Atomistry » Zinc » PDB 7z16-7zdm » 7zbh
Atomistry »
  Zinc »
    PDB 7z16-7zdm »
      7zbh »

Zinc in PDB 7zbh: Atp-Dependent Zinc Metalloprotease Ftsh (BB0789) From Borrelia Burgdorferi

Protein crystallography data

The structure of Atp-Dependent Zinc Metalloprotease Ftsh (BB0789) From Borrelia Burgdorferi, PDB code: 7zbh was solved by K.Brangulis, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 96.75 / 3.30
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 153.81, 192.8, 114.13, 90, 124.31, 90
R / Rfree (%) 27.9 / 33.2

Zinc Binding Sites:

The binding sites of Zinc atom in the Atp-Dependent Zinc Metalloprotease Ftsh (BB0789) From Borrelia Burgdorferi (pdb code 7zbh). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 6 binding sites of Zinc where determined in the Atp-Dependent Zinc Metalloprotease Ftsh (BB0789) From Borrelia Burgdorferi, PDB code: 7zbh:
Jump to Zinc binding site number: 1; 2; 3; 4; 5; 6;

Zinc binding site 1 out of 6 in 7zbh

Go back to Zinc Binding Sites List in 7zbh
Zinc binding site 1 out of 6 in the Atp-Dependent Zinc Metalloprotease Ftsh (BB0789) From Borrelia Burgdorferi


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Atp-Dependent Zinc Metalloprotease Ftsh (BB0789) From Borrelia Burgdorferi within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn702

b:66.9
occ:0.00
NE2 A:HIS434 1.2 71.9 1.0
OD2 A:ASP510 1.6 76.0 1.0
NE2 A:HIS438 1.7 107.0 1.0
CE1 A:HIS434 1.9 76.1 1.0
CG A:ASP510 2.2 79.7 1.0
CD2 A:HIS434 2.3 106.0 1.0
OD1 A:ASP510 2.4 110.3 1.0
CE1 A:HIS438 2.6 110.0 1.0
CD2 A:HIS438 2.8 120.0 1.0
ND1 A:HIS434 3.0 88.6 1.0
CG A:HIS434 3.2 105.8 1.0
CB A:ASP510 3.5 95.7 1.0
ND1 A:HIS438 3.7 132.7 1.0
CG A:HIS438 3.9 134.8 1.0
O A:GLY506 4.3 93.5 1.0
CB A:HIS434 4.6 104.8 1.0
CA A:ASP510 4.8 99.1 1.0
O A:CYS489 4.8 65.0 1.0
OE2 A:GLU435 4.8 86.9 1.0
O A:HIS434 4.8 151.2 1.0
CA A:GLY492 5.0 80.7 1.0

Zinc binding site 2 out of 6 in 7zbh

Go back to Zinc Binding Sites List in 7zbh
Zinc binding site 2 out of 6 in the Atp-Dependent Zinc Metalloprotease Ftsh (BB0789) From Borrelia Burgdorferi


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Atp-Dependent Zinc Metalloprotease Ftsh (BB0789) From Borrelia Burgdorferi within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn702

b:77.7
occ:0.00
NE2 B:HIS438 1.7 97.4 1.0
OD2 B:ASP510 1.7 116.3 1.0
NE2 B:HIS434 1.9 96.3 1.0
CD2 B:HIS438 2.5 115.9 1.0
CD2 B:HIS434 2.7 106.4 1.0
CG B:ASP510 2.7 123.3 1.0
CE1 B:HIS438 2.8 104.3 1.0
CE1 B:HIS434 3.0 115.4 1.0
OD1 B:ASP510 3.0 124.7 1.0
CG B:HIS438 3.6 138.8 1.0
ND1 B:HIS438 3.7 125.1 1.0
CG B:HIS434 3.9 122.1 1.0
ND1 B:HIS434 4.0 115.7 1.0
CB B:ASP510 4.1 121.9 1.0
OE2 B:GLU435 4.5 97.0 1.0
OE1 B:GLU435 4.5 113.6 1.0
CD B:GLU435 4.9 110.9 1.0
CB B:HIS438 5.0 128.5 1.0
O B:GLY506 5.0 91.3 1.0

Zinc binding site 3 out of 6 in 7zbh

Go back to Zinc Binding Sites List in 7zbh
Zinc binding site 3 out of 6 in the Atp-Dependent Zinc Metalloprotease Ftsh (BB0789) From Borrelia Burgdorferi


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 3 of Atp-Dependent Zinc Metalloprotease Ftsh (BB0789) From Borrelia Burgdorferi within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Zn702

b:79.3
occ:0.00
NE2 D:HIS438 1.9 95.9 1.0
NE2 D:HIS434 2.0 73.0 1.0
OD2 D:ASP510 2.1 91.1 1.0
CD2 D:HIS438 2.5 125.0 1.0
CD2 D:HIS434 2.6 85.5 1.0
CE1 D:HIS438 3.0 135.1 1.0
CG D:ASP510 3.1 102.6 1.0
CE1 D:HIS434 3.2 91.0 1.0
OD1 D:ASP510 3.3 125.1 1.0
CG D:HIS438 3.6 138.8 1.0
ND1 D:HIS438 3.8 144.9 1.0
CG D:HIS434 3.9 106.4 1.0
OE2 D:GLU435 4.1 128.1 1.0
ND1 D:HIS434 4.1 116.7 1.0
OE1 D:GLU435 4.2 154.0 1.0
CB D:ASP510 4.5 119.5 1.0
CD D:GLU435 4.5 157.9 1.0
CB D:HIS438 4.9 129.1 1.0

Zinc binding site 4 out of 6 in 7zbh

Go back to Zinc Binding Sites List in 7zbh
Zinc binding site 4 out of 6 in the Atp-Dependent Zinc Metalloprotease Ftsh (BB0789) From Borrelia Burgdorferi


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 4 of Atp-Dependent Zinc Metalloprotease Ftsh (BB0789) From Borrelia Burgdorferi within 5.0Å range:
probe atom residue distance (Å) B Occ
F:Zn702

b:79.2
occ:0.00
NE2 F:HIS434 2.2 79.2 1.0
OD2 F:ASP510 2.6 82.9 1.0
NE2 F:HIS438 2.8 99.3 1.0
CD2 F:HIS434 2.8 101.4 1.0
OD1 F:ASP510 3.2 121.0 1.0
CG F:ASP510 3.3 91.1 1.0
CD2 F:HIS438 3.3 109.6 1.0
CE1 F:HIS434 3.4 79.0 1.0
CE1 F:HIS438 3.9 93.2 1.0
OE2 F:GLU435 4.0 77.2 1.0
CG F:HIS434 4.1 105.7 1.0
ND1 F:HIS434 4.3 90.2 1.0
OE1 F:GLU435 4.3 110.6 1.0
CG F:HIS438 4.5 113.0 1.0
CD F:GLU435 4.6 100.7 1.0
ND1 F:HIS438 4.7 135.7 1.0
O F:GLY506 4.8 123.8 1.0
CB F:ASP510 4.8 110.5 1.0
OD1 F:ASN509 4.9 167.0 1.0

Zinc binding site 5 out of 6 in 7zbh

Go back to Zinc Binding Sites List in 7zbh
Zinc binding site 5 out of 6 in the Atp-Dependent Zinc Metalloprotease Ftsh (BB0789) From Borrelia Burgdorferi


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 5 of Atp-Dependent Zinc Metalloprotease Ftsh (BB0789) From Borrelia Burgdorferi within 5.0Å range:
probe atom residue distance (Å) B Occ
I:Zn702

b:80.8
occ:0.00
NE2 I:HIS434 1.9 84.3 1.0
OD2 I:ASP510 2.2 87.9 1.0
NE2 I:HIS438 2.7 91.2 1.0
OD1 I:ASP510 2.7 125.9 1.0
CD2 I:HIS434 2.7 92.4 1.0
CG I:ASP510 2.8 106.9 1.0
CE1 I:HIS434 3.0 99.7 1.0
CD2 I:HIS438 3.4 122.3 1.0
CE1 I:HIS438 3.7 109.1 1.0
CG I:HIS434 3.9 116.5 1.0
ND1 I:HIS434 4.0 108.0 1.0
OE2 I:GLU435 4.2 127.0 1.0
CB I:ASP510 4.3 129.5 1.0
O I:GLY506 4.4 119.1 1.0
CG I:HIS438 4.6 124.5 1.0
ND1 I:HIS438 4.7 112.0 1.0
OD1 I:ASN509 4.7 184.7 1.0
OE1 I:GLU435 4.7 167.3 1.0
CD I:GLU435 4.9 166.6 1.0

Zinc binding site 6 out of 6 in 7zbh

Go back to Zinc Binding Sites List in 7zbh
Zinc binding site 6 out of 6 in the Atp-Dependent Zinc Metalloprotease Ftsh (BB0789) From Borrelia Burgdorferi


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 6 of Atp-Dependent Zinc Metalloprotease Ftsh (BB0789) From Borrelia Burgdorferi within 5.0Å range:
probe atom residue distance (Å) B Occ
K:Zn702

b:82.7
occ:0.00
NE2 K:HIS434 2.0 71.1 1.0
OD2 K:ASP510 2.6 92.0 1.0
CD2 K:HIS434 2.8 78.3 1.0
OD1 K:ASP510 2.9 120.2 1.0
NE2 K:HIS438 3.0 133.2 1.0
CG K:ASP510 3.1 103.9 1.0
CE1 K:HIS434 3.2 63.2 1.0
CD2 K:HIS438 3.7 146.9 1.0
CG K:HIS434 4.0 89.7 1.0
OE2 K:GLU435 4.0 121.1 1.0
CE1 K:HIS438 4.1 150.3 1.0
ND1 K:HIS434 4.1 74.0 1.0
O K:GLY506 4.3 82.4 1.0
CB K:ASP510 4.6 98.6 1.0
OE1 K:GLU435 4.6 116.8 1.0
CD K:GLU435 4.7 101.7 1.0
CG K:HIS438 4.9 161.6 1.0

Reference:

K.Brangulis, K.Brangulis. N/A N/A.
Page generated: Wed Oct 30 16:21:10 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy