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Zinc in PDB, part 425 (files: 16961-17000), PDB 7kng-7lo4

Experimental structures of coordination spheres of Zinc (Zn) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Zinc atoms. PDB files: 16961-17000 (PDB 7kng-7lo4).
  1. 7kng (Zn: 4) - 2.10A Resolution Structure of Independent Phosphoglycerate Mutase From C. Elegans in Complex with A Macrocyclic Peptide Inhibitor (Ce-2 Y7F)
    Other atoms: Cl (4); Na (4);
  2. 7koa (Zn: 2) - Room Temperature Structure of Sars-Cov-2 NSP10/16 Methyltransferase in A Complex with Cap-0 and Sam Determined By Pink-Beam Serial Crystallography
  3. 7koj (Zn: 5) - The Crystal Structure of Papain-Like Protease of Sars Cov-2, C111S Mutant, in Complex with PLP_SNYDER494
    Other atoms: Cl (3);
  4. 7kok (Zn: 5) - The Crystal Structure of Papain-Like Protease of Sars Cov-2, C111S Mutant, in Complex with PLP_SNYDER496
    Other atoms: Cl (3);
  5. 7kol (Zn: 4) - The Crystal Structure of Papain-Like Protease of Sars Cov-2 in Complex with PLP_SNYDER496
    Other atoms: Cl (4);
  6. 7krx (Zn: 4) - The Crystal Structure of Papain-Like Protease of Sars Cov-2, C111S Mutant, in Complex with PLP_SNYDER441
    Other atoms: Cl (2);
  7. 7kso (Zn: 8) - Cryo-Em Structure of PRC2:EZH1-AEBP2-JARID2
  8. 7ksr (Zn: 7) - PRC2:EZH1_A From A Dimeric PRC2 Bound to A Nucleosome
  9. 7ktp (Zn: 7) - PRC2:EZH1_B From A Dimeric PRC2 Bound to A Nucleosome
  10. 7ku7 (Zn: 2) - Cryo-Em Structure of Rous Sarcoma Virus Cleaved Synaptic Complex (Csc) with Hiv-1 Integrase Strand Transfer Inhibitor Mk-2048. Cluster Identified By 3-Dimensional Variability Analysis in Cryosparc.
    Other atoms: F (2); Mg (4); Cl (2);
  11. 7kui (Zn: 2) - Cryo-Em Structure of Rous Sarcoma Virus Cleaved Synaptic Complex (Csc) with Hiv-1 Integrase Strand Transfer Inhibitor Mk-2048. Cic Region of A Cluster Identified By 3-Dimensional Variability Analysis in Cryosparc.
    Other atoms: F (2); Cl (2);
  12. 7kuq (Zn: 1) - Crystal Structure of Danio Rerio Histone Deacetylase 10 Y307F Mutant in Complex with N8-Acetylspermidine
    Other atoms: K (2); Na (1);
  13. 7kur (Zn: 1) - Crystal Structure of Danio Rerio Histone Deacetylase 10 Y307F Mutant in Complex with N-Acetylputrescine
    Other atoms: K (2); Na (1);
  14. 7kus (Zn: 1) - Crystal Structure of Danio Rerio Histone Deacetylase 10 H137A Mutant in Complex with N8-Acetylspermidine (Tetrahedral Intermediate)
    Other atoms: K (2);
  15. 7kut (Zn: 1) - Crystal Structure of Danio Rerio Histone Deacetylase 10 H137A Mutant in Complex with N-Acetylputrescine (Tetrahedral Intermediate)
    Other atoms: Na (1); K (2);
  16. 7kuv (Zn: 1) - Crystal Structure of Danio Rerio Histone Deacetylase 10 in Complex with Acetate
    Other atoms: K (2);
  17. 7kwd (Zn: 4) - Crystal Structure of Thermus Thermophilus Alkaline Phosphatase
    Other atoms: Mg (2);
  18. 7kwo (Zn: 1) - Rfviiifc-Vwf-Xten (BIVV001)
    Other atoms: Cu (1); Ca (2);
  19. 7ky2 (Zn: 2) - Botulism Neurooxin Light Chain A App Form
  20. 7kyf (Zn: 1) - Botulism Neurooxin Light Chain A App Form
    Other atoms: Cl (2);
  21. 7kyh (Zn: 4) - Botulism Neurooxin Light Chain A App Form
    Other atoms: Cl (8);
  22. 7kyj (Zn: 2) - Structure of A Gnat Superfamily PA3944 Acetyltransferase in Complex with Zinc
  23. 7kz7 (Zn: 1) - Crystals Structure of the Mutated Protease Domain of Botulinum Neurotoxin X (X4130B1).
  24. 7kzl (Zn: 6) - Cyclopentane Peptide Nucleic Acid in Complex with Dna
    Other atoms: I (1);
  25. 7kzz (Zn: 8) - Cryo-Em Structure of Yiip-Fab Complex in Holo State
  26. 7l0b (Zn: 8) - Crystal Structure of Hydroxyacyl Glutathione Hydrolase (Glob) From Staphylococcus Aureus, Apoenzyme
  27. 7l0n (Zn: 2) - Circulating Sars-Cov-2 Spike N439K Variants Maintain Fitness While Evading Antibody-Mediated Immunity
    Other atoms: Cl (27); Na (6);
  28. 7l3l (Zn: 14) - Structure of TRAF5 and TRAF6 Ring Hetero Dimer
  29. 7l3o (Zn: 4) - Crystal Structure of the Rna Binding Domain of Threonyl-Trna Synthetase From Cryptosporidium Parvum Iowa II
    Other atoms: Ca (2);
  30. 7l52 (Zn: 2) - Crystal Structure of the Metallo Beta Lactamase L1 From Stenotrophomonas Maltophilia Determined By Serial Crystallography
  31. 7l6r (Zn: 1) - Crystal Structure of Sars-Cov-2 NSP16/10 Heterodimer in Complex with (M7GPPPA2M)Pupupapapa (Cap-1), S-Adenosyl-L-Homocysteine (Sah) and Manganese (Mn).
    Other atoms: Cl (3); Mn (1);
  32. 7l6t (Zn: 2) - Crystal Structure of Sars-Cov-2 NSP16/10 Heterodimer in Complex with (M7GPPPA2M)Pupupapapa (Cap-1), S-Adenosyl-L-Homocysteine (Sah) and Two Magnesium (Mg) Ions.
    Other atoms: Cl (1); Mg (2);
  33. 7lbr (Zn: 2) - Sars-Cov-2 Papain-Like Protease (Plpro) Bound to Inhibitor XR8-89
  34. 7lbs (Zn: 2) - Sars-Cov-2 Papain-Like Protease (Plpro) Bound to Inhibitor XR8-24
  35. 7lgp (Zn: 2) - Dape Enzyme From Shigella Flexneri
    Other atoms: Na (3); Cl (15);
  36. 7llf (Zn: 2) - Sars-Cov-2 Papain-Like Protease (Plpro) Bound to Inhibitor XR8-83
  37. 7llz (Zn: 2) - Sars-Cov-2 Papain-Like Protease (Plpro) Bound to Inhibitor XR8-69
  38. 7lmk (Zn: 4) - Crystal Structure of Bovine DNMT1 BAH1 Domain in Complex with H4K20ME3
  39. 7lmm (Zn: 4) - Crystal Structure of Bovine DNMT1 BAH1 Domain in Complex with H4K20ME2
  40. 7lo4 (Zn: 1) - Sars-Cov-2 Spike Receptor-Binding Domain with A G485R Mutation in Complex with Human ACE2
Page generated: Sat Apr 17 17:48:38 2021

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