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Zinc in PDB 6uco: Backbone-Modified Variant of Zinc Finger 2 From the Transcription Factor SP1 Dna Binding Domain: Btd in the Metal-Binding Turn

Zinc Binding Sites:

The binding sites of Zinc atom in the Backbone-Modified Variant of Zinc Finger 2 From the Transcription Factor SP1 Dna Binding Domain: Btd in the Metal-Binding Turn (pdb code 6uco). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Backbone-Modified Variant of Zinc Finger 2 From the Transcription Factor SP1 Dna Binding Domain: Btd in the Metal-Binding Turn, PDB code: 6uco:

Zinc binding site 1 out of 1 in 6uco

Go back to Zinc Binding Sites List in 6uco
Zinc binding site 1 out of 1 in the Backbone-Modified Variant of Zinc Finger 2 From the Transcription Factor SP1 Dna Binding Domain: Btd in the Metal-Binding Turn


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Backbone-Modified Variant of Zinc Finger 2 From the Transcription Factor SP1 Dna Binding Domain: Btd in the Metal-Binding Turn within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn101

b:0.1
occ:1.00
NE2 A:HIS23 2.0 0.1 1.0
NE2 A:HIS27 2.0 0.1 1.0
SG A:CYS10 2.3 0.1 1.0
SG A:CYS5 2.3 0.1 1.0
CE1 A:HIS23 3.0 0.1 1.0
CE1 A:HIS27 3.0 0.2 1.0
CD2 A:HIS23 3.0 0.1 1.0
CD2 A:HIS27 3.0 0.1 1.0
HE1 A:HIS23 3.2 0.2 1.0
HE1 A:HIS27 3.2 0.2 1.0
HD2 A:HIS23 3.2 0.1 1.0
HD2 A:HIS27 3.2 0.1 1.0
HB3 A:CYS5 3.3 0.1 1.0
CB A:CYS10 3.3 0.1 1.0
HB3 A:CYS10 3.3 0.1 1.0
CB A:CYS5 3.4 0.1 1.0
HB2 A:CYS10 3.5 0.2 1.0
HB3 A:TRP7 3.5 0.2 1.0
HB2 A:CYS5 3.6 0.2 1.0
ND1 A:HIS23 4.1 0.1 1.0
ND1 A:HIS27 4.1 0.2 1.0
CG A:HIS23 4.1 0.1 1.0
CG A:HIS27 4.1 0.2 1.0
HB2 A:LYS12 4.2 0.6 1.0
HB2 A:TRP7 4.3 0.2 1.0
HD2 A:LYS12 4.4 1.4 1.0
CB A:TRP7 4.4 0.2 1.0
H A:TRP7 4.6 0.3 1.0
HA A:LYS24 4.6 0.2 1.0
HG1 A:THR26 4.7 0.2 1.0
CA A:CYS5 4.7 0.1 1.0
CA A:CYS10 4.8 0.1 1.0
H A:LYS12 4.8 0.3 1.0
OG1 A:THR26 4.8 0.2 1.0
O A:CYS5 4.9 0.2 1.0
H A:GLY11 4.9 0.2 1.0
HE3 A:TRP7 4.9 0.3 1.0
HG3 A:LYS12 5.0 1.5 1.0

Reference:

S.R.Rao, W.S.Horne. Proteomimetic Zinc Finger Domains with Modified Metal-Binding Beta-Turns Peptide Science 2020.
ISSN: ISSN 1344-7661
DOI: 10.1002/PEP2.24177
Page generated: Wed Dec 16 12:58:28 2020

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