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Zinc in PDB 6ucp: Zinc Finger 2 From the Transcription Factor SP1 Dna Binding Domain

Zinc Binding Sites:

The binding sites of Zinc atom in the Zinc Finger 2 From the Transcription Factor SP1 Dna Binding Domain (pdb code 6ucp). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Zinc Finger 2 From the Transcription Factor SP1 Dna Binding Domain, PDB code: 6ucp:

Zinc binding site 1 out of 1 in 6ucp

Go back to Zinc Binding Sites List in 6ucp
Zinc binding site 1 out of 1 in the Zinc Finger 2 From the Transcription Factor SP1 Dna Binding Domain


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Zinc Finger 2 From the Transcription Factor SP1 Dna Binding Domain within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn101

b:0.3
occ:1.00
NE2 A:HIS23 2.0 0.2 1.0
NE2 A:HIS27 2.0 0.3 1.0
SG A:CYS10 2.3 0.3 1.0
SG A:CYS5 2.3 0.5 1.0
CE1 A:HIS27 3.0 0.3 1.0
CE1 A:HIS23 3.0 0.2 1.0
CD2 A:HIS23 3.0 0.2 1.0
CD2 A:HIS27 3.0 0.4 1.0
HB3 A:CYS10 3.1 0.3 1.0
HE1 A:HIS27 3.2 0.3 1.0
HE1 A:HIS23 3.2 0.2 1.0
HD2 A:HIS23 3.2 0.2 1.0
HD2 A:HIS27 3.3 0.4 1.0
CB A:CYS10 3.3 0.3 1.0
CB A:CYS5 3.3 0.4 1.0
HB2 A:CYS5 3.4 0.8 1.0
H A:LYS12 3.4 0.2 1.0
HB3 A:TRP7 3.4 0.2 1.0
HB3 A:CYS5 3.5 0.9 1.0
HB3 A:LYS12 3.6 0.2 1.0
HB2 A:CYS10 3.8 0.3 1.0
HB2 A:LYS12 3.8 0.2 1.0
HB2 A:TRP7 4.0 0.3 1.0
ND1 A:HIS23 4.1 0.1 1.0
ND1 A:HIS27 4.1 0.4 1.0
CG A:HIS23 4.1 0.1 1.0
CG A:HIS27 4.2 0.4 1.0
CB A:TRP7 4.2 0.3 1.0
CB A:LYS12 4.2 0.2 1.0
H A:GLY11 4.3 0.2 1.0
H A:TRP7 4.3 0.4 1.0
N A:LYS12 4.3 0.2 1.0
N A:GLY11 4.5 0.2 1.0
CA A:CYS10 4.6 0.2 1.0
HG21 A:THR26 4.7 1.6 1.0
C A:CYS10 4.7 0.2 1.0
CA A:CYS5 4.8 0.4 1.0
HE1 A:PHE14 4.8 0.2 1.0
HG22 A:THR26 4.8 1.4 1.0
CA A:LYS12 4.9 0.2 1.0
HG23 A:THR26 4.9 1.8 1.0
HD1 A:HIS27 5.0 0.4 1.0

Reference:

S.R.Rao, W.S.Horne. Proteomimetic Zinc Finger Domains with Modified Metal-Binding Beta-Turns Peptide Science 2020.
ISSN: ISSN 1344-7661
DOI: 10.1002/PEP2.24177
Page generated: Wed Dec 16 12:58:30 2020

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