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Zinc in PDB, part 409 (files: 16321-16360), PDB 6y5p-6yhr

Experimental structures of coordination spheres of Zinc (Zn) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Zinc atoms. PDB files: 16321-16360 (PDB 6y5p-6yhr).
  1. 6y5p (Zn: 4) - Ring-Dtc Domain of DELTEX1 Bound to Nad
  2. 6y6y (Zn: 1) - Pseudomonas Stutzeri Nitrous Oxide Reductase Mutant, H129A
    Other atoms: Ca (1); Na (2); Cu (4); Cl (2);
  3. 6y74 (Zn: 2) - X-Ray Crystal Structure of Human Carbonic Anhydrase IX Catalytic Domain.
    Other atoms: Cl (3);
  4. 6y75 (Zn: 4) - BIL2 Domain From T.Thermophila BUBL1 Locus (C1A-N143A)
  5. 6y77 (Zn: 2) - Pseudomonas Stutzeri Nitrous Oxide Reductase Mutant, H326A
    Other atoms: Cu (4); Na (2);
  6. 6y79 (Zn: 1) - Cryo-Em Structure of A Respiratory Complex I F89A Mutant
    Other atoms: Fe (28);
  7. 6y7e (Zn: 3) - Pseudomonas Stutzeri Nitrous Oxide Reductase Mutant, H494A
    Other atoms: Ca (1); Na (2); Cl (2); Cu (4);
  8. 6y8l (Zn: 7) - Mycobacterium Thermoresistibile GYRB21 in Complex with Novobiocin
  9. 6y8n (Zn: 6) - Mycobacterium Thermoresistibile GYRB21 in Complex with REDX03863
    Other atoms: F (2);
  10. 6ya1 (Zn: 5) - Zinc Metalloprotease Proa
    Other atoms: Ca (4);
  11. 6ya6 (Zn: 2) - Minimal Construct of CDC7-DBF4 Bound to XL413
    Other atoms: Cl (2);
  12. 6ya7 (Zn: 4) - CDC7-DBF4 Bound to An MCM2-S40 Derived Bivalent Substrate
  13. 6ya8 (Zn: 2) - CDC7-DBF4 Bound to Adp-BEF3
    Other atoms: F (3); Mg (2);
  14. 6ybs (Zn: 1) - Structure of A Human 48S Translational Initiation Complex - Head
    Other atoms: Mg (29);
  15. 6ybw (Zn: 1) - Structure of A Human 48S Translational Initiation Complex - 40S Body
    Other atoms: Mg (60);
  16. 6ydx (Zn: 2) - Insulin-Regulated Aminopeptidase Complexed with A Macrocyclic Peptidic Inhibitor
  17. 6ye1 (Zn: 4) - Human Ecto-5'-Nucleotidase (CD73) in Complex with the Ampcp Derivative A894 (Compound 2N in Publication) in the Closed Form (Crystal Form IV)
    Other atoms: Cl (2);
  18. 6ye2 (Zn: 4) - Human Ecto-5'-Nucleotidase (CD73) in Complex with the Ampcp Derivative A1202 (Compound 4A in Publication) in the Closed Form (Crystal Form IV)
    Other atoms: Cl (2); Ca (2);
  19. 6yen (Zn: 2) - Crystal Structure of Ampc From E. Coli with Taniborbactam (Vnrx-5133)
    Other atoms: Cl (3); Na (1);
  20. 6yes (Zn: 2) - Crystal Structure of Type I-D Crispr-Cas Nuclease CAS10D
  21. 6yfw (Zn: 1) - Tgt H333F Mutant Crystallised at pH 8.5
    Other atoms: Cl (1);
  22. 6yfx (Zn: 1) - Tgt Y330F Mutant Crystallised at pH 5.5
  23. 6ygk (Zn: 1) - Tgt Y330F Mutant Crystallised at pH 8.5
  24. 6ygl (Zn: 1) - Tgt W326F Mutant Labelled Mit 5F-Trp Crystallised at pH 5.5
    Other atoms: F (3); Cl (1);
  25. 6ygm (Zn: 1) - Tgt W95F Mutant Labelled Mit 5F-Trp Crystallised at pH 5.5
    Other atoms: F (3);
  26. 6ygo (Zn: 1) - Tgt W95F Mutant Labelled Mit 5F-Trp Crystallised at pH 8.5
    Other atoms: F (3);
  27. 6ygp (Zn: 1) - Tgt Wt Labelled Mit 5F-Trp Crystallised at pH 5.5
    Other atoms: F (4); Cl (1);
  28. 6ygr (Zn: 1) - Trna-Guanine Transglycosylase (Tgt) in Co-Crystallized Complex with 6- Amino-4-(2-Phenylethyl)-1,7-Dihydro-8H-Imidazo[4,5-G]Quinazolin-8-One
  29. 6ygs (Zn: 1) - Trna-Guanine Transglycosylase (Tgt) in Co-Crystallized Complex with 6- Amino-2-(Methylamino)-4-(4-(Trifluoromethyl)Phenethyl)-3,7-Dihydro- 8H-Imidazo[4,5-G]Quinazolin-8-One
    Other atoms: F (6);
  30. 6ygv (Zn: 1) - Trna-Guanine Transglycosylase (Tgt) in Co-Crystallized Complex with (E)-N-Ethyl-4-Oxo-4-Phenylbut-2-Enamide
  31. 6ygw (Zn: 1) - Tgt W178F Mutant Labelled Mit 5F-Trp Crystallised at pH 5.5
    Other atoms: F (3); Cl (1);
  32. 6ygx (Zn: 1) - Trna-Guanine Transglycosylase (Tgt) Labeled with 5-Fluorotryptophan in Co-Crystallized Complex with 6-Amino-2-(Methylamino)-4-(2-((2R,3R,4S, 5R,6S)-3,4,5,6-Tetramethoxytetrahydro-2H-Pyran-2-Yl)Ethyl)-1H- Imidazo[4,5-G]Quinazolin-8(7H)-One
    Other atoms: F (4);
  33. 6ygy (Zn: 1) - Trna-Guanine Transglycosylase (Tgt) Labeled with 5-Fluorotryptophan in Co-Crystallized Complex with 6-Amino-4-[2-(4-Methylphenyl)Ethyl]-1,7- Dihydro-8H-Imidazo[4,5-G]Quinazolin-8-One
    Other atoms: F (4);
  34. 6ygz (Zn: 1) - Trna Guanine Transglycosylase (Tgt) Labelled with 5-Fluoro-Tryptophan in Co-Crystallized Complex with 6-Amino-4-(2-Phenylethyl)-1,7- Dihydro-8H-Imidazo[4,5-G]Quinazolin-8-One
    Other atoms: F (4);
  35. 6yh1 (Zn: 1) - Trna-Guanine Transglycosylase (Tgt) Labeled with 5-Fluorotryptophan in Co-Crystallized Complex with 6-Amino-2-(Methylamino)-4-(4- (Trifluoromethyl)Phenethyl)-3,7-Dihydro-8H-Imidazo[4,5-G]Quinazolin- 8-One
    Other atoms: F (10);
  36. 6yh2 (Zn: 1) - Trna-Guanine Transglycosylase (Tgt) Labeled with 5-Fluorotryptophan in Co-Crystallized Complex with 2-(Methylamino)-1,7-Dihydro-8H- Imidazo[4,5-G]Quinazolin-8-One
    Other atoms: F (4); Cl (1);
  37. 6yh3 (Zn: 1) - Trna-Guanine Transglycosylase (Tgt) in Co-Crystallized Complex with 6- Amino-2-(Methylamino)-4-Phenethyl-1,7-Dihydro-8H-Imidazo[4,5- G]Quinazolin-8-One
    Other atoms: F (4);
  38. 6yhd (Zn: 1) - Trna-Guanine Transglycosylase (Tgt) Labeled with 5-Fluorotryptophan in Co-Crystallized Complex with 6-Amino-4-(2-((2R,3S,4R,5R)-3,4- Dihydroxy-5-Methoxytetrahydrofuran-2-Yl)Ethyl)-2-(Methylamino)-3,7- Dihydro-8H-Imidazo[4,5-G]Quinazolin-8-One
    Other atoms: F (4); Cl (1);
  39. 6yhe (Zn: 1) - Trna-Guanine Transglycosylase (Tgt) Labeled with 5-Fluorotryptophan in Co-Crystallized Complex with 6-Amino-4-(2-((3AR,4R,6R,6AR)-6-Methoxy- 2,2-Dimethyltetrahydrofuro[3,4-D][1,3]Dioxol-4-Yl)Ethyl)-2- (Methylamino)-1H-Imidazo[4,5-G]Quinazolin-8(7H)-One
    Other atoms: F (4);
  40. 6yhr (Zn: 2) - Crystal Structure of Werner Syndrome Helicase
Page generated: Wed Mar 3 16:14:05 2021

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