Zinc in PDB 7zey: Rna Binding Induces An Allosteric Switch in CYP33 to Repress MLL1 Mediated Transcription
Enzymatic activity of Rna Binding Induces An Allosteric Switch in CYP33 to Repress MLL1 Mediated Transcription
All present enzymatic activity of Rna Binding Induces An Allosteric Switch in CYP33 to Repress MLL1 Mediated Transcription:
5.2.1.8;
Zinc Binding Sites:
The binding sites of Zinc atom in the Rna Binding Induces An Allosteric Switch in CYP33 to Repress MLL1 Mediated Transcription
(pdb code 7zey). This binding sites where shown within
5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the
Rna Binding Induces An Allosteric Switch in CYP33 to Repress MLL1 Mediated Transcription, PDB code: 7zey:
Jump to Zinc binding site number:
1;
2;
Zinc binding site 1 out
of 2 in 7zey
Go back to
Zinc Binding Sites List in 7zey
Zinc binding site 1 out
of 2 in the Rna Binding Induces An Allosteric Switch in CYP33 to Repress MLL1 Mediated Transcription
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 1 of Rna Binding Induces An Allosteric Switch in CYP33 to Repress MLL1 Mediated Transcription within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Zn1701
b:0.0
occ:1.00
|
ND1
|
B:HIS1596
|
2.0
|
0.0
|
1.0
|
SG
|
B:CYS1569
|
2.3
|
0.0
|
1.0
|
SG
|
B:CYS1599
|
2.3
|
0.0
|
1.0
|
SG
|
B:CYS1572
|
2.3
|
0.0
|
1.0
|
HB2
|
B:HIS1596
|
2.9
|
0.0
|
1.0
|
CE1
|
B:HIS1596
|
3.0
|
0.0
|
1.0
|
CG
|
B:HIS1596
|
3.1
|
0.0
|
1.0
|
HB3
|
B:CYS1569
|
3.2
|
0.0
|
1.0
|
HE1
|
B:HIS1596
|
3.3
|
0.0
|
1.0
|
HB3
|
B:CYS1572
|
3.3
|
0.0
|
1.0
|
CB
|
B:CYS1569
|
3.3
|
0.0
|
1.0
|
CB
|
B:CYS1599
|
3.4
|
0.0
|
1.0
|
CB
|
B:CYS1572
|
3.5
|
0.0
|
1.0
|
HB2
|
B:CYS1599
|
3.5
|
0.0
|
1.0
|
CB
|
B:HIS1596
|
3.5
|
0.0
|
1.0
|
HB3
|
B:CYS1599
|
3.6
|
0.0
|
1.0
|
HB2
|
B:CYS1569
|
3.6
|
0.0
|
1.0
|
H
|
B:HIS1596
|
3.7
|
0.0
|
1.0
|
HB2
|
B:LYS1574
|
3.7
|
0.0
|
1.0
|
H
|
B:CYS1572
|
4.0
|
0.0
|
1.0
|
NE2
|
B:HIS1596
|
4.2
|
0.0
|
1.0
|
HB2
|
B:LEU1571
|
4.2
|
0.0
|
1.0
|
N
|
B:CYS1572
|
4.2
|
0.0
|
1.0
|
CD2
|
B:HIS1596
|
4.2
|
0.0
|
1.0
|
HB2
|
B:CYS1572
|
4.3
|
0.0
|
1.0
|
HB3
|
B:HIS1596
|
4.3
|
0.0
|
1.0
|
HD2
|
B:LYS1574
|
4.3
|
0.0
|
1.0
|
CA
|
B:CYS1572
|
4.4
|
0.0
|
1.0
|
H
|
B:CYS1599
|
4.5
|
0.0
|
1.0
|
N
|
B:HIS1596
|
4.5
|
0.0
|
1.0
|
H
|
B:LYS1574
|
4.6
|
0.0
|
1.0
|
CA
|
B:HIS1596
|
4.6
|
0.0
|
1.0
|
H
|
B:LEU1571
|
4.7
|
0.0
|
1.0
|
CA
|
B:CYS1569
|
4.7
|
0.0
|
1.0
|
O
|
B:HIS1596
|
4.8
|
0.0
|
1.0
|
CA
|
B:CYS1599
|
4.8
|
0.0
|
1.0
|
O
|
B:CYS1569
|
4.8
|
0.0
|
1.0
|
CB
|
B:LYS1574
|
4.8
|
0.0
|
1.0
|
C
|
B:LEU1571
|
4.8
|
0.0
|
1.0
|
C
|
B:CYS1572
|
4.9
|
0.0
|
1.0
|
O
|
B:CYS1572
|
5.0
|
0.0
|
1.0
|
C
|
B:CYS1569
|
5.0
|
0.0
|
1.0
|
N
|
B:CYS1599
|
5.0
|
0.0
|
1.0
|
|
Zinc binding site 2 out
of 2 in 7zey
Go back to
Zinc Binding Sites List in 7zey
Zinc binding site 2 out
of 2 in the Rna Binding Induces An Allosteric Switch in CYP33 to Repress MLL1 Mediated Transcription
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 2 of Rna Binding Induces An Allosteric Switch in CYP33 to Repress MLL1 Mediated Transcription within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Zn1702
b:0.0
occ:1.00
|
SG
|
B:CYS1588
|
2.3
|
0.0
|
1.0
|
SG
|
B:CYS1624
|
2.3
|
0.0
|
1.0
|
SG
|
B:CYS1621
|
2.3
|
0.0
|
1.0
|
SG
|
B:CYS1591
|
2.3
|
0.0
|
1.0
|
HB2
|
B:CYS1624
|
3.2
|
0.0
|
1.0
|
H
|
B:CYS1621
|
3.2
|
0.0
|
1.0
|
CB
|
B:CYS1588
|
3.3
|
0.0
|
1.0
|
HB3
|
B:CYS1621
|
3.3
|
0.0
|
1.0
|
HB3
|
B:CYS1588
|
3.3
|
0.0
|
1.0
|
HB3
|
B:CYS1591
|
3.4
|
0.0
|
1.0
|
CB
|
B:CYS1624
|
3.4
|
0.0
|
1.0
|
HB2
|
B:CYS1588
|
3.4
|
0.0
|
1.0
|
CB
|
B:CYS1621
|
3.4
|
0.0
|
1.0
|
CB
|
B:CYS1591
|
3.5
|
0.0
|
1.0
|
H
|
B:CYS1624
|
3.7
|
0.0
|
1.0
|
H
|
B:CYS1591
|
3.9
|
0.0
|
1.0
|
N
|
B:CYS1621
|
4.0
|
0.0
|
1.0
|
HB
|
B:THR1620
|
4.0
|
0.0
|
1.0
|
HG3
|
B:LYS1590
|
4.0
|
0.0
|
1.0
|
HB3
|
B:CYS1624
|
4.1
|
0.0
|
1.0
|
N
|
B:CYS1591
|
4.1
|
0.0
|
1.0
|
N
|
B:CYS1624
|
4.2
|
0.0
|
1.0
|
HH21
|
B:ARG1593
|
4.2
|
0.0
|
1.0
|
CA
|
B:CYS1621
|
4.2
|
0.0
|
1.0
|
H
|
B:LYS1590
|
4.2
|
0.0
|
1.0
|
CA
|
B:CYS1591
|
4.3
|
0.0
|
1.0
|
HB2
|
B:CYS1621
|
4.3
|
0.0
|
1.0
|
HB2
|
B:CYS1591
|
4.3
|
0.0
|
1.0
|
HB3
|
B:ARG1593
|
4.3
|
0.0
|
1.0
|
CA
|
B:CYS1624
|
4.4
|
0.0
|
1.0
|
HE
|
B:ARG1593
|
4.4
|
0.0
|
1.0
|
H
|
B:ASN1623
|
4.4
|
0.0
|
1.0
|
HG2
|
B:LYS1590
|
4.6
|
0.0
|
1.0
|
HB2
|
B:ASN1623
|
4.6
|
0.0
|
1.0
|
CA
|
B:CYS1588
|
4.7
|
0.0
|
1.0
|
O
|
B:CYS1591
|
4.7
|
0.0
|
1.0
|
C
|
B:CYS1591
|
4.7
|
0.0
|
1.0
|
C
|
B:CYS1621
|
4.8
|
0.0
|
1.0
|
O
|
B:CYS1621
|
4.8
|
0.0
|
1.0
|
H
|
B:GLY1589
|
4.8
|
0.0
|
1.0
|
HA
|
B:CYS1624
|
4.8
|
0.0
|
1.0
|
H
|
B:ARG1593
|
4.8
|
0.0
|
1.0
|
CG
|
B:LYS1590
|
4.8
|
0.0
|
1.0
|
C
|
B:LYS1590
|
4.9
|
0.0
|
1.0
|
HA
|
B:CYS1588
|
5.0
|
0.0
|
1.0
|
CB
|
B:THR1620
|
5.0
|
0.0
|
1.0
|
|
Reference:
M.Blatter,
F.Allain,
C.Meylan.
Rna Binding Induces An Allosteric Switch in CYP33 to Repress MLL1 Mediated Transcription To Be Published.
Page generated: Wed Oct 30 16:25:49 2024
|