571
|
4.9
|
0.0
|
1.0
|
N
|
B:LEU1571
|
4.9
|
0.0
|
1.0
|
CA
|
B:LEU1571
|
5.0
|
0.0
|
1.0
|
|
Zinc binding site 2 out
of 2 in 7zez
Go back to
Zinc Binding Sites List in 7zez
Zinc binding site 2 out
of 2 in the Rna Binding Induces An Allosteric Switch in CYP33 to Repress MLL1 Mediated Transcription Regulation
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 2 of Rna Binding Induces An Allosteric Switch in CYP33 to Repress MLL1 Mediated Transcription Regulation within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Zn1702
b:0.0
occ:1.00
|
SG
|
B:CYS1588
|
2.3
|
0.0
|
1.0
|
SG
|
B:CYS1621
|
2.3
|
0.0
|
1.0
|
SG
|
B:CYS1591
|
2.3
|
0.0
|
1.0
|
SG
|
B:CYS1624
|
2.3
|
0.0
|
1.0
|
H
|
B:CYS1621
|
2.9
|
0.0
|
1.0
|
HB2
|
B:CYS1621
|
3.2
|
0.0
|
1.0
|
CB
|
B:CYS1588
|
3.3
|
0.0
|
1.0
|
HB2
|
B:CYS1588
|
3.3
|
0.0
|
1.0
|
H
|
B:CYS1591
|
3.4
|
0.0
|
1.0
|
CB
|
B:CYS1621
|
3.4
|
0.0
|
1.0
|
HB2
|
B:CYS1624
|
3.4
|
0.0
|
1.0
|
CB
|
B:CYS1624
|
3.4
|
0.0
|
1.0
|
HB3
|
B:CYS1591
|
3.4
|
0.0
|
1.0
|
CB
|
B:CYS1591
|
3.5
|
0.0
|
1.0
|
HB3
|
B:CYS1588
|
3.5
|
0.0
|
1.0
|
HB3
|
B:CYS1624
|
3.7
|
0.0
|
1.0
|
N
|
B:CYS1621
|
3.8
|
0.0
|
1.0
|
N
|
B:CYS1591
|
3.8
|
0.0
|
1.0
|
HB3
|
B:LYS1590
|
3.9
|
0.0
|
1.0
|
HA
|
B:THR1620
|
4.1
|
0.0
|
1.0
|
CA
|
B:CYS1591
|
4.1
|
0.0
|
1.0
|
HB3
|
B:ARG1593
|
4.2
|
0.0
|
1.0
|
H
|
B:LYS1590
|
4.2
|
0.0
|
1.0
|
CA
|
B:CYS1621
|
4.2
|
0.0
|
1.0
|
HB3
|
B:CYS1621
|
4.2
|
0.0
|
1.0
|
H
|
B:ARG1593
|
4.3
|
0.0
|
1.0
|
HB2
|
B:CYS1591
|
4.4
|
0.0
|
1.0
|
H
|
B:CYS1624
|
4.5
|
0.0
|
1.0
|
C
|
B:LYS1590
|
4.7
|
0.0
|
1.0
|
CA
|
B:CYS1588
|
4.7
|
0.0
|
1.0
|
HG2
|
B:LYS1590
|
4.7
|
0.0
|
1.0
|
CA
|
B:CYS1624
|
4.8
|
0.0
|
1.0
|
C
|
B:CYS1591
|
4.8
|
0.0
|
1.0
|
HA
|
B:CYS1621
|
4.8
|
0.0
|
1.0
|
C
|
B:THR1620
|
4.9
|
0.0
|
1.0
|
CB
|
B:LYS1590
|
4.9
|
0.0
|
1.0
|
H
|
B:ASP1592
|
4.9
|
0.0
|
1.0
|
CA
|
B:THR1620
|
5.0
|
0.0
|
1.0
|
HA
|
B:CYS1588
|
5.0
|
0.0
|
1.0
|
|
Reference:
M.Blatter,
F.Allain.
Rna Binding Induces An Allosteric Switch in CYP33 to Repress MLL1 Mediated Transcription Regulation To Be Published.
Page generated: Wed Oct 30 16:25:52 2024
|