Zinc in PDB 7zbz: CAND1 Delhairpin-Scf-SKP2 CAND1 Partly Engaged Scf Partly Rocked

The binding sites of Zinc atom in the CAND1 Delhairpin-Scf-SKP2 CAND1 Partly Engaged Scf Partly Rocked (pdb code 7zbz). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 3 binding sites of Zinc where determined in the CAND1 Delhairpin-Scf-SKP2 CAND1 Partly Engaged Scf Partly Rocked, PDB code: 7zbz:
Jump to Zinc binding site number: 1; 2; 3;

Zinc binding site 1 out of 3 in the CAND1 Delhairpin-Scf-SKP2 CAND1 Partly Engaged Scf Partly Rocked


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of CAND1 Delhairpin-Scf-SKP2 CAND1 Partly Engaged Scf Partly Rocked within 5.0Å range: probe atom residue distance (Å) B Occ R:Zn201 b:84.9 occ:1.00 ND1 R:HIS80 2.0 69.9 1.0 SG R:CYS45 2.3 81.8 1.0 SG R:CYS42 2.3 79.0 1.0 SG R:CYS83 2.3 68.2 1.0 CE1 R:HIS80 2.8 69.9 1.0 CB R:CYS42 2.8 79.0 1.0 CG R:HIS80 3.2 69.9 1.0 CB R:CYS83 3.6 68.2 1.0 CB R:HIS80 3.6 69.9 1.0 CB R:CYS45 3.7 81.8 1.0 N R:CYS45 4.0 81.8 1.0 NE2 R:HIS80 4.0 69.9 1.0 O R:CYS45 4.1 81.8 1.0 CD2 R:HIS80 4.2 69.9 1.0 CA R:CYS45 4.3 81.8 1.0 N R:HIS80 4.3 69.9 1.0 CA R:CYS42 4.3 79.0 1.0 CA R:HIS80 4.6 69.9 1.0 C R:CYS45 4.7 81.8 1.0 SG R:CYS53 4.9 89.6 1.0 C R:CYS42 4.9 79.0 1.0 CA R:CYS83 5.0 68.2 1.0 CB R:ILE44 5.0 75.2 1.0

Zinc binding site 2 out of 3 in the CAND1 Delhairpin-Scf-SKP2 CAND1 Partly Engaged Scf Partly Rocked


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of CAND1 Delhairpin-Scf-SKP2 CAND1 Partly Engaged Scf Partly Rocked within 5.0Å range: probe atom residue distance (Å) B Occ R:Zn202 b:61.8 occ:1.00 OD2 R:ASP97 2.0 61.1 1.0 ND1 R:HIS77 2.0 51.9 1.0 SG R:CYS75 2.3 50.8 1.0 SG R:CYS94 2.3 59.1 1.0 CG R:ASP97 2.9 61.1 1.0 CE1 R:HIS77 2.9 51.9 1.0 CG R:HIS77 3.1 51.9 1.0 OD1 R:ASP97 3.3 61.1 1.0 CB R:CYS94 3.3 59.1 1.0 CB R:CYS75 3.3 50.8 1.0 CB R:HIS77 3.5 51.9 1.0 NE2 R:HIS77 4.1 51.9 1.0 CB R:ASP97 4.1 61.1 1.0 CD2 R:HIS77 4.2 51.9 1.0 N R:ASP97 4.3 61.1 1.0 O R:CYS75 4.6 50.8 1.0 CA R:CYS75 4.6 50.8 1.0 CB R:LEU96 4.7 58.0 1.0 C R:LEU96 4.7 58.0 1.0 CA R:ASP97 4.8 61.1 1.0 CA R:CYS94 4.8 59.1 1.0 C R:CYS75 4.8 50.8 1.0 CZ3 R:TRP101 4.8 53.9 1.0 CA R:HIS77 4.8 51.9 1.0 N R:LEU96 4.8 58.0 1.0 N R:HIS77 4.9 51.9 1.0 CA R:LEU96 5.0 58.0 1.0

Zinc binding site 3 out of 3 in the CAND1 Delhairpin-Scf-SKP2 CAND1 Partly Engaged Scf Partly Rocked


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 3 of CAND1 Delhairpin-Scf-SKP2 CAND1 Partly Engaged Scf Partly Rocked within 5.0Å range: probe atom residue distance (Å) B Occ R:Zn203 b:87.8 occ:1.00 ND1 R:HIS82 2.0 72.1 1.0 SG R:CYS68 2.3 82.0 1.0 SG R:CYS56 2.3 92.4 1.0 SG R:CYS53 2.3 89.6 1.0 CB R:CYS53 2.9 89.6 1.0 CE1 R:HIS82 2.9 72.1 1.0 CG R:HIS82 3.1 72.1 1.0 CB R:HIS82 3.5 72.1 1.0 CB R:CYS68 3.6 82.0 1.0 N R:CYS53 3.6 89.6 1.0 CB R:CYS56 3.8 92.4 1.0 CA R:CYS53 3.9 89.6 1.0 NE2 R:HIS82 4.1 72.1 1.0 CD2 R:HIS82 4.2 72.1 1.0 CA R:CYS68 4.3 82.0 1.0 CA R:HIS82 4.8 72.1 1.0 C R:LEU52 4.8 88.0 1.0 N R:HIS82 4.8 72.1 1.0 CA R:CYS56 5.0 92.4 1.0

K.Baek, D.C.Scott, L.T.Henneberg, M.T.King, M.Mann, B.A.Schulman. Systemwide Disassembly and Assembly of Scf Ubiquitin Ligase Complexes. Cell 2023.
ISSN: ISSN 1097-4172
PubMed: 37028429
DOI: 10.1016/J.CELL.2023.02.035