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Zinc in PDB, part 438 (files: 17481-17520), PDB 7nng-7oc4

Experimental structures of coordination spheres of Zinc (Zn) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Zinc atoms. PDB files: 17481-17520 (PDB 7nng-7oc4).
  1. 7nng (Zn: 6) - Crystal Structure of the Sars-Cov-2 Helicase in Complex with Z2327226104
  2. 7nq4 (Zn: 2) - Human Trna Guanine Transglycosylase (Tgt), Rna-Bound Covalent Intermediate
  3. 7ns4 (Zn: 2) - Catalytic Module of Yeast Chelator-Gid SR4 E3 Ubiquitin Ligase
  4. 7nse (Zn: 1) - Bovine Endothelial Nitric Oxide Synthase, H4B-Free, Adma Complex
    Other atoms: As (2); Fe (2);
  5. 7nut (Zn: 2) - Crystal Structure of Human AMDHD2 in Complex with Zn and GLCN6P
  6. 7nuu (Zn: 2) - Crystal Structure of Human AMDHD2 in Complex with Zn
  7. 7nvr (Zn: 18) - Human Mediator with Rna Polymerase II Pre-Initiation Complex
    Other atoms: Mg (1); Fe (4);
  8. 7nvs (Zn: 10) - Rna Polymerase II Core Pre-Initiation Complex with Closed Promoter Dna in Proximal Position
    Other atoms: Mg (1);
  9. 7nvt (Zn: 10) - Rna Polymerase II Core Pre-Initiation Complex with Closed Promoter Dna in Distal Position
    Other atoms: Mg (1);
  10. 7nvu (Zn: 10) - Rna Polymerase II Core Pre-Initiation Complex with Open Promoter Dna
    Other atoms: Mg (1);
  11. 7nvw (Zn: 7) - Tfiih in A Pre-Translocated State (Without Adp-BEF3)
    Other atoms: Fe (4);
  12. 7nvx (Zn: 7) - Tfiih in A Post-Translocated State (with Adp-BEF3)
    Other atoms: F (3); Mg (1); Fe (4);
  13. 7nvy (Zn: 17) - Rna Polymerase II Pre-Initiation Complex with Closed Promoter Dna in Proximal Position
    Other atoms: Fe (4); Mg (1);
  14. 7nvz (Zn: 17) - Rna Polymerase II Pre-Initiation Complex with Closed Promoter Dna in Distal Position
    Other atoms: Mg (1); Fe (4);
  15. 7nw0 (Zn: 15) - Rna Polymerase II Pre-Initiation Complex with Open Promoter Dna
    Other atoms: F (3); Fe (4); Mg (2);
  16. 7nx4 (Zn: 1) - Crystal Structure of the Tg and Egf-Like Domains of Alk
    Other atoms: Ni (2);
  17. 7nz7 (Zn: 2) - Crystal Structure of Mouse ADAT2/ADAT3 Trna Deamination Complex 1
  18. 7nz8 (Zn: 2) - Crystal Structure of Mouse ADAT2/ADAT3 Trna Deamination Complex 2
  19. 7nz9 (Zn: 2) - Crystal Structure of Mouse ADAT2/ADAT3 Trna Deamination Complex V128L Mutant
  20. 7o0o (Zn: 3) - Crystal Structure of the B3 Metallo-Beta-Lactamase L1 with Hydrolysed Ertapenem
  21. 7o2a (Zn: 3) - X-Ray Structure of SMYD3 in Complex with Benzodiazepine-Type Inhibitor Compound 15
  22. 7o2b (Zn: 3) - X-Ray Structure of SMYD3 in Complex with Benzodiazepine-Type Inhibitor 6
    Other atoms: F (1);
  23. 7o2c (Zn: 3) - X-Ray Structure of SMYD3 in Complex with the Benzodiazepine-Based Probe Bay-6035
  24. 7o2p (Zn: 2) - Crystal Structure of Danio Rerio Histone Deacetylase 6 Catalytic Domain 2 in Complex with ITF3756
    Other atoms: K (4); I (4);
  25. 7o2r (Zn: 1) - Crystal Structure of Danio Rerio Histone Deacetylase 6 Catalytic Domain 2 in Complex with ITF3985
    Other atoms: F (2); I (6); K (2);
  26. 7o37 (Zn: 1) - Murine Supercomplex CIII2CIV in the Assembled Locked Conformation
    Other atoms: Fe (12); Na (1); Cu (3); Mg (1);
  27. 7o3c (Zn: 1) - Murine Supercomplex CIII2CIV in the Mature Unlocked Conformation
    Other atoms: Na (1); Fe (12); Cu (3); Mg (1);
  28. 7o3e (Zn: 1) - Murine Supercomplex CIII2CIV in the Intermediate Locked Conformation
    Other atoms: Na (1); Fe (8); Cu (3); Mg (1);
  29. 7o4e (Zn: 4) - The Dyw Domain of A. Thaliana OTP86 in Its Inactive State
  30. 7o4f (Zn: 8) - The Dyw Domain of A. Thaliana OTP86 in Its Active State
  31. 7o4i (Zn: 17) - Yeast Rna Polymerase II Transcription Pre-Initiation Complex with Initial Transcription Bubble
    Other atoms: F (3); Fe (4); Mg (2);
  32. 7o4j (Zn: 17) - Yeast Rna Polymerase II Transcription Pre-Initiation Complex (Consensus)
    Other atoms: Mg (2); Fe (4); F (3);
  33. 7o4k (Zn: 10) - Yeast Tfiih in the Contracted State Within the Pre-Initiation Complex
    Other atoms: F (3); Fe (4); Mg (1);
  34. 7o4l (Zn: 11) - Yeast Tfiih in the Expanded State Within the Pre-Initiation Complex
    Other atoms: F (3); Fe (4); Mg (1);
  35. 7o6y (Zn: 1) - Cryo-Em Structure of Respiratory Complex I Under Turnover
    Other atoms: Fe (28);
  36. 7o71 (Zn: 1) - Cryo-Em Structure of A Respiratory Complex I
    Other atoms: Fe (28);
  37. 7o72 (Zn: 17) - Yeast Rna Polymerase II Transcription Pre-Initiation Complex with Closed Promoter Dna
    Other atoms: Mg (2); Fe (4); F (3);
  38. 7o73 (Zn: 17) - Yeast Rna Polymerase II Transcription Pre-Initiation Complex with Closed Distorted Promoter Dna
    Other atoms: Fe (4); F (3); Mg (2);
  39. 7o75 (Zn: 17) - Yeast Rna Polymerase II Transcription Pre-Initiation Complex with Open Promoter Dna
    Other atoms: Mg (2); Fe (4); F (3);
  40. 7oc4 (Zn: 2) - Alpha-Humulene Synthase ASR6 From Sarocladium Schorii in Complex with Thiolodiphosphate and A Cyclized Reaction Product.
    Other atoms: Mg (6);
Page generated: Thu Nov 25 10:57:00 2021

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