Zinc in PDB, part 520 (files: 20761-20800),
PDB 8pim-8q0f
Experimental structures of coordination spheres of Zinc (Zn) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Zinc atoms. PDB files: 20761-20800 (PDB 8pim-8q0f).
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8pim (Zn: 2) - Fully Recruited Rfah Bound to E. Coli Transcription Complex Paused at Ops Site (Not Complementary Scaffold)
Other atoms:
Mg (1);
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8pjn (Zn: 2) - Catalytic Module of Human Ctlh E3 Ligase Bound to Multiphosphorylated UBE2H~Ubiquitin
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8pk7 (Zn: 1) - Helical Reconstruction of Chikv NSP3 Helical Scaffolds
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8pkb (Zn: 1) - Staphylococcus Aureus Endonuclease IV with Bound Phosphate
Other atoms:
Fe (2);
Cl (2);
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8pki (Zn: 1) - Cryo-Em Structure of NR5A2-Nucleosome Complex Shl+5.5
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8pkp (Zn: 1) - Cryo-Em Structure of the Apo Anaphase-Promoting Complex/Cyclosome (Apc/C) at 3.2 Angstrom Resolution
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8pmq (Zn: 2) - Catalytic Module of Yeast Gid E3 Ligase Bound to Multiphosphorylated UBC8~Ubiquitin
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8pn3 (Zn: 3) - Crystal Structure of the HC7-GLU200ALA Mutant Complexed to A Tetraglycopeptide.
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8pn5 (Zn: 8) - Crystal Structure of the HC7-GLU200ALA Mutant Complexed to A Triglycopeptide
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8poa (Zn: 2) - Structure of Enterovirus A71 2A Protease
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8pp6 (Zn: 1) - Human Rybp-PRC1 Bound to H2AK118UB1 Nucleosome
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8pp7 (Zn: 8) - Human Rybp-PRC1 Bound to Mononucleosome
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8ppk (Zn: 3) - Bat-Hp-Cov NSP1 and EIF1 Bound to the Human 40S Small Ribosomal Subunit
Other atoms:
Mg (111);
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8ppt (Zn: 3) - Pyrococcus Abyssi Dna Polymerase D (Pold) in Its Editing Mode Bound to A Primer/Template Substrate Containing A Mismatch
Other atoms:
Mg (3);
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8ppu (Zn: 3) - Pyrococcus Abyssi Dna Polymerase D (Pold) in Its Editing Mode Bound to A Primer/Template Substrate Containing Three Consecutive Mismatches
Other atoms:
Mg (3);
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8ppv (Zn: 3) - Intermediate Conformer of Pyrococcus Abyssi Dna Polymerase D (Pold) Bound to A Primer/Template Substrate Containing Three Consecutive Mismatches
Other atoms:
Mg (3);
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8pql (Zn: 3) - K48-Linked Ubiquitin Chain Formation with A Cullin-Ring E3 Ligase and CDC34: NEDD8-CUL2-RBX1-Elob/C-FEM1C with Trapped UBE2R2-Donor Ub- Acceptor Ub-SIL1 Peptide
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8pr4 (Zn: 3) - Dynactin Pointed End Bound to JIP3
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8prb (Zn: 2) - The Structure of V13BAGEL6
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8prc (Zn: 3) - The Structure of V13BAGEL8
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8pre (Zn: 2) - The Structure of NVBAGEL2 in the Presence of Zn(II)
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8prf (Zn: 2) - The Structure of NVBAGEL5
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8psn (Zn: 3) - Tilapia Lake Virus Polymerase in Vrna Initiation State (Transcriptase Conformation)
Other atoms:
Mg (2);
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8pso (Zn: 1) - Tilapia Lake Virus Polymerase in Vrna Initiation State (Core Only)
Other atoms:
Mg (2);
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8psq (Zn: 1) - Tilapia Lake Virus Polymerase in Crna Pre-Initiation State Mode A (Core Only)
Other atoms:
Mg (1);
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8pss (Zn: 1) - Tilapia Lake Virus Polymerase in Crna Pre-Initiation State Mode B (Core-Endo Only)
Other atoms:
Mg (1);
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8psu (Zn: 1) - Tilapia Lake Virus Polymerase in Vrna Pre-Initiation State Mode A (Core Only)
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8psx (Zn: 3) - Tilapia Lake Virus Polymerase in Vrna Elongation State (Transcriptase Conformation)
Other atoms:
Mg (2);
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8psz (Zn: 3) - Tilapia Lake Virus Polymerase in Vrna Elongation State with Additional Mode B Promoter (Transcriptase Conformation)
Other atoms:
Mg (2);
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8pt2 (Zn: 3) - Tilapia Lake Virus Polymerase in Vrna Pre-Initiation State Mode B (Transcriptase Conformation)
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8pt6 (Zn: 3) - Tilapia Lake Virus Polymerase in Vrna Initiation State (Replicase Conformation)
Other atoms:
Mg (2);
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8pt7 (Zn: 1) - Tilapia Lake Virus Polymerase in Crna Pre-Initiation State Mode A (Core-Endo Only)
Other atoms:
Mg (1);
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8pth (Zn: 1) - Tilapia Lake Virus Polymerase in Vrna Pre-Initiation State Mode B (Open Core | Partial Replicase Conformation)
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8ptj (Zn: 1) - Tilapia Lake Virus Polymerase in Vrna Pre-Initiation State Mode B (Close Core | Partial Replicase Conformation)
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8pvc (Zn: 1) - Structure of Mouse Heavy-Chain Apoferritin Determined By Cryoem at 100 Kev
Other atoms:
Fe (1);
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8py3 (Zn: 1) - Crystal Structure of Human SIRT2 in Complex with A 1,2,4-Oxadiazole Based Inhibitor
Other atoms:
F (1);
Cl (1);
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8q01 (Zn: 1) - Neck of Phage 812 After Tail Contraction (C6)
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8q0a (Zn: 2) - Inward-Facing, Closed Proteoliposome Complex I at 3.1 A. Initially Purified in Ddm.
Other atoms:
Fe (28);
K (1);
Mg (1);
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8q0c (Zn: 1) - Human Carbonic Anhydrase II Containing 3-Fluorotyrosine
Other atoms:
Hg (1);
F (11);
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8q0f (Zn: 2) - Inward-Facing, OPEN2 Proteoliposome Complex I at 3.1 A. Initially Purified in Ddm.
Other atoms:
Mg (1);
Fe (28);
K (1);
Page generated: Wed Nov 13 13:40:26 2024
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