Zinc in PDB 7z6s: Matcap Bound to A Human 14 Protofilament Microtubule

Other elements in 7z6s:

The structure of Matcap Bound to A Human 14 Protofilament Microtubule also contains other interesting chemical elements:

Magnesium (Mg) 2 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the Matcap Bound to A Human 14 Protofilament Microtubule (pdb code 7z6s). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Matcap Bound to A Human 14 Protofilament Microtubule, PDB code: 7z6s:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 7z6s

Go back to Zinc Binding Sites List in 7z6s
Zinc binding site 1 out of 2 in the Matcap Bound to A Human 14 Protofilament Microtubule


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Matcap Bound to A Human 14 Protofilament Microtubule within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Zn501

b:48.3
occ:1.00
NE2 C:HIS280 2.2 44.4 1.0
OE1 C:GLU316 2.3 48.6 1.0
NE2 C:HIS285 2.5 41.8 1.0
OE2 C:GLU316 2.8 49.1 1.0
CD C:GLU316 2.9 48.3 1.0
CE1 C:HIS280 3.1 43.1 1.0
CD2 C:HIS280 3.2 45.0 1.0
CD2 C:HIS285 3.3 42.6 1.0
CE1 C:HIS285 3.6 42.1 1.0
OH C:TYR393 3.9 45.9 1.0
CE1 C:TYR393 4.0 40.9 1.0
ND1 C:HIS280 4.3 41.4 1.0
CG C:HIS280 4.4 43.4 1.0
CG C:GLU316 4.4 47.0 1.0
CZ C:TYR393 4.5 42.0 1.0
OE1 C:GLN281 4.5 30.0 1.0
CG C:HIS285 4.5 42.3 1.0
ND1 C:HIS285 4.6 41.9 1.0
CB C:ALA319 4.8 44.9 1.0

Zinc binding site 2 out of 2 in 7z6s

Go back to Zinc Binding Sites List in 7z6s
Zinc binding site 2 out of 2 in the Matcap Bound to A Human 14 Protofilament Microtubule


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Matcap Bound to A Human 14 Protofilament Microtubule within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Zn501

b:48.3
occ:1.00
NE2 E:HIS280 2.2 44.4 1.0
OE1 E:GLU316 2.3 48.6 1.0
NE2 E:HIS285 2.5 41.8 1.0
OE2 E:GLU316 2.8 49.1 1.0
CD E:GLU316 2.9 48.3 1.0
CE1 E:HIS280 3.1 43.1 1.0
CD2 E:HIS280 3.2 45.0 1.0
CD2 E:HIS285 3.3 42.6 1.0
CE1 E:HIS285 3.6 42.1 1.0
OH E:TYR393 3.9 45.9 1.0
CE1 E:TYR393 4.0 40.9 1.0
ND1 E:HIS280 4.3 41.4 1.0
CG E:HIS280 4.4 43.4 1.0
CG E:GLU316 4.4 47.0 1.0
NE2 E:GLN281 4.5 30.0 1.0
CZ E:TYR393 4.5 42.0 1.0
CG E:HIS285 4.5 42.3 1.0
ND1 E:HIS285 4.6 41.9 1.0
OE1 E:GLN281 4.7 30.0 1.0
CD E:GLN281 4.8 30.0 1.0
CB E:ALA319 4.8 44.9 1.0

Reference:

L.Landskron, J.Bak, A.Adamopoulos, K.Kaplani, M.Moraiti, L.G.Van Den Hengel, J.Y.Song, O.B.Bleijerveld, J.Nieuwenhuis, T.Heidebrecht, L.Henneman, M.J.Moutin, M.Barisic, S.Taraviras, A.Perrakis, T.R.Brummelkamp. Posttranslational Modification of Microtubules By the Matcap Detyrosinase. Science V. 376 N6020 2022.
ISSN: ESSN 1095-9203
PubMed: 35482892
DOI: 10.1126/SCIENCE.ABN6020
Page generated: Sat Apr 8 06:34:39 2023

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