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Zinc in PDB 7e4s: Crystal Structure of Lactobacillus Rhamnosus 4-Deoxy-L-Threo-5- Hexosulose-Uronate Ketol-Isomerase Kdui Complexed with Hepes
Enzymatic activity of Crystal Structure of Lactobacillus Rhamnosus 4-Deoxy-L-Threo-5- Hexosulose-Uronate Ketol-Isomerase Kdui Complexed with Hepes
All present enzymatic activity of Crystal Structure of Lactobacillus Rhamnosus 4-Deoxy-L-Threo-5- Hexosulose-Uronate Ketol-Isomerase Kdui Complexed with Hepes:
5.3.1.17;
5.3.1.17;
Protein crystallography data
The structure of Crystal Structure of Lactobacillus Rhamnosus 4-Deoxy-L-Threo-5- Hexosulose-Uronate Ketol-Isomerase Kdui Complexed with Hepes, PDB code: 7e4s
was solved by
Y.Yamamoto,
R.Takase,
B.Mikami,
W.Hashimoto,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 47.31 / 2.79 |
| Space group | C 1 2 1 |
| Cell size a, b, c (Å), α, β, γ (°) | 94.29, 189.25, 117.8, 90, 106.24, 90 |
| R / Rfree (%) | 16.5 / 23.8 |
Zinc Binding Sites:
The binding sites of Zinc atom in the Crystal Structure of Lactobacillus Rhamnosus 4-Deoxy-L-Threo-5- Hexosulose-Uronate Ketol-Isomerase Kdui Complexed with Hepes
(pdb code 7e4s). This binding sites where shown within
5.0 Angstroms radius around Zinc atom.
In total 6 binding sites of Zinc where determined in the Crystal Structure of Lactobacillus Rhamnosus 4-Deoxy-L-Threo-5- Hexosulose-Uronate Ketol-Isomerase Kdui Complexed with Hepes, PDB code: 7e4s:
Jump to Zinc binding site number: 1; 2; 3; 4; 5; 6;
In total 6 binding sites of Zinc where determined in the Crystal Structure of Lactobacillus Rhamnosus 4-Deoxy-L-Threo-5- Hexosulose-Uronate Ketol-Isomerase Kdui Complexed with Hepes, PDB code: 7e4s:
Jump to Zinc binding site number: 1; 2; 3; 4; 5; 6;
Zinc binding site 1 out of 6 in 7e4s
Go back to
Zinc Binding Sites List in 7e4s
Zinc binding site 1 out
of 6 in the Crystal Structure of Lactobacillus Rhamnosus 4-Deoxy-L-Threo-5- Hexosulose-Uronate Ketol-Isomerase Kdui Complexed with Hepes
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Zinc with other atoms in the Zn binding
site number 1 of Crystal Structure of Lactobacillus Rhamnosus 4-Deoxy-L-Threo-5- Hexosulose-Uronate Ketol-Isomerase Kdui Complexed with Hepes within 5.0Å range:
|
Zinc binding site 2 out of 6 in 7e4s
Go back to
Zinc Binding Sites List in 7e4s
Zinc binding site 2 out
of 6 in the Crystal Structure of Lactobacillus Rhamnosus 4-Deoxy-L-Threo-5- Hexosulose-Uronate Ketol-Isomerase Kdui Complexed with Hepes
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Zinc with other atoms in the Zn binding
site number 2 of Crystal Structure of Lactobacillus Rhamnosus 4-Deoxy-L-Threo-5- Hexosulose-Uronate Ketol-Isomerase Kdui Complexed with Hepes within 5.0Å range:
|
Zinc binding site 3 out of 6 in 7e4s
Go back to
Zinc Binding Sites List in 7e4s
Zinc binding site 3 out
of 6 in the Crystal Structure of Lactobacillus Rhamnosus 4-Deoxy-L-Threo-5- Hexosulose-Uronate Ketol-Isomerase Kdui Complexed with Hepes
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Zinc with other atoms in the Zn binding
site number 3 of Crystal Structure of Lactobacillus Rhamnosus 4-Deoxy-L-Threo-5- Hexosulose-Uronate Ketol-Isomerase Kdui Complexed with Hepes within 5.0Å range:
|
Zinc binding site 4 out of 6 in 7e4s
Go back to
Zinc Binding Sites List in 7e4s
Zinc binding site 4 out
of 6 in the Crystal Structure of Lactobacillus Rhamnosus 4-Deoxy-L-Threo-5- Hexosulose-Uronate Ketol-Isomerase Kdui Complexed with Hepes
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Zinc with other atoms in the Zn binding
site number 4 of Crystal Structure of Lactobacillus Rhamnosus 4-Deoxy-L-Threo-5- Hexosulose-Uronate Ketol-Isomerase Kdui Complexed with Hepes within 5.0Å range:
|
Zinc binding site 5 out of 6 in 7e4s
Go back to
Zinc Binding Sites List in 7e4s
Zinc binding site 5 out
of 6 in the Crystal Structure of Lactobacillus Rhamnosus 4-Deoxy-L-Threo-5- Hexosulose-Uronate Ketol-Isomerase Kdui Complexed with Hepes
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Zinc with other atoms in the Zn binding
site number 5 of Crystal Structure of Lactobacillus Rhamnosus 4-Deoxy-L-Threo-5- Hexosulose-Uronate Ketol-Isomerase Kdui Complexed with Hepes within 5.0Å range:
|
Zinc binding site 6 out of 6 in 7e4s
Go back to
Zinc Binding Sites List in 7e4s
Zinc binding site 6 out
of 6 in the Crystal Structure of Lactobacillus Rhamnosus 4-Deoxy-L-Threo-5- Hexosulose-Uronate Ketol-Isomerase Kdui Complexed with Hepes
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Zinc with other atoms in the Zn binding
site number 6 of Crystal Structure of Lactobacillus Rhamnosus 4-Deoxy-L-Threo-5- Hexosulose-Uronate Ketol-Isomerase Kdui Complexed with Hepes within 5.0Å range:
|
Reference:
Y.Yamamoto,
R.Takase,
B.Mikami,
W.Hashimoto.
Crystal Structure of Lactobacillus Rhamnosus 4-Deoxy-L-Threo-5-Hexosulose-Uronate Ketol-Isomerase Kdui Complexed with Hepes To Be Published.
Page generated: Tue Oct 29 19:33:47 2024
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