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Zinc in PDB, part 487 (files: 19441-19480), PDB 8ana-8bep

Experimental structures of coordination spheres of Zinc (Zn) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Zinc atoms. PDB files: 19441-19480 (PDB 8ana-8bep).
  1. 8ana (Zn: 2) - Cryo-Em Structure of the Proline-Rich Antimicrobial Peptide Drosocin Bound to the 50S Ribosomal Subunit
    Other atoms: Mg (216);
  2. 8aop (Zn: 3) - Cereblon Isoform 4 From Magnetospirillum Gryphiswaldense in Complex with Compound 14R
  3. 8aoq (Zn: 3) - Cereblon Isoform 4 From Magnetospirillum Gryphiswaldense in Complex with Compound 20A
  4. 8aov (Zn: 12) - Cryoem Structure of the Chikungunya Virus NSP1 Capping Pores in Complex with Gtp
  5. 8aow (Zn: 12) - Cryoem Structure of the Chikungunya Virus NSP1 Capping Pores in Complex with M7GTP and Sah Ligands
    Other atoms: Mg (24);
  6. 8apx (Zn: 12) - Cryoem Structure of the Chikungunya Virus NSP1 Capping Pores in Covalent Complex with A 7GMP Cap Structure
  7. 8apz (Zn: 4) - Crystal Structure of Wild-Type L-N-Carbamoylase From Sinorhizobium Meliloti
    Other atoms: Fe (4);
  8. 8aq0 (Zn: 4) - Crystal Structure of L-N-Carbamoylase From Sinorhizobium Meliloti Mutant L217G/F329C
    Other atoms: Fe (4); Cl (1);
  9. 8aqs (Zn: 1) - Ba.4/5 Sars-Cov-2 Spike Bound to Human ACE2 (Local)
  10. 8at1 (Zn: 2) - Crystal Structures of Aspartate Carbamoyltransferase Ligated with Phosphonoacetamide, Malonate, and Ctp or Atp at 2.8-Angstroms Resolution and Neutral P*H
  11. 8atc (Zn: 2) - Complex of N-Phosphonacetyl-L-Aspartate with Aspartate Carbamoyltransferase. X-Ray Refinement, Analysis of Conformational Changes and Catalytic and Allosteric Mechanisms
  12. 8aut (Zn: 4) - WELO5* L221A Bound to Zn(II), Cl, 2-Oxoglutarate, and 12-Epi- Hapalindole C
    Other atoms: Cl (4);
  13. 8ava (Zn: 1) - Leukotriene A4 Hydrolase in Complex with 4-(4-Benzylphenyl)-Oxazol-2- Amine
    Other atoms: Yb (5);
  14. 8aw3 (Zn: 2) - Cryo-Em Structure of the TBADAT2/3 Deaminase in Complex with Trna
  15. 8awh (Zn: 1) - Leukotriene A4 Hydrolase in Complex with 4-(4-Benzylphenyl)-Selenazol- 2-Amine
    Other atoms: Yb (4);
  16. 8axv (Zn: 12) - Structure of An Open Form of Chikv NSP1 Capping Pores
  17. 8aza (Zn: 1) - Structure of RIP2K Dimer Bound to the Xiap BIR2 Domain
  18. 8b1v (Zn: 2) - Dihydroprecondylocarpine Acetate Synthase 2 From Tabernanthe Iboga
  19. 8b25 (Zn: 2) - Dihydroprecondylocarpine Acetate Synthase 2 From Tabernanthe Iboga - Stemmadenine Acetate Bound Structure
  20. 8b26 (Zn: 2) - Dihydroprecondylocarpine Acetate Synthase 2 From Tabernanthe Iboga
  21. 8b29 (Zn: 1) - Human Carbonic Anhydrase II Containing 6-Fluorotryptophanes.
    Other atoms: F (7);
  22. 8b2f (Zn: 1) - SH3-Like Cell Wall Binding Domain of the GH24 Family Muramidase From Trichophaea Saccata in Complex with Triglycine
  23. 8b2g (Zn: 1) - SH3-Like Domain From Penicillium Virgatum Muramidase
  24. 8b2h (Zn: 2) - Muramidase From Thermothielavioides Terrestris, Catalytic Domain
  25. 8b2n (Zn: 4) - Potempin A (Pota) From Tannerella Forsythia in Complex with the Catalytic Domain of Human Mmp-12
    Other atoms: Ca (6);
  26. 8b2q (Zn: 2) - Matrix-Metallopeptidase Inhibitor Potempin A (Pota) From Tannerella Forsythia in Complex with T. Forsythia Karilysin.
    Other atoms: Ca (1);
  27. 8b9z (Zn: 1) - Drosophila Melanogaster Complex I in the Active State (DM1)
    Other atoms: Fe (28); Na (1);
  28. 8ba0 (Zn: 1) - Drosophila Melanogaster Complex I in the Twisted State (DM2)
    Other atoms: Fe (28);
  29. 8ba5 (Zn: 3) - Crystal Structure of the DNMT3A Add Domain
    Other atoms: Mg (1);
  30. 8bal (Zn: 5) - NIAKO3494, A Bacterial Protein Structure in Glycoside Hydrolase Family 20
  31. 8bc6 (Zn: 3) - Cereblon Isoform 4 From Magnetospirillum Gryphiswaldense in Complex An Aspartimide Degron Peptide
  32. 8bc7 (Zn: 3) - Cereblon Isoform 4 From Magnetospirillum Gryphiswaldense in Complex An Aminoglutarimide Degron Peptide
  33. 8bd4 (Zn: 6) - Tniq-Capped Tns-Atp-Dsdna Complex
    Other atoms: Mg (7);
  34. 8bd5 (Zn: 2) - CAS12K-Sgrna-Dsdna-S15-Tniq-Tnsc Transposon Recruitment Complex
    Other atoms: Mg (7);
  35. 8bd8 (Zn: 2) - Crystal Structure of TRIM33 Alpha Phd-Bromo Domain in Complex with 8
    Other atoms: Ca (1);
  36. 8bd9 (Zn: 2) - Crystal Structure of TRIM33 Alpha Phd-Bromo Domain in Complex with 10
    Other atoms: Ca (1);
  37. 8bdy (Zn: 2) - Crystal Structure of TRIM33 Alpha Phd-Bromo Domain in Complex with 9
    Other atoms: Ca (1);
  38. 8bed (Zn: 1) - Cryo-Em Structure of the Arabidopsis Thaliana I+III2 Supercomplex (Ci Peripheral Tip)
    Other atoms: Fe (16);
  39. 8bef (Zn: 1) - Cryo-Em Structure of the Arabidopsis Thaliana I+III2 Supercomplex (Ci Membrane Core)
    Other atoms: Fe (1);
  40. 8bep (Zn: 2) - Cryo-Em Structure of the Arabidopsis Thaliana I+III2 Supercomplex (Ciii Mpp Domain)
Page generated: Fri Jul 28 12:58:09 2023

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