Zinc in PDB 7e4t: Human TRPC5 Apo State Structure at 3 Angstrom
Other elements in 7e4t:
The structure of Human TRPC5 Apo State Structure at 3 Angstrom also contains other interesting chemical elements:
Zinc Binding Sites:
The binding sites of Zinc atom in the Human TRPC5 Apo State Structure at 3 Angstrom
(pdb code 7e4t). This binding sites where shown within
5.0 Angstroms radius around Zinc atom.
In total 4 binding sites of Zinc where determined in the
Human TRPC5 Apo State Structure at 3 Angstrom, PDB code: 7e4t:
Jump to Zinc binding site number:
1;
2;
3;
4;
Zinc binding site 1 out
of 4 in 7e4t
Go back to
Zinc Binding Sites List in 7e4t
Zinc binding site 1 out
of 4 in the Human TRPC5 Apo State Structure at 3 Angstrom
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 1 of Human TRPC5 Apo State Structure at 3 Angstrom within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn804
b:214.7
occ:1.00
|
ND1
|
A:HIS172
|
2.1
|
178.0
|
1.0
|
SG
|
A:CYS176
|
2.4
|
172.1
|
1.0
|
SG
|
A:CYS178
|
2.4
|
194.9
|
1.0
|
SG
|
A:CYS181
|
2.4
|
197.7
|
1.0
|
CE1
|
A:HIS172
|
3.1
|
174.3
|
1.0
|
CG
|
A:HIS172
|
3.1
|
169.3
|
1.0
|
CB
|
A:HIS172
|
3.4
|
166.0
|
1.0
|
CB
|
A:CYS178
|
3.4
|
189.2
|
1.0
|
CB
|
A:CYS181
|
3.5
|
184.3
|
1.0
|
CB
|
A:CYS176
|
3.5
|
166.3
|
1.0
|
N
|
A:CYS178
|
4.1
|
171.1
|
1.0
|
NE2
|
A:HIS172
|
4.2
|
170.7
|
1.0
|
N
|
A:CYS181
|
4.2
|
187.6
|
1.0
|
CD2
|
A:HIS172
|
4.2
|
165.0
|
1.0
|
CA
|
A:CYS178
|
4.3
|
183.3
|
1.0
|
CA
|
A:CYS181
|
4.4
|
184.3
|
1.0
|
CA
|
A:CYS176
|
4.8
|
173.2
|
1.0
|
CA
|
A:HIS172
|
4.8
|
152.4
|
1.0
|
C
|
A:CYS176
|
4.9
|
182.3
|
1.0
|
C
|
A:CYS178
|
4.9
|
188.9
|
1.0
|
N
|
A:ASN177
|
5.0
|
183.3
|
1.0
|
|
Zinc binding site 2 out
of 4 in 7e4t
Go back to
Zinc Binding Sites List in 7e4t
Zinc binding site 2 out
of 4 in the Human TRPC5 Apo State Structure at 3 Angstrom
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 2 of Human TRPC5 Apo State Structure at 3 Angstrom within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Zn804
b:214.7
occ:1.00
|
ND1
|
B:HIS172
|
2.1
|
178.0
|
1.0
|
SG
|
B:CYS176
|
2.4
|
172.1
|
1.0
|
SG
|
B:CYS178
|
2.4
|
194.9
|
1.0
|
SG
|
B:CYS181
|
2.4
|
197.7
|
1.0
|
CE1
|
B:HIS172
|
3.1
|
174.3
|
1.0
|
CG
|
B:HIS172
|
3.1
|
169.3
|
1.0
|
CB
|
B:HIS172
|
3.4
|
166.0
|
1.0
|
CB
|
B:CYS178
|
3.4
|
189.2
|
1.0
|
CB
|
B:CYS181
|
3.5
|
184.3
|
1.0
|
CB
|
B:CYS176
|
3.5
|
166.3
|
1.0
|
N
|
B:CYS178
|
4.1
|
171.1
|
1.0
|
NE2
|
B:HIS172
|
4.2
|
170.7
|
1.0
|
N
|
B:CYS181
|
4.2
|
187.6
|
1.0
|
CD2
|
B:HIS172
|
4.2
|
165.0
|
1.0
|
CA
|
B:CYS178
|
4.3
|
183.3
|
1.0
|
CA
|
B:CYS181
|
4.4
|
184.3
|
1.0
|
CA
|
B:CYS176
|
4.8
|
173.2
|
1.0
|
CA
|
B:HIS172
|
4.8
|
152.4
|
1.0
|
C
|
B:CYS176
|
4.9
|
182.3
|
1.0
|
C
|
B:CYS178
|
4.9
|
188.9
|
1.0
|
N
|
B:ASN177
|
5.0
|
183.3
|
1.0
|
|
Zinc binding site 3 out
of 4 in 7e4t
Go back to
Zinc Binding Sites List in 7e4t
Zinc binding site 3 out
of 4 in the Human TRPC5 Apo State Structure at 3 Angstrom
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 3 of Human TRPC5 Apo State Structure at 3 Angstrom within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Zn804
b:214.7
occ:1.00
|
ND1
|
C:HIS172
|
2.1
|
178.0
|
1.0
|
SG
|
C:CYS176
|
2.4
|
172.1
|
1.0
|
SG
|
C:CYS178
|
2.4
|
194.9
|
1.0
|
SG
|
C:CYS181
|
2.4
|
197.7
|
1.0
|
CE1
|
C:HIS172
|
3.1
|
174.3
|
1.0
|
CG
|
C:HIS172
|
3.1
|
169.3
|
1.0
|
CB
|
C:HIS172
|
3.4
|
166.0
|
1.0
|
CB
|
C:CYS178
|
3.4
|
189.2
|
1.0
|
CB
|
C:CYS181
|
3.5
|
184.3
|
1.0
|
CB
|
C:CYS176
|
3.5
|
166.3
|
1.0
|
N
|
C:CYS178
|
4.1
|
171.1
|
1.0
|
NE2
|
C:HIS172
|
4.2
|
170.7
|
1.0
|
N
|
C:CYS181
|
4.2
|
187.6
|
1.0
|
CD2
|
C:HIS172
|
4.2
|
165.0
|
1.0
|
CA
|
C:CYS178
|
4.3
|
183.3
|
1.0
|
CA
|
C:CYS181
|
4.4
|
184.3
|
1.0
|
CA
|
C:CYS176
|
4.8
|
173.2
|
1.0
|
CA
|
C:HIS172
|
4.8
|
152.4
|
1.0
|
C
|
C:CYS176
|
4.9
|
182.3
|
1.0
|
C
|
C:CYS178
|
4.9
|
188.9
|
1.0
|
N
|
C:ASN177
|
5.0
|
183.3
|
1.0
|
|
Zinc binding site 4 out
of 4 in 7e4t
Go back to
Zinc Binding Sites List in 7e4t
Zinc binding site 4 out
of 4 in the Human TRPC5 Apo State Structure at 3 Angstrom
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 4 of Human TRPC5 Apo State Structure at 3 Angstrom within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Zn804
b:214.7
occ:1.00
|
ND1
|
D:HIS172
|
2.1
|
178.0
|
1.0
|
SG
|
D:CYS176
|
2.4
|
172.1
|
1.0
|
SG
|
D:CYS178
|
2.4
|
194.9
|
1.0
|
SG
|
D:CYS181
|
2.4
|
197.7
|
1.0
|
CE1
|
D:HIS172
|
3.1
|
174.3
|
1.0
|
CG
|
D:HIS172
|
3.1
|
169.3
|
1.0
|
CB
|
D:HIS172
|
3.4
|
166.0
|
1.0
|
CB
|
D:CYS178
|
3.4
|
189.2
|
1.0
|
CB
|
D:CYS181
|
3.5
|
184.3
|
1.0
|
CB
|
D:CYS176
|
3.5
|
166.3
|
1.0
|
N
|
D:CYS178
|
4.1
|
171.1
|
1.0
|
NE2
|
D:HIS172
|
4.2
|
170.7
|
1.0
|
N
|
D:CYS181
|
4.2
|
187.6
|
1.0
|
CD2
|
D:HIS172
|
4.2
|
165.0
|
1.0
|
CA
|
D:CYS178
|
4.3
|
183.3
|
1.0
|
CA
|
D:CYS181
|
4.4
|
184.3
|
1.0
|
CA
|
D:CYS176
|
4.8
|
173.2
|
1.0
|
CA
|
D:HIS172
|
4.8
|
152.4
|
1.0
|
C
|
D:CYS176
|
4.9
|
182.3
|
1.0
|
C
|
D:CYS178
|
4.9
|
188.9
|
1.0
|
N
|
D:ASN177
|
5.0
|
183.3
|
1.0
|
|
Reference:
L.Chen,
K.Song,
M.Wei,
W.Guo.
Human TRPC5 Apo State Structure at 3 Angstrom To Be Published.
Page generated: Tue Oct 29 19:33:59 2024
|