Zinc in PDB 8pre: The Structure of NVBAGEL2 in the Presence of Zn(II)

The structure of The Structure of NVBAGEL2 in the Presence of Zn(II), PDB code: 8pre was solved by L.Vandebroek, A.R.D.Voet, X.Y.Lee, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	38.93 / 3.10
Space group	I 4 2 2
Cell size a, b, c (Å), α, β, γ (°)	55.05, 55.05, 107.92, 90, 90, 90
R / Rfree (%)	22.9 / 28.8

The binding sites of Zinc atom in the The Structure of NVBAGEL2 in the Presence of Zn(II) (pdb code 8pre). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the The Structure of NVBAGEL2 in the Presence of Zn(II), PDB code: 8pre:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the The Structure of NVBAGEL2 in the Presence of Zn(II)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of The Structure of NVBAGEL2 in the Presence of Zn(II) within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn101 b:57.8 occ:0.50 CE1 A:HIS64 2.3 62.4 1.0 O A:HOH202 2.6 58.1 1.0 NE2 A:HIS64 2.8 65.4 1.0 ND1 A:HIS64 3.3 63.2 1.0 CD2 A:HIS64 4.0 67.9 1.0 CG A:HIS64 4.2 61.3 1.0 O A:ASN62 4.4 75.5 1.0

Zinc binding site 2 out of 2 in the The Structure of NVBAGEL2 in the Presence of Zn(II)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of The Structure of NVBAGEL2 in the Presence of Zn(II) within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn102 b:59.6 occ:0.50 NE2 A:HIS24 2.1 61.1 1.0 CD2 A:HIS24 2.8 55.6 1.0 O A:HOH201 2.8 56.9 1.0 OG A:SER44 3.3 67.1 1.0 CE1 A:HIS24 3.3 72.4 1.0 CG A:HIS24 4.1 62.1 1.0 O A:ASN22 4.1 76.2 1.0 ND1 A:HIS24 4.3 71.1 1.0 N A:SER44 4.4 67.1 1.0 CB A:SER44 4.5 64.3 1.0 CA A:SER44 4.8 62.6 1.0

L.Vandebroek, A.R.D.Voet, X.Y.Lee. The Structure of V13BAGEL2 To Be Published.