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Zinc in PDB, part 425 (files: 16961-17000), PDB 6zw1-7a3v

Experimental structures of coordination spheres of Zinc (Zn) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Zinc atoms. PDB files: 16961-17000 (PDB 6zw1-7a3v).
  1. 6zw1 (Zn: 1) - X-Ray Structure of Danio Rerio Histone Deacetylase 6 (HDAC6) CD2 in Complex with An Inhibitor SW101
    Other atoms: K (2);
  2. 6zw3 (Zn: 7) - Racemic Compound of Rna Duplexes.
  3. 6zwm (Zn: 2) - Cryo-Em Structure of Human Mtor Complex 2, Overall Refinement
  4. 6zwo (Zn: 1) - Cryo-Em Structure of Human Mtor Complex 2, Focused on One Half
  5. 6zwu (Zn: 7) - Racemic Compound of Rna Duplexes.
  6. 6zx5 (Zn: 7) - Racemic Compound of Rna Duplexes.
  7. 6zx8 (Zn: 7) - Racemic Compound of Rna Duplexes.
  8. 6zx9 (Zn: 1) - Crystal Structure of Siv Vpr,Fused to T4 Lysozyme, Isolated From Moustached Monkey, Bound to Human DDB1 and Human DCAF1 (Amino Acid Residues 1046-1396)
  9. 6zxd (Zn: 2) - Cryo-Em Structure of A Late Human Pre-40S Ribosomal Subunit - State F1
  10. 6zxe (Zn: 2) - Cryo-Em Structure of A Late Human Pre-40S Ribosomal Subunit - State F2
  11. 6zxf (Zn: 3) - Cryo-Em Structure of A Late Human Pre-40S Ribosomal Subunit - State G
    Other atoms: Mg (2);
  12. 6zxg (Zn: 3) - Cryo-Em Structure of A Late Human Pre-40S Ribosomal Subunit - State H1
    Other atoms: Mg (131);
  13. 6zxh (Zn: 3) - Cryo-Em Structure of A Late Human Pre-40S Ribosomal Subunit - State H2
    Other atoms: Mg (131);
  14. 6zxw (Zn: 1) - Structure of Archaeoglobus Fulgidus TRM11-TRM112 M2G10 Trna Methyltransferase Complex Bound to Sinefungin
  15. 6zym (Zn: 7) - Human C Complex Spliceosome - High-Resolution Core
    Other atoms: Mg (5);
  16. 6zyn (Zn: 6) - Structure of Vim-2 with 2-Mercaptomethyl-Thiazolidine L-Anti-1B
  17. 6zyo (Zn: 6) - Structure of Vim-2 with 2-Mercaptomethyl-Thiazolidine D-Syn-1B
  18. 6zyp (Zn: 4) - Structure of Ndm-1 with 2-Mercaptomethyl-Thiazolidine L-Anti-1B
  19. 6zyq (Zn: 4) - Structure of Ndm-1 with 2-Mercaptomethyl-Thiazolidine D-Syn-1B
  20. 6zyr (Zn: 8) - Structure of Imp-1 with 2-Mercaptomethyl-Thiazolidine L-Anti-1B
    Other atoms: Na (1);
  21. 6zys (Zn: 8) - Structure of Imp-1 with 2-Mercaptomethyl-Thiazolidine D-Syn-1B
  22. 6zyu (Zn: 8) - Structure of the GLUA2 Ligand-Binding Domain (L483Y-N754S) in Complex with Glutamate and BPAM549
    Other atoms: Cl (5); F (6); As (1);
  23. 7a08 (Zn: 1) - Cryoem Structure of Cgas Nucleosome Complex
  24. 7a0b (Zn: 1) - Trna-Guanine Transglycosylase C158S/C281S/Y330C/H333A Mutant in Complex with Rac-Trans-3,4-Dihydroxysulfolane
  25. 7a0p (Zn: 1) - Neisseria Gonorrhoeae Leucyl-Trna Synthetase in Complex with Compound 11I
    Other atoms: Mg (1);
  26. 7a1g (Zn: 2) - Structure of A Crosslinked Yeast ABCE1-Bound 43S Pre-Initiation Complex
    Other atoms: Mg (80); Fe (8);
  27. 7a1j (Zn: 1) - Factor Inhibiting Hif-1 Alpha in Complex with Zn(II) and 3-(3- Phenylpropyl)-2-Oxoglutarate
  28. 7a1k (Zn: 1) - Factor Inhibiting Hif-1 Alpha in Complex with Zn(II) and 3-((9,9- Dimethyl-9H-Fluoren-2-Yl)Methyl)-2-Oxoglutarate
  29. 7a1l (Zn: 1) - Factor Inhibiting Hif-1 Alpha in Complex with Zn(II) and 3-Methyl-2- Oxoglutarate
  30. 7a1m (Zn: 1) - Factor Inhibiting Hif-1 Alpha in Complex with Zn(II) and 3-Propyl-2- Oxoglutarate
  31. 7a1n (Zn: 1) - Factor Inhibiting Hif-1 Alpha in Complex with Zn(II), 3-Methyl-2- Oxoglutarate, and Consensus Ankyrin Repeat Domain (20-Mer)
  32. 7a1o (Zn: 1) - Factor Inhibiting Hif-1 Alpha in Complex with Zn(II), 4-Ethyl-2- Oxoglutarate, and Consensus Ankyrin Repeat Domain (20-Mer)
  33. 7a1p (Zn: 1) - Factor Inhibiting Hif-1 Alpha in Complex with Zn(II), 4-Propyl-2- Oxoglutarate, and Consensus Ankyrin Repeat Domain (20-Mer)
  34. 7a1q (Zn: 1) - Factor Inhibiting Hif-1 Alpha in Complex with Zn(II), 3- (Carboxycarbonyl)Cyclopentane-1-Carboxylic Acid, and Consensus Ankyrin Repeat Domain (20-Mer)
  35. 7a1s (Zn: 1) - Factor Inhibiting Hif-1 Alpha in Complex with Zn(II), 3-Methyl-2- Oxoglutarate, and Tankyrase-2 (TNKS2) Fragment Peptide (21-Mer)
  36. 7a23 (Zn: 2) - Plant Mitochondrial Respiratory Complex I
    Other atoms: Fe (28);
  37. 7a24 (Zn: 2) - Assembly Intermediate of the Plant Mitochondrial Complex I
    Other atoms: Fe (28);
  38. 7a28 (Zn: 2) - Crystal Structure of T. Brucei Pde-B1 Catalytic Domain with Inhibitor Npd-617
    Other atoms: Mg (2);
  39. 7a2f (Zn: 2) - Crystal Structure of T. Brucei Pde-B1 Catalytic Domain with Inhibitor Npd-656
    Other atoms: Mg (2);
  40. 7a3v (Zn: 1) - Trna-Guanine Transglycosylase C158S/C281S/Y330C/H333A Mutant in Complex with 3-Hydroxysulfolane
Page generated: Thu Dec 28 12:37:55 2023

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