Zinc in PDB 7e3v: Metallo Beta-Lactamase Fold Protein (Camp Free)
Protein crystallography data
The structure of Metallo Beta-Lactamase Fold Protein (Camp Free), PDB code: 7e3v
was solved by
K.-Y.Lee,
D.-G.Kim,
B.-J.Lee,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
|
Resolution Low / High (Å)
|
29.83 /
2.05
|
|
Space group
|
P 21 21 21
|
|
Cell size a, b, c (Å), α, β, γ (°)
|
69.947,
120.807,
186.639,
90,
90,
90
|
|
R / Rfree (%)
|
23.8 /
27.7
|
Other elements in 7e3v:
The structure of Metallo Beta-Lactamase Fold Protein (Camp Free) also contains other interesting chemical elements:
Zinc Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
12;
Binding sites:
The binding sites of Zinc atom in the Metallo Beta-Lactamase Fold Protein (Camp Free)
(pdb code 7e3v). This binding sites where shown within
5.0 Angstroms radius around Zinc atom.
In total 12 binding sites of Zinc where determined in the
Metallo Beta-Lactamase Fold Protein (Camp Free), PDB code: 7e3v:
Jump to Zinc binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Zinc binding site 1 out
of 12 in 7e3v
Go back to
Zinc Binding Sites List in 7e3v
Zinc binding site 1 out
of 12 in the Metallo Beta-Lactamase Fold Protein (Camp Free)
 Mono view
 Stereo pair view
|
|
A full contact list of Zinc with other atoms in the Zn binding
site number 1 of Metallo Beta-Lactamase Fold Protein (Camp Free) within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn305
b:33.6
occ:0.50
|
NI
|
A:NI303
|
0.1
|
33.8
|
0.5
|
|
NE2
|
A:HIS110
|
2.1
|
24.4
|
1.0
|
|
ND1
|
A:HIS50
|
2.2
|
26.0
|
1.0
|
|
NE2
|
A:HIS48
|
2.2
|
25.4
|
1.0
|
|
OD2
|
A:ASP144
|
2.5
|
30.4
|
1.0
|
|
CD2
|
A:HIS110
|
2.9
|
25.2
|
1.0
|
|
CE1
|
A:HIS50
|
3.1
|
27.7
|
1.0
|
|
CD2
|
A:HIS48
|
3.1
|
25.5
|
1.0
|
|
CG
|
A:HIS50
|
3.2
|
27.2
|
1.0
|
|
NI
|
A:NI304
|
3.2
|
41.1
|
0.5
|
|
CE1
|
A:HIS110
|
3.3
|
24.8
|
1.0
|
|
ZN
|
A:ZN306
|
3.3
|
39.1
|
0.5
|
|
CE1
|
A:HIS48
|
3.3
|
25.3
|
1.0
|
|
CG
|
A:ASP144
|
3.4
|
27.3
|
1.0
|
|
CB
|
A:HIS50
|
3.5
|
26.9
|
1.0
|
|
CB
|
A:ASP144
|
3.8
|
26.9
|
1.0
|
|
NE2
|
A:HIS53
|
4.1
|
29.6
|
1.0
|
|
CD2
|
A:HIS53
|
4.1
|
29.3
|
1.0
|
|
CG
|
A:HIS110
|
4.1
|
24.4
|
1.0
|
|
NE2
|
A:HIS50
|
4.2
|
26.1
|
1.0
|
|
ND1
|
A:HIS110
|
4.3
|
24.7
|
1.0
|
|
CD2
|
A:HIS50
|
4.3
|
26.8
|
1.0
|
|
CG
|
A:HIS48
|
4.3
|
24.8
|
1.0
|
|
ND1
|
A:HIS48
|
4.3
|
24.5
|
1.0
|
|
OD1
|
A:ASP52
|
4.5
|
29.1
|
1.0
|
|
OD1
|
A:ASP144
|
4.5
|
30.0
|
1.0
|
|
O
|
A:SER111
|
4.7
|
22.2
|
1.0
|
|
OD2
|
A:ASP52
|
4.8
|
30.2
|
1.0
|
|
CA
|
A:HIS50
|
4.9
|
26.6
|
1.0
|
|
Zinc binding site 2 out
of 12 in 7e3v
Go back to
Zinc Binding Sites List in 7e3v
Zinc binding site 2 out
of 12 in the Metallo Beta-Lactamase Fold Protein (Camp Free)
 Mono view
 Stereo pair view
|
|
A full contact list of Zinc with other atoms in the Zn binding
site number 2 of Metallo Beta-Lactamase Fold Protein (Camp Free) within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn306
b:39.1
occ:0.50
|
NI
|
A:NI304
|
0.1
|
41.1
|
0.5
|
|
OD2
|
A:ASP144
|
2.1
|
30.4
|
1.0
|
|
NE2
|
A:HIS53
|
2.2
|
29.6
|
1.0
|
|
NE2
|
A:HIS195
|
2.2
|
27.3
|
1.0
|
|
OD2
|
A:ASP52
|
2.4
|
30.2
|
1.0
|
|
CG
|
A:ASP144
|
3.0
|
27.3
|
1.0
|
|
CD2
|
A:HIS53
|
3.0
|
29.3
|
1.0
|
|
CD2
|
A:HIS195
|
3.0
|
26.1
|
1.0
|
|
NI
|
A:NI303
|
3.2
|
33.8
|
0.5
|
|
OD1
|
A:ASP144
|
3.2
|
30.0
|
1.0
|
|
ZN
|
A:ZN305
|
3.3
|
33.6
|
0.5
|
|
CE1
|
A:HIS195
|
3.3
|
25.9
|
1.0
|
|
CE1
|
A:HIS53
|
3.3
|
31.6
|
1.0
|
|
CG
|
A:ASP52
|
3.3
|
30.7
|
1.0
|
|
OD1
|
A:ASP52
|
3.6
|
29.1
|
1.0
|
|
OE1
|
A:GLN8
|
4.0
|
33.4
|
1.0
|
|
NE2
|
A:HIS48
|
4.2
|
25.4
|
1.0
|
|
CG
|
A:HIS195
|
4.2
|
26.6
|
1.0
|
|
CG
|
A:HIS53
|
4.2
|
29.9
|
1.0
|
|
ND1
|
A:HIS195
|
4.3
|
26.2
|
1.0
|
|
CE1
|
A:HIS48
|
4.3
|
25.3
|
1.0
|
|
ND1
|
A:HIS53
|
4.3
|
30.4
|
1.0
|
|
CB
|
A:ASP144
|
4.4
|
26.9
|
1.0
|
|
CB
|
A:ASP52
|
4.6
|
29.9
|
1.0
|
|
NE2
|
A:HIS110
|
4.7
|
24.4
|
1.0
|
|
CD
|
A:GLN8
|
4.7
|
30.3
|
1.0
|
|
CG
|
A:GLN8
|
5.0
|
28.9
|
1.0
|
|
Zinc binding site 3 out
of 12 in 7e3v
Go back to
Zinc Binding Sites List in 7e3v
Zinc binding site 3 out
of 12 in the Metallo Beta-Lactamase Fold Protein (Camp Free)
 Mono view
 Stereo pair view
|
|
A full contact list of Zinc with other atoms in the Zn binding
site number 3 of Metallo Beta-Lactamase Fold Protein (Camp Free) within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Zn303
b:34.8
occ:0.50
|
NI
|
B:NI301
|
0.1
|
35.9
|
0.5
|
|
ND1
|
B:HIS50
|
2.1
|
28.6
|
1.0
|
|
NE2
|
B:HIS48
|
2.2
|
28.8
|
1.0
|
|
NE2
|
B:HIS110
|
2.2
|
26.7
|
1.0
|
|
OD2
|
B:ASP144
|
2.3
|
33.6
|
1.0
|
|
O
|
B:HOH431
|
2.3
|
50.7
|
1.0
|
|
CD2
|
B:HIS48
|
2.9
|
28.2
|
1.0
|
|
NI
|
B:NI302
|
3.0
|
50.9
|
0.5
|
|
CD2
|
B:HIS110
|
3.0
|
25.4
|
1.0
|
|
CE1
|
B:HIS50
|
3.1
|
30.5
|
1.0
|
|
ZN
|
B:ZN304
|
3.1
|
44.4
|
0.5
|
|
CG
|
B:HIS50
|
3.1
|
28.9
|
1.0
|
|
CE1
|
B:HIS110
|
3.3
|
24.1
|
1.0
|
|
CE1
|
B:HIS48
|
3.3
|
29.3
|
1.0
|
|
CG
|
B:ASP144
|
3.4
|
29.6
|
1.0
|
|
CB
|
B:HIS50
|
3.5
|
29.8
|
1.0
|
|
CB
|
B:ASP144
|
3.9
|
28.0
|
1.0
|
|
O
|
A:HOH443
|
3.9
|
25.4
|
1.0
|
|
NE2
|
B:HIS53
|
3.9
|
37.7
|
1.0
|
|
CD2
|
B:HIS53
|
4.0
|
36.8
|
1.0
|
|
CG
|
B:HIS48
|
4.2
|
29.5
|
1.0
|
|
NE2
|
B:HIS50
|
4.2
|
28.6
|
1.0
|
|
CG
|
B:HIS110
|
4.2
|
24.6
|
1.0
|
|
OD1
|
B:ASP52
|
4.2
|
40.8
|
1.0
|
|
CD2
|
B:HIS50
|
4.3
|
28.6
|
1.0
|
|
ND1
|
B:HIS48
|
4.3
|
30.3
|
1.0
|
|
ND1
|
B:HIS110
|
4.3
|
25.0
|
1.0
|
|
OD1
|
B:ASP144
|
4.4
|
29.7
|
1.0
|
|
O
|
B:SER111
|
4.7
|
26.8
|
1.0
|
|
OD2
|
B:ASP52
|
4.8
|
37.8
|
1.0
|
|
CA
|
B:HIS50
|
4.9
|
31.5
|
1.0
|
|
CE1
|
B:HIS53
|
4.9
|
38.6
|
1.0
|
|
CG
|
B:ASP52
|
4.9
|
39.3
|
1.0
|
|
Zinc binding site 4 out
of 12 in 7e3v
Go back to
Zinc Binding Sites List in 7e3v
Zinc binding site 4 out
of 12 in the Metallo Beta-Lactamase Fold Protein (Camp Free)
 Mono view
 Stereo pair view
|
|
A full contact list of Zinc with other atoms in the Zn binding
site number 4 of Metallo Beta-Lactamase Fold Protein (Camp Free) within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Zn304
b:44.4
occ:0.50
|
NI
|
B:NI302
|
0.2
|
50.9
|
0.5
|
|
OD2
|
B:ASP144
|
2.1
|
33.6
|
1.0
|
|
NE2
|
B:HIS53
|
2.2
|
37.7
|
1.0
|
|
NE2
|
B:HIS195
|
2.3
|
30.0
|
1.0
|
|
OD2
|
B:ASP52
|
2.4
|
37.8
|
1.0
|
|
O
|
B:HOH431
|
3.0
|
50.7
|
1.0
|
|
CG
|
B:ASP144
|
3.0
|
29.6
|
1.0
|
|
NI
|
B:NI301
|
3.0
|
35.9
|
0.5
|
|
CD2
|
B:HIS195
|
3.1
|
27.6
|
1.0
|
|
CD2
|
B:HIS53
|
3.1
|
36.8
|
1.0
|
|
ZN
|
B:ZN303
|
3.1
|
34.8
|
0.5
|
|
OD1
|
B:ASP144
|
3.2
|
29.7
|
1.0
|
|
CG
|
B:ASP52
|
3.2
|
39.3
|
1.0
|
|
CE1
|
B:HIS53
|
3.2
|
38.6
|
1.0
|
|
CE1
|
B:HIS195
|
3.4
|
29.4
|
1.0
|
|
OD1
|
B:ASP52
|
3.4
|
40.8
|
1.0
|
|
OE1
|
B:GLN8
|
3.9
|
38.1
|
1.0
|
|
NE2
|
B:HIS48
|
4.0
|
28.8
|
1.0
|
|
CE1
|
B:HIS48
|
4.2
|
29.3
|
1.0
|
|
CG
|
B:HIS195
|
4.3
|
28.8
|
1.0
|
|
CG
|
B:HIS53
|
4.3
|
36.5
|
1.0
|
|
ND1
|
B:HIS53
|
4.3
|
36.4
|
1.0
|
|
CB
|
B:ASP144
|
4.4
|
28.0
|
1.0
|
|
ND1
|
B:HIS195
|
4.4
|
28.4
|
1.0
|
|
NE2
|
B:HIS110
|
4.6
|
26.7
|
1.0
|
|
CB
|
B:ASP52
|
4.6
|
38.5
|
1.0
|
|
CD
|
B:GLN8
|
4.8
|
36.5
|
1.0
|
|
ND1
|
B:HIS50
|
4.9
|
28.6
|
1.0
|
|
Zinc binding site 5 out
of 12 in 7e3v
Go back to
Zinc Binding Sites List in 7e3v
Zinc binding site 5 out
of 12 in the Metallo Beta-Lactamase Fold Protein (Camp Free)
 Mono view
 Stereo pair view
|
|
A full contact list of Zinc with other atoms in the Zn binding
site number 5 of Metallo Beta-Lactamase Fold Protein (Camp Free) within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Zn303
b:34.7
occ:0.50
|
NI
|
C:NI301
|
0.1
|
35.5
|
0.5
|
|
NE2
|
C:HIS48
|
2.2
|
25.8
|
1.0
|
|
NE2
|
C:HIS110
|
2.2
|
27.9
|
1.0
|
|
ND1
|
C:HIS50
|
2.3
|
31.3
|
1.0
|
|
OD2
|
C:ASP144
|
2.5
|
34.8
|
1.0
|
|
CD2
|
C:HIS48
|
3.0
|
26.7
|
1.0
|
|
CD2
|
C:HIS110
|
3.0
|
29.9
|
1.0
|
|
NI
|
C:NI302
|
3.2
|
47.6
|
0.5
|
|
CG
|
C:HIS50
|
3.2
|
33.0
|
1.0
|
|
ZN
|
C:ZN304
|
3.2
|
44.4
|
0.5
|
|
CE1
|
C:HIS50
|
3.2
|
32.1
|
1.0
|
|
O
|
C:HOH438
|
3.3
|
40.0
|
1.0
|
|
CE1
|
C:HIS48
|
3.3
|
26.4
|
1.0
|
|
CE1
|
C:HIS110
|
3.3
|
28.6
|
1.0
|
|
CG
|
C:ASP144
|
3.4
|
31.5
|
1.0
|
|
CB
|
C:HIS50
|
3.5
|
31.5
|
1.0
|
|
CB
|
C:ASP144
|
3.8
|
30.9
|
1.0
|
|
NE2
|
C:HIS53
|
3.9
|
32.3
|
1.0
|
|
CD2
|
C:HIS53
|
4.0
|
34.7
|
1.0
|
|
CG
|
C:HIS48
|
4.2
|
26.5
|
1.0
|
|
CG
|
C:HIS110
|
4.3
|
28.8
|
1.0
|
|
ND1
|
C:HIS48
|
4.3
|
25.6
|
1.0
|
|
ND1
|
C:HIS110
|
4.4
|
28.9
|
1.0
|
|
NE2
|
C:HIS50
|
4.4
|
31.5
|
1.0
|
|
CD2
|
C:HIS50
|
4.4
|
31.6
|
1.0
|
|
OD1
|
C:ASP52
|
4.4
|
40.4
|
1.0
|
|
OD1
|
C:ASP144
|
4.4
|
32.4
|
1.0
|
|
O
|
C:SER111
|
4.7
|
26.8
|
1.0
|
|
OD2
|
C:ASP52
|
4.9
|
41.0
|
1.0
|
|
CA
|
C:HIS50
|
4.9
|
32.6
|
1.0
|
|
CE1
|
C:HIS53
|
4.9
|
33.2
|
1.0
|
|
Zinc binding site 6 out
of 12 in 7e3v
Go back to
Zinc Binding Sites List in 7e3v
Zinc binding site 6 out
of 12 in the Metallo Beta-Lactamase Fold Protein (Camp Free)
 Mono view
 Stereo pair view
|
|
A full contact list of Zinc with other atoms in the Zn binding
site number 6 of Metallo Beta-Lactamase Fold Protein (Camp Free) within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Zn304
b:44.4
occ:0.50
|
NI
|
C:NI302
|
0.1
|
47.6
|
0.5
|
|
NE2
|
C:HIS53
|
2.2
|
32.3
|
1.0
|
|
OD2
|
C:ASP144
|
2.2
|
34.8
|
1.0
|
|
NE2
|
C:HIS195
|
2.3
|
29.5
|
1.0
|
|
OD2
|
C:ASP52
|
2.4
|
41.0
|
1.0
|
|
O
|
C:HOH438
|
2.9
|
40.0
|
1.0
|
|
CD2
|
C:HIS53
|
3.0
|
34.7
|
1.0
|
|
CG
|
C:ASP144
|
3.1
|
31.5
|
1.0
|
|
CD2
|
C:HIS195
|
3.1
|
28.5
|
1.0
|
|
NI
|
C:NI301
|
3.2
|
35.5
|
0.5
|
|
CG
|
C:ASP52
|
3.2
|
41.8
|
1.0
|
|
ZN
|
C:ZN303
|
3.2
|
34.7
|
0.5
|
|
CE1
|
C:HIS53
|
3.3
|
33.2
|
1.0
|
|
OD1
|
C:ASP144
|
3.3
|
32.4
|
1.0
|
|
CE1
|
C:HIS195
|
3.4
|
29.9
|
1.0
|
|
OD1
|
C:ASP52
|
3.5
|
40.4
|
1.0
|
|
OE1
|
C:GLN8
|
3.9
|
37.4
|
1.0
|
|
NE2
|
C:HIS48
|
4.1
|
25.8
|
1.0
|
|
CG
|
C:HIS53
|
4.2
|
34.4
|
1.0
|
|
ND1
|
C:HIS53
|
4.3
|
32.8
|
1.0
|
|
CG
|
C:HIS195
|
4.3
|
30.0
|
1.0
|
|
CE1
|
C:HIS48
|
4.3
|
26.4
|
1.0
|
|
ND1
|
C:HIS195
|
4.4
|
31.1
|
1.0
|
|
CB
|
C:ASP144
|
4.5
|
30.9
|
1.0
|
|
CB
|
C:ASP52
|
4.6
|
40.5
|
1.0
|
|
CD
|
C:GLN8
|
4.7
|
34.8
|
1.0
|
|
NE2
|
C:HIS110
|
4.7
|
27.9
|
1.0
|
|
CG
|
C:GLN8
|
5.0
|
34.0
|
1.0
|
|
Zinc binding site 7 out
of 12 in 7e3v
Go back to
Zinc Binding Sites List in 7e3v
Zinc binding site 7 out
of 12 in the Metallo Beta-Lactamase Fold Protein (Camp Free)
 Mono view
 Stereo pair view
|
|
A full contact list of Zinc with other atoms in the Zn binding
site number 7 of Metallo Beta-Lactamase Fold Protein (Camp Free) within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Zn305
b:32.9
occ:0.50
|
NI
|
D:NI303
|
0.1
|
33.5
|
0.5
|
|
NE2
|
D:HIS48
|
2.1
|
21.7
|
1.0
|
|
NE2
|
D:HIS110
|
2.2
|
26.8
|
1.0
|
|
ND1
|
D:HIS50
|
2.2
|
27.5
|
1.0
|
|
OD2
|
D:ASP144
|
2.5
|
30.2
|
1.0
|
|
CD2
|
D:HIS48
|
2.9
|
25.6
|
1.0
|
|
CD2
|
D:HIS110
|
3.1
|
24.9
|
1.0
|
|
CE1
|
D:HIS50
|
3.1
|
27.0
|
1.0
|
|
NI
|
D:NI304
|
3.1
|
44.9
|
0.5
|
|
ZN
|
D:ZN306
|
3.2
|
42.8
|
0.5
|
|
CG
|
D:HIS50
|
3.2
|
28.5
|
1.0
|
|
CE1
|
D:HIS110
|
3.2
|
26.1
|
1.0
|
|
CE1
|
D:HIS48
|
3.2
|
23.2
|
1.0
|
|
CG
|
D:ASP144
|
3.4
|
27.8
|
1.0
|
|
CB
|
D:HIS50
|
3.4
|
29.1
|
1.0
|
|
O
|
D:HOH441
|
3.5
|
36.2
|
1.0
|
|
CB
|
D:ASP144
|
3.8
|
26.6
|
1.0
|
|
NE2
|
D:HIS53
|
4.0
|
31.7
|
1.0
|
|
O
|
F:HOH431
|
4.0
|
29.3
|
1.0
|
|
CD2
|
D:HIS53
|
4.1
|
31.9
|
1.0
|
|
CG
|
D:HIS48
|
4.1
|
25.6
|
1.0
|
|
CG
|
D:HIS110
|
4.2
|
23.9
|
1.0
|
|
ND1
|
D:HIS48
|
4.2
|
23.6
|
1.0
|
|
NE2
|
D:HIS50
|
4.3
|
27.2
|
1.0
|
|
ND1
|
D:HIS110
|
4.3
|
23.4
|
1.0
|
|
CD2
|
D:HIS50
|
4.3
|
27.6
|
1.0
|
|
OD1
|
D:ASP52
|
4.4
|
36.3
|
1.0
|
|
OD1
|
D:ASP144
|
4.5
|
27.0
|
1.0
|
|
O
|
D:SER111
|
4.8
|
24.0
|
1.0
|
|
OD2
|
D:ASP52
|
4.9
|
37.0
|
1.0
|
|
CA
|
D:HIS50
|
4.9
|
30.4
|
1.0
|
|
CE1
|
D:HIS53
|
4.9
|
31.4
|
1.0
|
|
Zinc binding site 8 out
of 12 in 7e3v
Go back to
Zinc Binding Sites List in 7e3v
Zinc binding site 8 out
of 12 in the Metallo Beta-Lactamase Fold Protein (Camp Free)
 Mono view
 Stereo pair view
|
|
A full contact list of Zinc with other atoms in the Zn binding
site number 8 of Metallo Beta-Lactamase Fold Protein (Camp Free) within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Zn306
b:42.8
occ:0.50
|
NI
|
D:NI304
|
0.1
|
44.9
|
0.5
|
|
NE2
|
D:HIS53
|
2.2
|
31.7
|
1.0
|
|
OD2
|
D:ASP144
|
2.2
|
30.2
|
1.0
|
|
NE2
|
D:HIS195
|
2.3
|
28.5
|
1.0
|
|
OD2
|
D:ASP52
|
2.4
|
37.0
|
1.0
|
|
O
|
D:HOH441
|
2.7
|
36.2
|
1.0
|
|
CD2
|
D:HIS53
|
3.0
|
31.9
|
1.0
|
|
NI
|
D:NI303
|
3.1
|
33.5
|
0.5
|
|
CG
|
D:ASP144
|
3.1
|
27.8
|
1.0
|
|
ZN
|
D:ZN305
|
3.2
|
32.9
|
0.5
|
|
CD2
|
D:HIS195
|
3.2
|
27.7
|
1.0
|
|
CG
|
D:ASP52
|
3.2
|
37.0
|
1.0
|
|
CE1
|
D:HIS53
|
3.3
|
31.4
|
1.0
|
|
OD1
|
D:ASP144
|
3.3
|
27.0
|
1.0
|
|
CE1
|
D:HIS195
|
3.4
|
28.7
|
1.0
|
|
OD1
|
D:ASP52
|
3.5
|
36.3
|
1.0
|
|
NE2
|
D:HIS48
|
4.0
|
21.7
|
1.0
|
|
OE1
|
D:GLN8
|
4.0
|
34.2
|
1.0
|
|
CE1
|
D:HIS48
|
4.2
|
23.2
|
1.0
|
|
CG
|
D:HIS53
|
4.2
|
32.0
|
1.0
|
|
ND1
|
D:HIS53
|
4.3
|
31.6
|
1.0
|
|
CG
|
D:HIS195
|
4.4
|
28.9
|
1.0
|
|
CB
|
D:ASP144
|
4.5
|
26.6
|
1.0
|
|
ND1
|
D:HIS195
|
4.5
|
28.8
|
1.0
|
|
CB
|
D:ASP52
|
4.6
|
36.7
|
1.0
|
|
NE2
|
D:HIS110
|
4.7
|
26.8
|
1.0
|
|
CD
|
D:GLN8
|
4.8
|
33.0
|
1.0
|
|
ND1
|
D:HIS50
|
5.0
|
27.5
|
1.0
|
|
Zinc binding site 9 out
of 12 in 7e3v
Go back to
Zinc Binding Sites List in 7e3v
Zinc binding site 9 out
of 12 in the Metallo Beta-Lactamase Fold Protein (Camp Free)
 Mono view
 Stereo pair view
|
|
A full contact list of Zinc with other atoms in the Zn binding
site number 9 of Metallo Beta-Lactamase Fold Protein (Camp Free) within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Zn303
b:33.6
occ:0.50
|
NI
|
E:NI301
|
0.1
|
34.1
|
0.5
|
|
NE2
|
E:HIS110
|
2.0
|
24.2
|
1.0
|
|
NE2
|
E:HIS48
|
2.2
|
21.8
|
1.0
|
|
ND1
|
E:HIS50
|
2.3
|
28.8
|
1.0
|
|
OD2
|
E:ASP144
|
2.5
|
30.4
|
1.0
|
|
CD2
|
E:HIS110
|
3.0
|
24.2
|
1.0
|
|
CE1
|
E:HIS110
|
3.1
|
25.9
|
1.0
|
|
CD2
|
E:HIS48
|
3.1
|
22.7
|
1.0
|
|
CE1
|
E:HIS48
|
3.1
|
24.2
|
1.0
|
|
NI
|
E:NI302
|
3.2
|
38.0
|
0.5
|
|
CG
|
E:HIS50
|
3.2
|
29.4
|
1.0
|
|
ZN
|
E:ZN304
|
3.3
|
36.8
|
0.5
|
|
CE1
|
E:HIS50
|
3.3
|
30.4
|
1.0
|
|
CG
|
E:ASP144
|
3.4
|
28.6
|
1.0
|
|
CB
|
E:HIS50
|
3.5
|
29.8
|
1.0
|
|
CB
|
E:ASP144
|
3.8
|
26.6
|
1.0
|
|
O
|
D:HOH438
|
3.9
|
31.7
|
1.0
|
|
CG
|
E:HIS110
|
4.1
|
24.1
|
1.0
|
|
NE2
|
E:HIS53
|
4.1
|
27.3
|
1.0
|
|
ND1
|
E:HIS110
|
4.1
|
25.3
|
1.0
|
|
CD2
|
E:HIS53
|
4.2
|
27.4
|
1.0
|
|
ND1
|
E:HIS48
|
4.2
|
23.3
|
1.0
|
|
CG
|
E:HIS48
|
4.3
|
23.0
|
1.0
|
|
CD2
|
E:HIS50
|
4.4
|
28.7
|
1.0
|
|
NE2
|
E:HIS50
|
4.4
|
28.8
|
1.0
|
|
OD1
|
E:ASP52
|
4.4
|
31.7
|
1.0
|
|
OD1
|
E:ASP144
|
4.5
|
29.5
|
1.0
|
|
O
|
E:SER111
|
4.7
|
23.6
|
1.0
|
|
OD2
|
E:ASP52
|
4.9
|
31.6
|
1.0
|
|
CA
|
E:HIS50
|
4.9
|
27.8
|
1.0
|
|
Zinc binding site 10 out
of 12 in 7e3v
Go back to
Zinc Binding Sites List in 7e3v
Zinc binding site 10 out
of 12 in the Metallo Beta-Lactamase Fold Protein (Camp Free)
 Mono view
 Stereo pair view
|
|
A full contact list of Zinc with other atoms in the Zn binding
site number 10 of Metallo Beta-Lactamase Fold Protein (Camp Free) within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Zn304
b:36.8
occ:0.50
|
NI
|
E:NI302
|
0.1
|
38.0
|
0.5
|
|
OD2
|
E:ASP144
|
2.1
|
30.4
|
1.0
|
|
NE2
|
E:HIS195
|
2.2
|
27.2
|
1.0
|
|
NE2
|
E:HIS53
|
2.3
|
27.3
|
1.0
|
|
OD2
|
E:ASP52
|
2.5
|
31.6
|
1.0
|
|
CD2
|
E:HIS195
|
3.0
|
25.3
|
1.0
|
|
CG
|
E:ASP144
|
3.0
|
28.6
|
1.0
|
|
CD2
|
E:HIS53
|
3.1
|
27.4
|
1.0
|
|
NI
|
E:NI301
|
3.2
|
34.1
|
0.5
|
|
CE1
|
E:HIS195
|
3.2
|
26.1
|
1.0
|
|
ZN
|
E:ZN303
|
3.3
|
33.6
|
0.5
|
|
OD1
|
E:ASP144
|
3.3
|
29.5
|
1.0
|
|
CG
|
E:ASP52
|
3.3
|
31.8
|
1.0
|
|
CE1
|
E:HIS53
|
3.3
|
27.4
|
1.0
|
|
OD1
|
E:ASP52
|
3.5
|
31.7
|
1.0
|
|
OE1
|
E:GLN8
|
4.0
|
33.7
|
1.0
|
|
CG
|
E:HIS195
|
4.2
|
26.0
|
1.0
|
|
ND1
|
E:HIS195
|
4.3
|
26.1
|
1.0
|
|
NE2
|
E:HIS48
|
4.3
|
21.8
|
1.0
|
|
CG
|
E:HIS53
|
4.3
|
27.3
|
1.0
|
|
CE1
|
E:HIS48
|
4.3
|
24.2
|
1.0
|
|
ND1
|
E:HIS53
|
4.4
|
26.3
|
1.0
|
|
CB
|
E:ASP144
|
4.4
|
26.6
|
1.0
|
|
CB
|
E:ASP52
|
4.6
|
31.4
|
1.0
|
|
NE2
|
E:HIS110
|
4.6
|
24.2
|
1.0
|
|
CD
|
E:GLN8
|
4.8
|
29.3
|
1.0
|
|
CE1
|
E:HIS110
|
5.0
|
25.9
|
1.0
|
|
Reference:
K.-Y.Lee,
D.-G.Kim,
B.-J.Lee.
Metallo Beta-Lactamase Fold Protein To Be Published.
Page generated: Tue Oct 29 19:33:05 2024
|
