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Zinc in PDB, part 491 (files: 19601-19640), PDB 8dgt-8e0q

Experimental structures of coordination spheres of Zinc (Zn) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Zinc atoms. PDB files: 19601-19640 (PDB 8dgt-8e0q).
  1. 8dgt (Zn: 2) - Cryo-Em Structure of A Ras/Raf Complex (State 2)
    Other atoms: I (1); F (1); Mg (2);
  2. 8dh6 (Zn: 1) - Cryo-Em Structure of Saccharomyces Cerevisiae Cytochrome C Oxidase (Complex IV) Extracted in Lipid Nanodiscs
    Other atoms: Fe (2); Cu (2); Ca (1); Mg (1);
  3. 8di4 (Zn: 2) - Discovery of Mk-8189, A Highly Potent and Selective PDE10A Inhibitor For the Treatment of Schizophrenia
    Other atoms: Mg (2);
  4. 8dj9 (Zn: 1) - Carbonic Anhydrase II in Complex with Ibuprofen
  5. 8djh (Zn: 4) - Ternary Complex of SUMO1 with A Phosphomimetic Sim of Pml and Zinc
  6. 8dji (Zn: 3) - Ternary Complex of SUMO1 with the Sim of Pml and Zinc
  7. 8dpc (Zn: 4) - Crystal Structure of Carbonic Anhydrase From Neisseria Gonorrhoeae
  8. 8dpo (Zn: 4) - Crystal Structure of Neisseria Gonorrhoeae Carbonic Anhydrase with Acetazolamide
  9. 8dpr (Zn: 1) - Crystal Structure of Sars-Cov-2 Main Protease in Complex with Inhibitor Tkb-248
    Other atoms: F (4);
  10. 8dq9 (Zn: 2) - Crystal Structure of Gdp Bound 3-Dehydroquinate Dehydratase I From Klebsiella Oxytoca
    Other atoms: Cl (2);
  11. 8dqb (Zn: 2) - Crystal Structure of 3-Dehydroquinate Dehydratase I From Klebsiella Oxytoca (I23 Form)
  12. 8dqc (Zn: 2) - Crystal Structure of 3-Dehydroquinate Dehydratase I From Klebsiella Oxytoca (I222 Form)
  13. 8dqf (Zn: 4) - Crystal Structure of Neisseria Gonorrhoeae Carbonic Anhydrase with N- (5-Sulfamoyl-1,3,4-Thiadiazol-2-Yl)Cyclohexanecarboxamide
  14. 8dqn (Zn: 16) - Crystal Structure of Isoaspartyl Dipeptidase From Leucothrix Mucor DSM2157
  15. 8dr2 (Zn: 4) - Crystal Structure of Neisseria Gonorrhoeae Carbonic Anhydrase with 2- Cyclohexyl-N-(5-Sulfamoyl-1,3,4-Thiadiazol-2-Yl)Acetamide
  16. 8drb (Zn: 4) - Crystal Structure of Neisseria Gonorrhoeae Carbonic Anhydrase with 3- Phenyl-N-(5-Sulfamoyl-1,3,4-Thiadiazol-2-Yl)Propanamide
  17. 8drf (Zn: 3) - Zn(II)-Bound B2 Dimer (H60/H100/H104)
    Other atoms: Fe (1);
  18. 8drl (Zn: 3) - Zn(II)-Bound B2 Dimer (H60/H100/H104) Formed in Cu(II)//Zn(II) (M1 // M2) Condition
    Other atoms: Fe (1);
  19. 8drm (Zn: 3) - Zn(II)-Bound B2 Dimer (H60/H100/H104) Formed in Zn(II)//Cu(II) (M1 // M2) Condition
    Other atoms: Fe (1);
  20. 8drp (Zn: 4) - Focus/Local Refined Map in C4 of Signal Subtracted RYR1 Particles
  21. 8dsf (Zn: 4) - Structure of CIAP1 with Bccov
  22. 8dso (Zn: 1) - Structure of CIAP1, Btk and Bccov
  23. 8dtn (Zn: 4) - The Complex of Nanobody 6101 with BCL11A ZF6
    Other atoms: Mg (4);
  24. 8dtu (Zn: 1) - The Complex of Nanobody 5344N74D with BCL11A ZF6.
  25. 8dvr (Zn: 1) - Cryo-Em Structure of Rig-I Bound to the End of P3SLR30 (+Amppnp)
  26. 8dvs (Zn: 1) - Cryo-Em Structure of Rig-I Bound to the End of OHSLR30 (+Atp)
    Other atoms: Mg (1);
  27. 8dvu (Zn: 1) - Cryo-Em Structure of Rig-I Bound to the Internal Sites of OHSLR30 (+Atp)
    Other atoms: Mg (1);
  28. 8dw6 (Zn: 1) - T4 Bacteriophage Primosome with Single-Strand Dna, State 3
    Other atoms: Mg (5);
  29. 8dwj (Zn: 1) - Primase of Mutant Bacteriophage T4 Primosome with Single Strand Dna/Rna Primer Hybrid in Primer Exiting State
  30. 8dwl (Zn: 4) - Inhibitor-3:PP1 Coexpressed Complex
  31. 8dy7 (Zn: 3) - Streptomyces Venezuelae Rnap Transcription Open Promoter Complex with Whia and Whib Transcription Factors
    Other atoms: Mg (1); Fe (4);
  32. 8dy9 (Zn: 3) - Streptomyces Venezuelae Rnap Unconstrained Open Promoter Complex with Whia and Whib Transcription Factors
    Other atoms: Mg (1); Fe (4);
  33. 8dyq (Zn: 4) - Crystal Structure of Neisseria Gonorrhoeae Carbonic Anhydrase with Acetazolamide
  34. 8dze (Zn: 6) - Cryo-Em Structure of Bundle-Forming Pilus Extension Atpase From E. Coli in the Presence of Amp-Pnp (Class-1)
  35. 8dzf (Zn: 6) - Cryo-Em Structure of Bundle-Forming Pilus Extension Atpase From E.Coli in the Presence of Amp-Pnp (Class-2)
  36. 8dzg (Zn: 6) - Cryo-Em Structure of Bundle-Forming Pilus Extension Atpase From E.Coli in the Presence of Adp
    Other atoms: Mg (6);
  37. 8dzj (Zn: 1) - Cryo-Em Structure of Acidibacillus Sulfuroxidans CAS12F in Complex with Sgrna and Target Dna
  38. 8dzk (Zn: 5) - DBR1 in Complex with 5-Mer Cleavage Product
    Other atoms: Fe (5);
  39. 8e0f (Zn: 2) - Human Adenosine Deaminase Acting on Dsrna (ADAR2-Rd) Bound to Dsrna Containing A G-G Pair Adjacent to the Target Site
  40. 8e0q (Zn: 6) - Structure of the Human UBR5 Hect-Type E3 Ubiquitin Ligase in A C2 Symmetric Dimeric Form
Page generated: Fri Jul 28 12:58:18 2023

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