Zinc in PDB 7zhs: 3D Reconstruction of the Cylindrical Assembly of DNAJA2 Delta G/F By Imposing D5 Symmetry
Zinc Binding Sites:
Zinc binding site 1 out
of 80 in 7zhs
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Zinc Binding Sites List in 7zhs
Zinc binding site 1 out
of 80 in the 3D Reconstruction of the Cylindrical Assembly of DNAJA2 Delta G/F By Imposing D5 Symmetry
![](/pictures/ZN/pdb/zh/7zhs-ZN-sphere_01.jpg) Mono view
![](/pictures/ZN/pdb/zh/7zhs-ZN-sphere_01_stereo.jpg) Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 1 of 3D Reconstruction of the Cylindrical Assembly of DNAJA2 Delta G/F By Imposing D5 Symmetry within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn401
b:41.0
occ:1.00
|
SG
|
A:CYS76
|
2.1
|
118.3
|
1.0
|
SG
|
A:CYS73
|
2.3
|
228.3
|
1.0
|
SG
|
A:CYS135
|
2.3
|
99.9
|
1.0
|
CB
|
A:CYS73
|
2.6
|
232.2
|
1.0
|
SG
|
A:CYS132
|
3.4
|
90.3
|
1.0
|
CB
|
A:CYS135
|
3.5
|
117.4
|
1.0
|
CB
|
A:CYS76
|
3.5
|
118.4
|
1.0
|
CB
|
A:ARG131
|
3.8
|
123.2
|
1.0
|
O
|
A:GLY80
|
3.8
|
400.0
|
1.0
|
CA
|
A:CYS73
|
4.1
|
227.6
|
1.0
|
O
|
A:ARG131
|
4.1
|
109.4
|
1.0
|
N
|
A:CYS76
|
4.2
|
126.7
|
1.0
|
CA
|
A:LYS139
|
4.3
|
161.3
|
1.0
|
C
|
A:ARG131
|
4.3
|
115.8
|
1.0
|
CA
|
A:ARG131
|
4.3
|
128.0
|
1.0
|
N
|
A:LYS139
|
4.4
|
172.7
|
1.0
|
CA
|
A:CYS76
|
4.4
|
125.4
|
1.0
|
O
|
A:CYS73
|
4.4
|
207.7
|
1.0
|
C
|
A:CYS73
|
4.5
|
206.8
|
1.0
|
C
|
A:LYS139
|
4.5
|
133.3
|
1.0
|
CA
|
A:CYS135
|
4.7
|
138.1
|
1.0
|
N
|
A:CYS135
|
4.7
|
158.2
|
1.0
|
C
|
A:GLY80
|
4.7
|
400.0
|
1.0
|
CA
|
A:GLY80
|
4.8
|
400.0
|
1.0
|
N
|
A:CYS73
|
4.8
|
257.2
|
1.0
|
O
|
A:LYS139
|
4.8
|
134.4
|
1.0
|
C
|
A:CYS76
|
5.0
|
132.3
|
1.0
|
CB
|
A:CYS132
|
5.0
|
99.8
|
1.0
|
|
Zinc binding site 2 out
of 80 in 7zhs
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Zinc Binding Sites List in 7zhs
Zinc binding site 2 out
of 80 in the 3D Reconstruction of the Cylindrical Assembly of DNAJA2 Delta G/F By Imposing D5 Symmetry
![](/pictures/ZN/pdb/zh/7zhs-ZN-sphere_02.jpg) Mono view
![](/pictures/ZN/pdb/zh/7zhs-ZN-sphere_02_stereo.jpg) Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 2 of 3D Reconstruction of the Cylindrical Assembly of DNAJA2 Delta G/F By Imposing D5 Symmetry within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn402
b:30.8
occ:1.00
|
SG
|
A:CYS119
|
2.2
|
50.6
|
1.0
|
SG
|
A:CYS92
|
2.2
|
139.8
|
1.0
|
SG
|
A:CYS116
|
2.3
|
361.1
|
1.0
|
SG
|
A:CYS89
|
2.7
|
157.4
|
1.0
|
CB
|
A:CYS116
|
2.9
|
331.8
|
1.0
|
CB
|
A:CYS92
|
3.0
|
128.2
|
1.0
|
CB
|
A:CYS89
|
3.3
|
162.5
|
1.0
|
CB
|
A:CYS119
|
3.4
|
54.0
|
1.0
|
N
|
A:CYS92
|
3.7
|
104.5
|
1.0
|
N
|
A:CYS119
|
3.9
|
73.2
|
1.0
|
CA
|
A:CYS92
|
4.0
|
119.0
|
1.0
|
CB
|
A:ALA91
|
4.0
|
88.0
|
1.0
|
CA
|
A:CYS119
|
4.3
|
58.6
|
1.0
|
CA
|
A:CYS116
|
4.4
|
322.8
|
1.0
|
CA
|
A:GLY96
|
4.4
|
400.0
|
1.0
|
N
|
A:GLY96
|
4.5
|
400.0
|
1.0
|
C
|
A:GLY96
|
4.6
|
400.0
|
1.0
|
O
|
A:GLY96
|
4.6
|
400.0
|
1.0
|
CA
|
A:GLY123
|
4.6
|
91.1
|
1.0
|
C
|
A:ALA91
|
4.6
|
92.5
|
1.0
|
CA
|
A:CYS89
|
4.7
|
164.1
|
1.0
|
O
|
A:CYS116
|
4.7
|
286.9
|
1.0
|
C
|
A:ASP118
|
4.7
|
103.4
|
1.0
|
C
|
A:CYS116
|
4.8
|
318.0
|
1.0
|
N
|
A:GLY123
|
4.8
|
71.5
|
1.0
|
C
|
A:CYS92
|
4.9
|
125.4
|
1.0
|
O
|
A:CYS89
|
4.9
|
135.1
|
1.0
|
CA
|
A:ALA91
|
4.9
|
87.8
|
1.0
|
CB
|
A:ASP118
|
4.9
|
158.8
|
1.0
|
C
|
A:CYS89
|
5.0
|
137.2
|
1.0
|
N
|
A:ASP118
|
5.0
|
183.1
|
1.0
|
|
Zinc binding site 3 out
of 80 in 7zhs
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Zinc Binding Sites List in 7zhs
Zinc binding site 3 out
of 80 in the 3D Reconstruction of the Cylindrical Assembly of DNAJA2 Delta G/F By Imposing D5 Symmetry
![](/pictures/ZN/pdb/zh/7zhs-ZN-sphere_03.jpg) Mono view
![](/pictures/ZN/pdb/zh/7zhs-ZN-sphere_03_stereo.jpg) Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 3 of 3D Reconstruction of the Cylindrical Assembly of DNAJA2 Delta G/F By Imposing D5 Symmetry within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Zn401
b:107.4
occ:1.00
|
SG
|
C:CYS76
|
2.1
|
109.5
|
1.0
|
SG
|
C:CYS73
|
2.3
|
187.5
|
1.0
|
SG
|
C:CYS135
|
2.3
|
112.6
|
1.0
|
CB
|
C:CYS73
|
2.6
|
199.1
|
1.0
|
SG
|
C:CYS132
|
3.4
|
98.2
|
1.0
|
CB
|
C:CYS135
|
3.5
|
122.3
|
1.0
|
CB
|
C:CYS76
|
3.5
|
109.3
|
1.0
|
CB
|
C:ARG131
|
3.8
|
114.3
|
1.0
|
O
|
C:GLY80
|
3.8
|
414.8
|
1.0
|
CA
|
C:CYS73
|
4.1
|
192.7
|
1.0
|
O
|
C:ARG131
|
4.1
|
103.8
|
1.0
|
N
|
C:CYS76
|
4.2
|
113.1
|
1.0
|
CA
|
C:LYS139
|
4.3
|
233.6
|
1.0
|
C
|
C:ARG131
|
4.3
|
110.9
|
1.0
|
CA
|
C:ARG131
|
4.3
|
117.8
|
1.0
|
CA
|
C:CYS76
|
4.4
|
118.0
|
1.0
|
N
|
C:LYS139
|
4.4
|
234.7
|
1.0
|
O
|
C:CYS73
|
4.4
|
156.4
|
1.0
|
C
|
C:CYS73
|
4.5
|
161.9
|
1.0
|
C
|
C:LYS139
|
4.5
|
189.7
|
1.0
|
CA
|
C:CYS135
|
4.7
|
136.9
|
1.0
|
N
|
C:CYS135
|
4.7
|
148.2
|
1.0
|
C
|
C:GLY80
|
4.7
|
417.8
|
1.0
|
CA
|
C:GLY80
|
4.8
|
418.6
|
1.0
|
N
|
C:CYS73
|
4.8
|
232.2
|
1.0
|
O
|
C:LYS139
|
4.8
|
207.5
|
1.0
|
C
|
C:CYS76
|
5.0
|
131.4
|
1.0
|
CB
|
C:CYS132
|
5.0
|
107.3
|
1.0
|
|
Zinc binding site 4 out
of 80 in 7zhs
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Zinc Binding Sites List in 7zhs
Zinc binding site 4 out
of 80 in the 3D Reconstruction of the Cylindrical Assembly of DNAJA2 Delta G/F By Imposing D5 Symmetry
![](/pictures/ZN/pdb/zh/7zhs-ZN-sphere_04.jpg) Mono view
![](/pictures/ZN/pdb/zh/7zhs-ZN-sphere_04_stereo.jpg) Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 4 of 3D Reconstruction of the Cylindrical Assembly of DNAJA2 Delta G/F By Imposing D5 Symmetry within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Zn402
b:31.4
occ:1.00
|
SG
|
C:CYS119
|
2.2
|
53.1
|
1.0
|
SG
|
C:CYS92
|
2.2
|
161.6
|
1.0
|
SG
|
C:CYS116
|
2.3
|
320.8
|
1.0
|
SG
|
C:CYS89
|
2.7
|
125.3
|
1.0
|
CB
|
C:CYS116
|
2.9
|
288.7
|
1.0
|
CB
|
C:CYS92
|
3.0
|
151.9
|
1.0
|
CB
|
C:CYS89
|
3.3
|
136.7
|
1.0
|
CB
|
C:CYS119
|
3.4
|
57.9
|
1.0
|
N
|
C:CYS92
|
3.7
|
119.5
|
1.0
|
N
|
C:CYS119
|
3.9
|
69.1
|
1.0
|
CA
|
C:CYS92
|
4.0
|
136.9
|
1.0
|
CB
|
C:ALA91
|
4.0
|
97.3
|
1.0
|
CA
|
C:CYS119
|
4.3
|
61.1
|
1.0
|
CA
|
C:CYS116
|
4.4
|
256.8
|
1.0
|
CA
|
C:GLY96
|
4.4
|
400.0
|
1.0
|
N
|
C:GLY96
|
4.5
|
409.4
|
1.0
|
C
|
C:GLY96
|
4.6
|
400.0
|
1.0
|
O
|
C:GLY96
|
4.6
|
400.0
|
1.0
|
CA
|
C:GLY123
|
4.6
|
106.0
|
1.0
|
C
|
C:ALA91
|
4.6
|
105.2
|
1.0
|
CA
|
C:CYS89
|
4.7
|
149.9
|
1.0
|
O
|
C:CYS116
|
4.7
|
201.4
|
1.0
|
C
|
C:ASP118
|
4.7
|
84.8
|
1.0
|
C
|
C:CYS116
|
4.8
|
223.4
|
1.0
|
N
|
C:GLY123
|
4.8
|
77.0
|
1.0
|
C
|
C:CYS92
|
4.9
|
142.5
|
1.0
|
O
|
C:CYS89
|
4.9
|
125.1
|
1.0
|
CA
|
C:ALA91
|
4.9
|
98.2
|
1.0
|
CB
|
C:ASP118
|
4.9
|
109.8
|
1.0
|
C
|
C:CYS89
|
5.0
|
127.7
|
1.0
|
N
|
C:ASP118
|
5.0
|
122.9
|
1.0
|
|
Zinc binding site 5 out
of 80 in 7zhs
Go back to
Zinc Binding Sites List in 7zhs
Zinc binding site 5 out
of 80 in the 3D Reconstruction of the Cylindrical Assembly of DNAJA2 Delta G/F By Imposing D5 Symmetry
![](/pictures/ZN/pdb/zh/7zhs-ZN-sphere_05.jpg) Mono view
![](/pictures/ZN/pdb/zh/7zhs-ZN-sphere_05_stereo.jpg) Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 5 of 3D Reconstruction of the Cylindrical Assembly of DNAJA2 Delta G/F By Imposing D5 Symmetry within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Zn401
b:43.3
occ:1.00
|
SG
|
B:CYS76
|
2.1
|
122.6
|
1.0
|
SG
|
B:CYS73
|
2.3
|
218.0
|
1.0
|
SG
|
B:CYS135
|
2.3
|
98.8
|
1.0
|
CB
|
B:CYS73
|
2.6
|
221.5
|
1.0
|
SG
|
B:CYS132
|
3.4
|
91.4
|
1.0
|
CB
|
B:CYS135
|
3.5
|
118.9
|
1.0
|
CB
|
B:CYS76
|
3.5
|
122.0
|
1.0
|
CB
|
B:ARG131
|
3.8
|
123.6
|
1.0
|
O
|
B:GLY80
|
3.8
|
400.0
|
1.0
|
CA
|
B:CYS73
|
4.1
|
219.7
|
1.0
|
O
|
B:ARG131
|
4.1
|
111.8
|
1.0
|
N
|
B:CYS76
|
4.2
|
131.0
|
1.0
|
CA
|
B:LYS139
|
4.3
|
164.2
|
1.0
|
C
|
B:ARG131
|
4.3
|
117.5
|
1.0
|
CA
|
B:ARG131
|
4.3
|
128.1
|
1.0
|
N
|
B:LYS139
|
4.4
|
173.1
|
1.0
|
CA
|
B:CYS76
|
4.4
|
127.5
|
1.0
|
O
|
B:CYS73
|
4.4
|
202.1
|
1.0
|
C
|
B:CYS73
|
4.5
|
202.0
|
1.0
|
C
|
B:LYS139
|
4.5
|
135.2
|
1.0
|
CA
|
B:CYS135
|
4.7
|
141.3
|
1.0
|
N
|
B:CYS135
|
4.7
|
162.8
|
1.0
|
C
|
B:GLY80
|
4.7
|
400.0
|
1.0
|
CA
|
B:GLY80
|
4.8
|
400.0
|
1.0
|
N
|
B:CYS73
|
4.8
|
249.8
|
1.0
|
O
|
B:LYS139
|
4.8
|
136.0
|
1.0
|
C
|
B:CYS76
|
5.0
|
131.3
|
1.0
|
CB
|
B:CYS132
|
5.0
|
102.7
|
1.0
|
|
Zinc binding site 6 out
of 80 in 7zhs
Go back to
Zinc Binding Sites List in 7zhs
Zinc binding site 6 out
of 80 in the 3D Reconstruction of the Cylindrical Assembly of DNAJA2 Delta G/F By Imposing D5 Symmetry
![](/pictures/ZN/pdb/zh/7zhs-ZN-sphere_06.jpg) Mono view
![](/pictures/ZN/pdb/zh/7zhs-ZN-sphere_06_stereo.jpg) Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 6 of 3D Reconstruction of the Cylindrical Assembly of DNAJA2 Delta G/F By Imposing D5 Symmetry within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Zn402
b:56.5
occ:1.00
|
SG
|
B:CYS119
|
2.2
|
58.2
|
1.0
|
SG
|
B:CYS92
|
2.2
|
145.9
|
1.0
|
SG
|
B:CYS116
|
2.3
|
386.3
|
1.0
|
SG
|
B:CYS89
|
2.7
|
161.8
|
1.0
|
CB
|
B:CYS116
|
2.9
|
338.5
|
1.0
|
CB
|
B:CYS92
|
3.0
|
138.0
|
1.0
|
CB
|
B:CYS89
|
3.3
|
165.1
|
1.0
|
CB
|
B:CYS119
|
3.4
|
62.5
|
1.0
|
N
|
B:CYS92
|
3.7
|
113.4
|
1.0
|
N
|
B:CYS119
|
3.9
|
81.5
|
1.0
|
CA
|
B:CYS92
|
4.0
|
128.6
|
1.0
|
CB
|
B:ALA91
|
4.1
|
96.3
|
1.0
|
CA
|
B:CYS119
|
4.3
|
66.4
|
1.0
|
CA
|
B:CYS116
|
4.4
|
328.9
|
1.0
|
CA
|
B:GLY96
|
4.4
|
400.0
|
1.0
|
N
|
B:GLY96
|
4.5
|
400.0
|
1.0
|
C
|
B:GLY96
|
4.6
|
400.0
|
1.0
|
O
|
B:GLY96
|
4.6
|
400.0
|
1.0
|
CA
|
B:GLY123
|
4.6
|
99.6
|
1.0
|
C
|
B:ALA91
|
4.6
|
101.2
|
1.0
|
CA
|
B:CYS89
|
4.7
|
165.7
|
1.0
|
O
|
B:CYS116
|
4.7
|
304.5
|
1.0
|
C
|
B:ASP118
|
4.7
|
111.5
|
1.0
|
C
|
B:CYS116
|
4.8
|
335.7
|
1.0
|
N
|
B:GLY123
|
4.8
|
77.3
|
1.0
|
C
|
B:CYS92
|
4.9
|
134.8
|
1.0
|
O
|
B:CYS89
|
4.9
|
137.2
|
1.0
|
CA
|
B:ALA91
|
4.9
|
96.4
|
1.0
|
CB
|
B:ASP118
|
4.9
|
159.6
|
1.0
|
C
|
B:CYS89
|
5.0
|
139.5
|
1.0
|
N
|
B:ASP118
|
5.0
|
184.0
|
1.0
|
|
Zinc binding site 7 out
of 80 in 7zhs
Go back to
Zinc Binding Sites List in 7zhs
Zinc binding site 7 out
of 80 in the 3D Reconstruction of the Cylindrical Assembly of DNAJA2 Delta G/F By Imposing D5 Symmetry
![](/pictures/ZN/pdb/zh/7zhs-ZN-sphere_07.jpg) Mono view
![](/pictures/ZN/pdb/zh/7zhs-ZN-sphere_07_stereo.jpg) Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 7 of 3D Reconstruction of the Cylindrical Assembly of DNAJA2 Delta G/F By Imposing D5 Symmetry within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Zn401
b:103.3
occ:1.00
|
SG
|
D:CYS76
|
2.1
|
115.8
|
1.0
|
SG
|
D:CYS73
|
2.3
|
180.2
|
1.0
|
SG
|
D:CYS135
|
2.3
|
113.8
|
1.0
|
CB
|
D:CYS73
|
2.6
|
191.1
|
1.0
|
SG
|
D:CYS132
|
3.4
|
100.2
|
1.0
|
CB
|
D:CYS135
|
3.5
|
125.6
|
1.0
|
CB
|
D:CYS76
|
3.5
|
114.3
|
1.0
|
CB
|
D:ARG131
|
3.8
|
116.4
|
1.0
|
O
|
D:GLY80
|
3.8
|
401.1
|
1.0
|
CA
|
D:CYS73
|
4.1
|
185.6
|
1.0
|
O
|
D:ARG131
|
4.1
|
108.0
|
1.0
|
N
|
D:CYS76
|
4.2
|
116.5
|
1.0
|
CA
|
D:LYS139
|
4.3
|
251.3
|
1.0
|
C
|
D:ARG131
|
4.3
|
113.3
|
1.0
|
CA
|
D:ARG131
|
4.3
|
117.7
|
1.0
|
CA
|
D:CYS76
|
4.4
|
121.2
|
1.0
|
N
|
D:LYS139
|
4.4
|
254.3
|
1.0
|
O
|
D:CYS73
|
4.4
|
148.9
|
1.0
|
C
|
D:CYS73
|
4.5
|
155.0
|
1.0
|
C
|
D:LYS139
|
4.5
|
196.3
|
1.0
|
CA
|
D:CYS135
|
4.7
|
143.0
|
1.0
|
N
|
D:CYS135
|
4.7
|
156.1
|
1.0
|
C
|
D:GLY80
|
4.7
|
404.1
|
1.0
|
CA
|
D:GLY80
|
4.8
|
404.7
|
1.0
|
N
|
D:CYS73
|
4.8
|
229.2
|
1.0
|
O
|
D:LYS139
|
4.8
|
213.1
|
1.0
|
C
|
D:CYS76
|
5.0
|
131.8
|
1.0
|
CB
|
D:CYS132
|
5.0
|
110.7
|
1.0
|
|
Zinc binding site 8 out
of 80 in 7zhs
Go back to
Zinc Binding Sites List in 7zhs
Zinc binding site 8 out
of 80 in the 3D Reconstruction of the Cylindrical Assembly of DNAJA2 Delta G/F By Imposing D5 Symmetry
![](/pictures/ZN/pdb/zh/7zhs-ZN-sphere_08.jpg) Mono view
![](/pictures/ZN/pdb/zh/7zhs-ZN-sphere_08_stereo.jpg) Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 8 of 3D Reconstruction of the Cylindrical Assembly of DNAJA2 Delta G/F By Imposing D5 Symmetry within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Zn402
b:44.5
occ:1.00
|
SG
|
D:CYS119
|
2.2
|
43.1
|
1.0
|
SG
|
D:CYS92
|
2.2
|
149.9
|
1.0
|
SG
|
D:CYS116
|
2.3
|
330.1
|
1.0
|
SG
|
D:CYS89
|
2.7
|
124.5
|
1.0
|
CB
|
D:CYS116
|
2.9
|
300.1
|
1.0
|
CB
|
D:CYS92
|
3.0
|
143.2
|
1.0
|
CB
|
D:CYS89
|
3.3
|
133.4
|
1.0
|
CB
|
D:CYS119
|
3.4
|
49.5
|
1.0
|
N
|
D:CYS92
|
3.7
|
117.5
|
1.0
|
N
|
D:CYS119
|
3.9
|
65.5
|
1.0
|
CA
|
D:CYS92
|
4.0
|
132.6
|
1.0
|
CB
|
D:ALA91
|
4.1
|
95.6
|
1.0
|
CA
|
D:CYS119
|
4.3
|
54.8
|
1.0
|
CA
|
D:CYS116
|
4.4
|
268.5
|
1.0
|
CA
|
D:GLY96
|
4.4
|
402.5
|
1.0
|
N
|
D:GLY96
|
4.5
|
416.5
|
1.0
|
C
|
D:GLY96
|
4.6
|
400.0
|
1.0
|
O
|
D:GLY96
|
4.6
|
400.0
|
1.0
|
CA
|
D:GLY123
|
4.6
|
101.6
|
1.0
|
C
|
D:ALA91
|
4.6
|
103.9
|
1.0
|
CA
|
D:CYS89
|
4.7
|
144.1
|
1.0
|
O
|
D:CYS116
|
4.7
|
213.4
|
1.0
|
C
|
D:ASP118
|
4.7
|
83.3
|
1.0
|
C
|
D:CYS116
|
4.8
|
234.0
|
1.0
|
N
|
D:GLY123
|
4.8
|
78.6
|
1.0
|
C
|
D:CYS92
|
4.9
|
138.7
|
1.0
|
O
|
D:CYS89
|
4.9
|
122.5
|
1.0
|
CA
|
D:ALA91
|
4.9
|
96.7
|
1.0
|
CB
|
D:ASP118
|
4.9
|
112.3
|
1.0
|
C
|
D:CYS89
|
4.9
|
124.2
|
1.0
|
N
|
D:ASP118
|
5.0
|
127.0
|
1.0
|
|
Zinc binding site 9 out
of 80 in 7zhs
Go back to
Zinc Binding Sites List in 7zhs
Zinc binding site 9 out
of 80 in the 3D Reconstruction of the Cylindrical Assembly of DNAJA2 Delta G/F By Imposing D5 Symmetry
![](/pictures/ZN/pdb/zh/7zhs-ZN-sphere_09.jpg) Mono view
![](/pictures/ZN/pdb/zh/7zhs-ZN-sphere_09_stereo.jpg) Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 9 of 3D Reconstruction of the Cylindrical Assembly of DNAJA2 Delta G/F By Imposing D5 Symmetry within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Zn401
b:146.1
occ:1.00
|
SG
|
E:CYS76
|
2.1
|
413.8
|
1.0
|
SG
|
E:CYS73
|
2.3
|
297.4
|
1.0
|
SG
|
E:CYS135
|
2.3
|
440.0
|
1.0
|
CB
|
E:CYS73
|
2.6
|
319.6
|
1.0
|
SG
|
E:CYS132
|
3.4
|
224.0
|
1.0
|
CB
|
E:CYS135
|
3.5
|
440.0
|
1.0
|
CB
|
E:CYS76
|
3.5
|
414.2
|
1.0
|
CB
|
E:ARG131
|
3.8
|
364.7
|
1.0
|
O
|
E:GLY80
|
3.8
|
440.0
|
1.0
|
CA
|
E:CYS73
|
4.1
|
335.5
|
1.0
|
O
|
E:ARG131
|
4.1
|
276.7
|
1.0
|
N
|
E:CYS76
|
4.2
|
418.0
|
1.0
|
CA
|
E:LYS139
|
4.3
|
440.0
|
1.0
|
C
|
E:ARG131
|
4.3
|
306.8
|
1.0
|
CA
|
E:ARG131
|
4.3
|
350.9
|
1.0
|
N
|
E:LYS139
|
4.4
|
440.0
|
1.0
|
O
|
E:CYS73
|
4.4
|
353.4
|
1.0
|
CA
|
E:CYS76
|
4.4
|
428.2
|
1.0
|
C
|
E:CYS73
|
4.5
|
343.8
|
1.0
|
C
|
E:LYS139
|
4.5
|
440.0
|
1.0
|
CA
|
E:CYS135
|
4.7
|
440.0
|
1.0
|
N
|
E:CYS135
|
4.7
|
440.0
|
1.0
|
C
|
E:GLY80
|
4.7
|
440.0
|
1.0
|
CA
|
E:GLY80
|
4.8
|
440.0
|
1.0
|
N
|
E:CYS73
|
4.8
|
346.1
|
1.0
|
O
|
E:LYS139
|
4.8
|
440.0
|
1.0
|
C
|
E:CYS76
|
5.0
|
438.2
|
1.0
|
CB
|
E:CYS132
|
5.0
|
246.3
|
1.0
|
|
Zinc binding site 10 out
of 80 in 7zhs
Go back to
Zinc Binding Sites List in 7zhs
Zinc binding site 10 out
of 80 in the 3D Reconstruction of the Cylindrical Assembly of DNAJA2 Delta G/F By Imposing D5 Symmetry
![](/pictures/ZN/pdb/zh/7zhs-ZN-sphere_10.jpg) Mono view
![](/pictures/ZN/pdb/zh/7zhs-ZN-sphere_10_stereo.jpg) Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 10 of 3D Reconstruction of the Cylindrical Assembly of DNAJA2 Delta G/F By Imposing D5 Symmetry within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Zn402
b:291.1
occ:1.00
|
SG
|
E:CYS92
|
2.2
|
305.2
|
1.0
|
SG
|
E:CYS119
|
2.2
|
158.2
|
1.0
|
SG
|
E:CYS116
|
2.3
|
440.0
|
1.0
|
SG
|
E:CYS89
|
2.7
|
271.5
|
1.0
|
CB
|
E:CYS116
|
2.9
|
440.0
|
1.0
|
CB
|
E:CYS92
|
3.0
|
301.9
|
1.0
|
CB
|
E:CYS89
|
3.3
|
287.0
|
1.0
|
CB
|
E:CYS119
|
3.4
|
171.1
|
1.0
|
N
|
E:CYS92
|
3.7
|
255.8
|
1.0
|
N
|
E:CYS119
|
3.9
|
214.4
|
1.0
|
CA
|
E:CYS92
|
4.0
|
277.5
|
1.0
|
CB
|
E:ALA91
|
4.0
|
222.1
|
1.0
|
CA
|
E:CYS119
|
4.3
|
186.4
|
1.0
|
CA
|
E:CYS116
|
4.4
|
440.0
|
1.0
|
CA
|
E:GLY96
|
4.4
|
420.7
|
1.0
|
N
|
E:GLY96
|
4.5
|
423.8
|
1.0
|
C
|
E:GLY96
|
4.6
|
418.8
|
1.0
|
O
|
E:GLY96
|
4.6
|
420.6
|
1.0
|
CA
|
E:GLY123
|
4.6
|
214.0
|
1.0
|
C
|
E:ALA91
|
4.6
|
232.9
|
1.0
|
CA
|
E:CYS89
|
4.7
|
308.3
|
1.0
|
O
|
E:CYS116
|
4.7
|
433.3
|
1.0
|
C
|
E:ASP118
|
4.7
|
261.9
|
1.0
|
C
|
E:CYS116
|
4.8
|
434.9
|
1.0
|
N
|
E:GLY123
|
4.8
|
179.3
|
1.0
|
C
|
E:CYS92
|
4.9
|
275.5
|
1.0
|
O
|
E:CYS89
|
4.9
|
269.9
|
1.0
|
CA
|
E:ALA91
|
4.9
|
221.0
|
1.0
|
CB
|
E:ASP118
|
4.9
|
341.0
|
1.0
|
C
|
E:CYS89
|
4.9
|
273.3
|
1.0
|
N
|
E:ASP118
|
5.0
|
351.1
|
1.0
|
|
Reference:
L.Velasco-Carneros,
J.Cuellar,
L.Dublang,
C.Santiago,
J.D.Marechal,
J.Martin-Benito,
J.A.Fernandez-Higuero,
N.Orozco,
F.Moro,
J.M.Valpuesta,
A.Muga.
The Class A HSP40 DNAJA2 Self-Associates Into Ordered, Highly Dynamic Tubular Oligomers That Productively Interact with Unfolded Substrates and HSC70 To Be Published.
Page generated: Thu Dec 28 12:45:18 2023
|