Zinc in PDB 7e4t: Human TRPC5 Apo State Structure at 3 Angstrom

Other elements in 7e4t:

The structure of Human TRPC5 Apo State Structure at 3 Angstrom also contains other interesting chemical elements:

Calcium (Ca) 4 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the Human TRPC5 Apo State Structure at 3 Angstrom (pdb code 7e4t). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 4 binding sites of Zinc where determined in the Human TRPC5 Apo State Structure at 3 Angstrom, PDB code: 7e4t:
Jump to Zinc binding site number: 1; 2; 3; 4;

Zinc binding site 1 out of 4 in 7e4t

Go back to Zinc Binding Sites List in 7e4t
Zinc binding site 1 out of 4 in the Human TRPC5 Apo State Structure at 3 Angstrom


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Human TRPC5 Apo State Structure at 3 Angstrom within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn804

b:214.7
occ:1.00
 ND1 A:HIS172 2.1 178.0 1.0
SG A:CYS176 2.4 172.1 1.0
SG A:CYS178 2.4 194.9 1.0
SG A:CYS181 2.4 197.7 1.0
CE1 A:HIS172 3.1 174.3 1.0
CG A:HIS172 3.1 169.3 1.0
CB A:HIS172 3.4 166.0 1.0
CB A:CYS178 3.4 189.2 1.0
CB A:CYS181 3.5 184.3 1.0
CB A:CYS176 3.5 166.3 1.0
N A:CYS178 4.1 171.1 1.0
NE2 A:HIS172 4.2 170.7 1.0
N A:CYS181 4.2 187.6 1.0
CD2 A:HIS172 4.2 165.0 1.0
CA A:CYS178 4.3 183.3 1.0
CA A:CYS181 4.4 184.3 1.0
CA A:CYS176 4.8 173.2 1.0
CA A:HIS172 4.8 152.4 1.0
C A:CYS176 4.9 182.3 1.0
C A:CYS178 4.9 188.9 1.0
N A:ASN177 5.0 183.3 1.0

Zinc binding site 2 out of 4 in 7e4t

Go back to Zinc Binding Sites List in 7e4t
Zinc binding site 2 out of 4 in the Human TRPC5 Apo State Structure at 3 Angstrom


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Human TRPC5 Apo State Structure at 3 Angstrom within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn804

b:214.7
occ:1.00
 ND1 B:HIS172 2.1 178.0 1.0
SG B:CYS176 2.4 172.1 1.0
SG B:CYS178 2.4 194.9 1.0
SG B:CYS181 2.4 197.7 1.0
CE1 B:HIS172 3.1 174.3 1.0
CG B:HIS172 3.1 169.3 1.0
CB B:HIS172 3.4 166.0 1.0
CB B:CYS178 3.4 189.2 1.0
CB B:CYS181 3.5 184.3 1.0
CB B:CYS176 3.5 166.3 1.0
N B:CYS178 4.1 171.1 1.0
NE2 B:HIS172 4.2 170.7 1.0
N B:CYS181 4.2 187.6 1.0
CD2 B:HIS172 4.2 165.0 1.0
CA B:CYS178 4.3 183.3 1.0
CA B:CYS181 4.4 184.3 1.0
CA B:CYS176 4.8 173.2 1.0
CA B:HIS172 4.8 152.4 1.0
C B:CYS176 4.9 182.3 1.0
C B:CYS178 4.9 188.9 1.0
N B:ASN177 5.0 183.3 1.0

Zinc binding site 3 out of 4 in 7e4t

Go back to Zinc Binding Sites List in 7e4t
Zinc binding site 3 out of 4 in the Human TRPC5 Apo State Structure at 3 Angstrom


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 3 of Human TRPC5 Apo State Structure at 3 Angstrom within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Zn804

b:214.7
occ:1.00
 ND1 C:HIS172 2.1 178.0 1.0
SG C:CYS176 2.4 172.1 1.0
SG C:CYS178 2.4 194.9 1.0
SG C:CYS181 2.4 197.7 1.0
CE1 C:HIS172 3.1 174.3 1.0
CG C:HIS172 3.1 169.3 1.0
CB C:HIS172 3.4 166.0 1.0
CB C:CYS178 3.4 189.2 1.0
CB C:CYS181 3.5 184.3 1.0
CB C:CYS176 3.5 166.3 1.0
N C:CYS178 4.1 171.1 1.0
NE2 C:HIS172 4.2 170.7 1.0
N C:CYS181 4.2 187.6 1.0
CD2 C:HIS172 4.2 165.0 1.0
CA C:CYS178 4.3 183.3 1.0
CA C:CYS181 4.4 184.3 1.0
CA C:CYS176 4.8 173.2 1.0
CA C:HIS172 4.8 152.4 1.0
C C:CYS176 4.9 182.3 1.0
C C:CYS178 4.9 188.9 1.0
N C:ASN177 5.0 183.3 1.0

Zinc binding site 4 out of 4 in 7e4t

Go back to Zinc Binding Sites List in 7e4t
Zinc binding site 4 out of 4 in the Human TRPC5 Apo State Structure at 3 Angstrom


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 4 of Human TRPC5 Apo State Structure at 3 Angstrom within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Zn804

b:214.7
occ:1.00
 ND1 D:HIS172 2.1 178.0 1.0
SG D:CYS176 2.4 172.1 1.0
SG D:CYS178 2.4 194.9 1.0
SG D:CYS181 2.4 197.7 1.0
CE1 D:HIS172 3.1 174.3 1.0
CG D:HIS172 3.1 169.3 1.0
CB D:HIS172 3.4 166.0 1.0
CB D:CYS178 3.4 189.2 1.0
CB D:CYS181 3.5 184.3 1.0
CB D:CYS176 3.5 166.3 1.0
N D:CYS178 4.1 171.1 1.0
NE2 D:HIS172 4.2 170.7 1.0
N D:CYS181 4.2 187.6 1.0
CD2 D:HIS172 4.2 165.0 1.0
CA D:CYS178 4.3 183.3 1.0
CA D:CYS181 4.4 184.3 1.0
CA D:CYS176 4.8 173.2 1.0
CA D:HIS172 4.8 152.4 1.0
C D:CYS176 4.9 182.3 1.0
C D:CYS178 4.9 188.9 1.0
N D:ASN177 5.0 183.3 1.0

Reference:

L.Chen, K.Song, M.Wei, W.Guo. Human TRPC5 Apo State Structure at 3 Angstrom To Be Published.
Page generated: Sat Apr 3 18:35:23 2021

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy