Zinc in PDB 8pkp: Cryo-Em Structure of the Apo Anaphase-Promoting Complex/Cyclosome (Apc/C) at 3.2 Angstrom Resolution

The binding sites of Zinc atom in the Cryo-Em Structure of the Apo Anaphase-Promoting Complex/Cyclosome (Apc/C) at 3.2 Angstrom Resolution (pdb code 8pkp). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Cryo-Em Structure of the Apo Anaphase-Promoting Complex/Cyclosome (Apc/C) at 3.2 Angstrom Resolution, PDB code: 8pkp:

Zinc binding site 1 out of 1 in the Cryo-Em Structure of the Apo Anaphase-Promoting Complex/Cyclosome (Apc/C) at 3.2 Angstrom Resolution


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Cryo-Em Structure of the Apo Anaphase-Promoting Complex/Cyclosome (Apc/C) at 3.2 Angstrom Resolution within 5.0Å range: probe atom residue distance (Å) B Occ N:Zn901 b:213.0 occ:1.00 SG N:CYS231 2.3 152.8 1.0 SG N:CYS233 2.3 132.2 1.0 SG N:CYS224 2.3 154.9 1.0 SG N:CYS221 2.3 163.0 1.0 CB N:CYS224 2.5 152.1 1.0 CB N:CYS221 3.3 160.5 1.0 N N:CYS224 3.5 153.4 1.0 CA N:CYS224 3.6 152.5 1.0 CB N:CYS231 3.6 148.9 1.0 CB N:CYS233 3.7 127.5 1.0 N N:CYS233 4.0 124.5 1.0 CA N:CYS231 4.0 148.1 1.0 N N:TRP232 4.1 128.3 1.0 C N:CYS224 4.5 153.5 1.0 CA N:CYS233 4.5 125.8 1.0 C N:CYS231 4.5 147.1 1.0 O N:CYS221 4.5 161.7 1.0 CA N:CYS221 4.6 160.4 1.0 C N:GLY223 4.7 142.6 1.0 C N:CYS221 4.8 161.4 1.0 O N:SER226 4.9 154.9 1.0 OE1 N:GLN186 5.0 118.8 1.0 C N:TRP232 5.0 123.9 1.0

A.Hoefler, J.Yu, L.Chang, Z.Zhang, J.Yang, A.Boland, D.Barford. High-Resolution Structure of the Anaphase-Promoting Complex (Apc/C) Bound to Co-Activator CDH1 To Be Published.