Zinc in PDB 7zsv: F32V Cytochrome C Prime Beta From Methylococcus Capsulatus (Bath) Chemically Reduced Ferrous Form

Protein crystallography data

The structure of F32V Cytochrome C Prime Beta From Methylococcus Capsulatus (Bath) Chemically Reduced Ferrous Form, PDB code: 7zsv was solved by H.R.Adams, M.A.Hough, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 52.96 / 1.74
Space group P 21 3
Cell size a, b, c (Å), α, β, γ (°) 105.803, 105.803, 105.803, 90, 90, 90
R / Rfree (%) 18.2 / 20.9

Other elements in 7zsv:

The structure of F32V Cytochrome C Prime Beta From Methylococcus Capsulatus (Bath) Chemically Reduced Ferrous Form also contains other interesting chemical elements:

Iron (Fe) 2 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the F32V Cytochrome C Prime Beta From Methylococcus Capsulatus (Bath) Chemically Reduced Ferrous Form (pdb code 7zsv). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the F32V Cytochrome C Prime Beta From Methylococcus Capsulatus (Bath) Chemically Reduced Ferrous Form, PDB code: 7zsv:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 7zsv

Go back to Zinc Binding Sites List in 7zsv
Zinc binding site 1 out of 2 in the F32V Cytochrome C Prime Beta From Methylococcus Capsulatus (Bath) Chemically Reduced Ferrous Form


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of F32V Cytochrome C Prime Beta From Methylococcus Capsulatus (Bath) Chemically Reduced Ferrous Form within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn201

b:30.6
occ:0.33
NE2 A:HIS71 2.1 32.5 1.0
O A:HOH348 2.2 42.2 1.0
CE1 A:HIS71 3.0 42.0 1.0
CD2 A:HIS71 3.1 34.5 1.0
ND1 A:HIS71 4.1 41.0 1.0
CG A:HIS71 4.2 35.8 1.0
OD1 A:ASN70 4.4 38.5 1.0

Zinc binding site 2 out of 2 in 7zsv

Go back to Zinc Binding Sites List in 7zsv
Zinc binding site 2 out of 2 in the F32V Cytochrome C Prime Beta From Methylococcus Capsulatus (Bath) Chemically Reduced Ferrous Form


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of F32V Cytochrome C Prime Beta From Methylococcus Capsulatus (Bath) Chemically Reduced Ferrous Form within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn204

b:96.6
occ:0.80
OE2 B:GLU68 2.0 70.2 1.0
O B:HOH311 2.2 78.0 0.8
ND1 B:HIS71 2.5 64.8 1.0
CD B:GLU68 3.3 54.5 1.0
CE1 B:HIS71 3.3 63.5 1.0
O A:HOH301 3.6 50.6 1.0
CG B:HIS71 3.6 55.5 1.0
OE1 A:GLN23 3.6 47.9 1.0
CB B:HIS71 3.9 55.0 1.0
CA B:HIS71 4.0 48.6 1.0
OE1 B:GLU68 4.1 46.2 1.0
CG B:GLU68 4.3 47.4 1.0
O B:HOH305 4.3 49.7 1.0
CD A:GLN23 4.5 41.4 1.0
NE2 B:HIS71 4.5 60.5 1.0
CD2 B:HIS71 4.7 53.8 1.0
N B:HIS71 4.8 42.3 1.0

Reference:

H.R.Adams, R.W.Strange, D.A.Svistunenko, C.R.Andrew, M.A.Hough. F32V Cytochrome C Prime Beta From Methylococcus Capsulatus (Bath) To Be Published.
Page generated: Wed Oct 30 17:19:48 2024

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