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Zinc in PDB, part 493 (files: 19681-19720), PDB 8ebv-8eua

Experimental structures of coordination spheres of Zinc (Zn) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Zinc atoms. PDB files: 19681-19720 (PDB 8ebv-8eua).
  1. 8ebv (Zn: 5) - Initial Dna-Lesion (Ap) Binding By Xpc and Tfiih Complex 1
    Other atoms: Ca (2); Fe (4);
  2. 8ebw (Zn: 5) - Initial Dna-Lesion (Ap) Binding By Xpc and Tfiih COMPLEX2
    Other atoms: Ca (2); Fe (4);
  3. 8ebx (Zn: 6) - Xpa Repositioning CORE7 of Tfiih Relative to Xpc-Dna Lesion (Ap)
    Other atoms: Fe (4); Ca (2);
  4. 8eby (Zn: 6) - Xpc Release From CORE7-Xpa-Dna (Ap)
    Other atoms: Fe (4);
  5. 8edj (Zn: 2) - Crystal Structure of RA3G-Ssrna-Ga
  6. 8eex (Zn: 4) - CAS7-11 in Complex with CSX29
  7. 8efg (Zn: 3) - Crystal Structure of Human TATDN1 Bound to Damp and Two Zinc Ions
    Other atoms: Na (1);
  8. 8eg7 (Zn: 2) - Cryo-Em Structure of Pre-Consensus Elemental Paused Elongation Complex
    Other atoms: Mg (1);
  9. 8eg8 (Zn: 2) - Cryo-Em Structure of Consensus Elemental Paused Elongation Complex with A Folded Tl
    Other atoms: Mg (1);
  10. 8egb (Zn: 2) - Cryo-Em Structure of Consensus Elemental Paused Elongation Complex with An Unfolded Tl
    Other atoms: Mg (1);
  11. 8eh8 (Zn: 2) - Cryo-Em Structure of His-Elemental Paused Elongation Complex with A Folded Tl and A Rotated Rh-Fl (1)
    Other atoms: Mg (1);
  12. 8eh9 (Zn: 2) - Cryo-Em Structure of His-Elemental Paused Elongation Complex with A Folded Tl and A Rotated Rh-Fl (2)
    Other atoms: Mg (1);
  13. 8eha (Zn: 2) - Cryo-Em Structure of His-Elemental Paused Elongation Complex with A Folded Tl and A Rotated Rh-Fl (Out)
    Other atoms: Mg (1);
  14. 8ehf (Zn: 2) - Cryo-Em Structure of His-Elemental Paused Elongation Complex with An Unfolded Tl (1)
    Other atoms: Mg (1);
  15. 8ehi (Zn: 2) - Cryo-Em Structure of His-Elemental Paused Elongation Complex with An Unfolded Tl (2)
    Other atoms: Mg (1);
  16. 8ehq (Zn: 2) - Mycobacterium Tuberculosis Paused Transcription Complex with Bacillus Subtilis Nusg
    Other atoms: Mg (1);
  17. 8ein (Zn: 4) - Crystal Structure of Wt Cyanophycin Dipeptide Hydrolase Cphz From Acinetobacter Baylyi DSM587
    Other atoms: Mn (4);
  18. 8eip (Zn: 4) - Crystal Structure of Cyanophycin Dipeptide Hydrolase Cphz E251A From Acinetobacter Baylyi DSM587 in Complex with Beta-Asp-Arg
    Other atoms: Mn (4);
  19. 8eiw (Zn: 2) - Cobalt(II)-Substituted Horse Liver Alcohol Dehydrogenase in Complex with Nadh and N-Cyclohexylformamide
    Other atoms: Co (2);
  20. 8eix (Zn: 2) - Cobalt(II)-Substituted S48A Horse Liver Alcohol Dehydrogenase in Complex with Nadh and N-Cyclohexylformamide
    Other atoms: Co (2);
  21. 8eiy (Zn: 2) - Cobalt(II)-Substituted S48T Horse Liver Alcohol Dehydrogenase in Complex with Nadh and N-Cyclohexylformamide
    Other atoms: Co (2);
  22. 8ej3 (Zn: 2) - M. Tuberculosis Rnap Pause Escaped Complex with Bacillus Subtilis Nusg and Gmpcpp
    Other atoms: Mg (2);
  23. 8el2 (Zn: 2) - Sars-Cov-2 Rbd Bound to Neutralizing Antibody Fab Ico-HU23
  24. 8ela (Zn: 2) - Ctx-M-14 Beta-Lactamase Mutant - N132A W Mes
    Other atoms: Cl (2);
  25. 8emq (Zn: 24) - Mouse Apoferritin Heavy Chain with Zinc Determined Using Single- Particle Cryo-Em with Apollo Camera.
    Other atoms: Fe (6);
  26. 8emu (Zn: 1) - Human Carbonic Anhydrase II Heterobifunctional Degraders
    Other atoms: Hg (1);
  27. 8eoe (Zn: 2) - Mycobacterium Tuberculosis Transcription Elongation Complex with Bacillus Subtilis Nusg (EC_LG)
    Other atoms: Mg (1);
  28. 8eof (Zn: 2) - Mycobacterium Tuberculosis Transcription Elongation Complex with Bacillus Subtilis Nusg (EC_PG)
    Other atoms: Mg (1);
  29. 8eos (Zn: 2) - M. Tuberculosis Rnap Elongation Complex with Nusg and Cmpcpp
    Other atoms: Mg (2);
  30. 8eot (Zn: 2) - M. Tuberculosis Rnap Elongation Complex with Nusg
    Other atoms: Mg (1);
  31. 8ept (Zn: 20) - UBE3A Isoform 2 Azul Domain
  32. 8epv (Zn: 3) - 2.2 A Crystal Structure of the Lipocalin Cat Allergen Fel D 7
  33. 8eqi (Zn: 2) - Crystal Structure of Danio Rerio Histone Deacetylase 6 Catalytic Domain 2 Complexed with Cyclopeptide DES4.2.0
    Other atoms: K (4);
  34. 8esv (Zn: 1) - Structure of Human ADAM10-TSPAN15 Complex Bound to 11G2 Vfab
    Other atoms: Ca (1);
  35. 8etb (Zn: 1) - The Crystal Structure of A Rationally Designed Zinc Sensor Based on Maltose Binding Protein - Zn Binding Conformation
  36. 8etc (Zn: 1) - FKBP39 Associated Nascent 60S Ribosome State 4
  37. 8etg (Zn: 1) - FKBP39 Associated 60S Nascent Ribosome State 3
  38. 8eti (Zn: 1) - FKBP39 Associated 60S Nascent Ribosome State 1
  39. 8etj (Zn: 1) - FKBP39 Associated 60S Nascent Ribosome State 2
  40. 8eua (Zn: 3) - Structure of Sars-COV2 Plpro Bound to A Covalent Inhibitor
Page generated: Fri Jul 28 12:58:23 2023

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