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Zinc in PDB 7zrx: F61V Cytochrome C Prime Beta From Methylococcus Capsulatus (Bath) Chemically Reduced Ferrous State

Protein crystallography data

The structure of F61V Cytochrome C Prime Beta From Methylococcus Capsulatus (Bath) Chemically Reduced Ferrous State, PDB code: 7zrx was solved by H.R.Adams, M.A.Hough, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.20 / 2.04
Space group P 21 3
Cell size a, b, c (Å), α, β, γ (°) 105.537, 105.537, 105.537, 90, 90, 90
R / Rfree (%) 18.4 / 21.5

Other elements in 7zrx:

The structure of F61V Cytochrome C Prime Beta From Methylococcus Capsulatus (Bath) Chemically Reduced Ferrous State also contains other interesting chemical elements:

Iron (Fe) 2 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the F61V Cytochrome C Prime Beta From Methylococcus Capsulatus (Bath) Chemically Reduced Ferrous State (pdb code 7zrx). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the F61V Cytochrome C Prime Beta From Methylococcus Capsulatus (Bath) Chemically Reduced Ferrous State, PDB code: 7zrx:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 7zrx

Go back to Zinc Binding Sites List in 7zrx
Zinc binding site 1 out of 2 in the F61V Cytochrome C Prime Beta From Methylococcus Capsulatus (Bath) Chemically Reduced Ferrous State


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of F61V Cytochrome C Prime Beta From Methylococcus Capsulatus (Bath) Chemically Reduced Ferrous State within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn201

b:39.9
occ:0.33
NE2 A:HIS71 2.1 38.3 1.0
O A:HOH337 2.2 51.5 1.0
CD2 A:HIS71 3.1 43.1 1.0
CE1 A:HIS71 3.1 49.7 1.0
ND1 A:HIS71 4.2 47.4 1.0
CG A:HIS71 4.2 50.5 1.0
OD1 A:ASN70 4.4 48.4 1.0

Zinc binding site 2 out of 2 in 7zrx

Go back to Zinc Binding Sites List in 7zrx
Zinc binding site 2 out of 2 in the F61V Cytochrome C Prime Beta From Methylococcus Capsulatus (Bath) Chemically Reduced Ferrous State


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of F61V Cytochrome C Prime Beta From Methylococcus Capsulatus (Bath) Chemically Reduced Ferrous State within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn204

b:128.3
occ:0.80
OE2 B:GLU68 2.1 79.4 1.0
ND1 B:HIS71 2.2 70.3 1.0
CE1 B:HIS71 3.1 72.9 1.0
CD B:GLU68 3.3 57.7 1.0
CG B:HIS71 3.3 70.5 1.0
CA B:HIS71 3.5 59.2 1.0
O B:HOH325 3.6 54.9 1.0
CB B:HIS71 3.7 63.0 1.0
OE1 A:GLN23 3.8 59.6 1.0
N B:HIS71 4.0 48.7 1.0
CG B:GLU68 4.1 58.1 1.0
OE1 B:GLU68 4.2 58.9 1.0
NE2 B:HIS71 4.3 62.5 1.0
CD2 B:HIS71 4.4 58.2 1.0
CD A:GLN23 4.6 57.4 1.0
C B:HIS71 4.6 51.3 1.0
O A:PRO24 4.6 37.2 1.0
CB A:GLN23 4.8 49.0 1.0
O B:HIS71 4.9 57.8 1.0

Reference:

H.R.Adams, R.W.Strange, D.A.Svistunenko, C.R.Andrew, M.A.Hough. F61V Cytochrome C Prime Beta From Methylococcus Capsulatus (Bath) To Be Published.
Page generated: Wed Oct 30 17:19:48 2024

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