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Zinc in PDB 7e4t: Human TRPC5 Apo State Structure at 3 Angstrom

Other elements in 7e4t:

The structure of Human TRPC5 Apo State Structure at 3 Angstrom also contains other interesting chemical elements:

Calcium (Ca) 4 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the Human TRPC5 Apo State Structure at 3 Angstrom (pdb code 7e4t). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 4 binding sites of Zinc where determined in the Human TRPC5 Apo State Structure at 3 Angstrom, PDB code: 7e4t:
Jump to Zinc binding site number: 1; 2; 3; 4;

Zinc binding site 1 out of 4 in 7e4t

Go back to Zinc Binding Sites List in 7e4t
Zinc binding site 1 out of 4 in the Human TRPC5 Apo State Structure at 3 Angstrom


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Human TRPC5 Apo State Structure at 3 Angstrom within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn804

b:214.7
occ:1.00
 ND1 A:HIS172 2.1 178.0 1.0
SG A:CYS176 2.4 172.1 1.0
SG A:CYS178 2.4 194.9 1.0
SG A:CYS181 2.4 197.7 1.0
CE1 A:HIS172 3.1 174.3 1.0
CG A:HIS172 3.1 169.3 1.0
CB A:HIS172 3.4 166.0 1.0
CB A:CYS178 3.4 189.2 1.0
CB A:CYS181 3.5 184.3 1.0
CB A:CYS176 3.5 166.3 1.0
N A:CYS178 4.1 171.1 1.0
NE2 A:HIS172 4.2 170.7 1.0
N A:CYS181 4.2 187.6 1.0
CD2 A:HIS172 4.2 165.0 1.0
CA A:CYS178 4.3 183.3 1.0
CA A:CYS181 4.4 184.3 1.0
CA A:CYS176 4.8 173.2 1.0
CA A:HIS172 4.8 152.4 1.0
C A:CYS176 4.9 182.3 1.0
C A:CYS178 4.9 188.9 1.0
N A:ASN177 5.0 183.3 1.0

Zinc binding site 2 out of 4 in 7e4t

Go back to Zinc Binding Sites List in 7e4t
Zinc binding site 2 out of 4 in the Human TRPC5 Apo State Structure at 3 Angstrom


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Human TRPC5 Apo State Structure at 3 Angstrom within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn804

b:214.7
occ:1.00
 ND1 B:HIS172 2.1 178.0 1.0
SG B:CYS176 2.4 172.1 1.0
SG B:CYS178 2.4 194.9 1.0
SG B:CYS181 2.4 197.7 1.0
CE1 B:HIS172 3.1 174.3 1.0
CG B:HIS172 3.1 169.3 1.0
CB B:HIS172 3.4 166.0 1.0
CB B:CYS178 3.4 189.2 1.0
CB B:CYS181 3.5 184.3 1.0
CB B:CYS176 3.5 166.3 1.0
N B:CYS178 4.1 171.1 1.0
NE2 B:HIS172 4.2 170.7 1.0
N B:CYS181 4.2 187.6 1.0
CD2 B:HIS172 4.2 165.0 1.0
CA B:CYS178 4.3 183.3 1.0
CA B:CYS181 4.4 184.3 1.0
CA B:CYS176 4.8 173.2 1.0
CA B:HIS172 4.8 152.4 1.0
C B:CYS176 4.9 182.3 1.0
C B:CYS178 4.9 188.9 1.0
N B:ASN177 5.0 183.3 1.0

Zinc binding site 3 out of 4 in 7e4t

Go back to Zinc Binding Sites List in 7e4t
Zinc binding site 3 out of 4 in the Human TRPC5 Apo State Structure at 3 Angstrom


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 3 of Human TRPC5 Apo State Structure at 3 Angstrom within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Zn804

b:214.7
occ:1.00
 ND1 C:HIS172 2.1 178.0 1.0
SG C:CYS176 2.4 172.1 1.0
SG C:CYS178 2.4 194.9 1.0
SG C:CYS181 2.4 197.7 1.0
CE1 C:HIS172 3.1 174.3 1.0
CG C:HIS172 3.1 169.3 1.0
CB C:HIS172 3.4 166.0 1.0
CB C:CYS178 3.4 189.2 1.0
CB C:CYS181 3.5 184.3 1.0
CB C:CYS176 3.5 166.3 1.0
N C:CYS178 4.1 171.1 1.0
NE2 C:HIS172 4.2 170.7 1.0
N C:CYS181 4.2 187.6 1.0
CD2 C:HIS172 4.2 165.0 1.0
CA C:CYS178 4.3 183.3 1.0
CA C:CYS181 4.4 184.3 1.0
CA C:CYS176 4.8 173.2 1.0
CA C:HIS172 4.8 152.4 1.0
C C:CYS176 4.9 182.3 1.0
C C:CYS178 4.9 188.9 1.0
N C:ASN177 5.0 183.3 1.0

Zinc binding site 4 out of 4 in 7e4t

Go back to Zinc Binding Sites List in 7e4t
Zinc binding site 4 out of 4 in the Human TRPC5 Apo State Structure at 3 Angstrom


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 4 of Human TRPC5 Apo State Structure at 3 Angstrom within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Zn804

b:214.7
occ:1.00
 ND1 D:HIS172 2.1 178.0 1.0
SG D:CYS176 2.4 172.1 1.0
SG D:CYS178 2.4 194.9 1.0
SG D:CYS181 2.4 197.7 1.0
CE1 D:HIS172 3.1 174.3 1.0
CG D:HIS172 3.1 169.3 1.0
CB D:HIS172 3.4 166.0 1.0
CB D:CYS178 3.4 189.2 1.0
CB D:CYS181 3.5 184.3 1.0
CB D:CYS176 3.5 166.3 1.0
N D:CYS178 4.1 171.1 1.0
NE2 D:HIS172 4.2 170.7 1.0
N D:CYS181 4.2 187.6 1.0
CD2 D:HIS172 4.2 165.0 1.0
CA D:CYS178 4.3 183.3 1.0
CA D:CYS181 4.4 184.3 1.0
CA D:CYS176 4.8 173.2 1.0
CA D:HIS172 4.8 152.4 1.0
C D:CYS176 4.9 182.3 1.0
C D:CYS178 4.9 188.9 1.0
N D:ASN177 5.0 183.3 1.0

Reference:

L.Chen, K.Song, M.Wei, W.Guo. Human TRPC5 Apo State Structure at 3 Angstrom To Be Published.
Page generated: Tue Oct 29 19:33:59 2024

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