Zinc in PDB, part 502 (files: 20041-20080),
PDB 8daw-8dtu
Experimental structures of coordination spheres of Zinc (Zn) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Zinc atoms. PDB files: 20041-20080 (PDB 8daw-8dtu).
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8daw (Zn: 2) - Saccharomyces Cerevisiae UFD1/NPL4/CDC48 Complex Bound to Three Ubiquitin Moieties and One Unfolded Ubiquitin in Presence of Sumo- Ubiquitin(K48POLYUB)-Meos and Atp, State 2 (Ud)
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8db4 (Zn: 9) - Crystal Structure of the Peanut Allergen Ara H 2 Bound By Two Neutralizing Antibodies 22S1 and 13T1
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8dc4 (Zn: 4) - Crystal Structure of P53 Y220C Covalently Bound to Carbazole KG3
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8dc6 (Zn: 4) - Crystal Structure of P53 Y220C Covalently Bound to Indole KG6
Other atoms:
Mg (2);
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8dc7 (Zn: 1) - Crystal Structure of P53 Y220C Covalently Bound to Indole KG10
Other atoms:
Mg (2);
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8dc8 (Zn: 1) - Crystal Structure of P53 Y220C Covalently Bound to Azaindole KG13
Other atoms:
Mg (1);
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8dcd (Zn: 4) - Rna Ligase Rtcb From Pyrococcus Horikoshii in Complex with ZN2+ and Gtp
Other atoms:
Cl (2);
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8dd5 (Zn: 1) - Crystal Structure of KAT6A in Complex with Inhibitor Ctx-648 (Pf-9363)
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8dek (Zn: 2) - The Structure of the Glycopeptidase Catalytic Domain Including the Linker of AMUC_1438
Other atoms:
Na (1);
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8del (Zn: 1) - Trimeric Heme-Free Cytochrome Variant Apocyt-TRICYT3
Other atoms:
Mg (2);
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8dey (Zn: 6) - Ternary Complex Structure of Cereblon-DDB1 Bound to IKZF2(ZF2,3) and the Molecular Glue DKY709
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8df2 (Zn: 4) - The Structure of the 'Alt' Construct of the AMUC_1438 Glycopeptidase
Other atoms:
Na (12);
Ca (4);
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8df5 (Zn: 2) - Sars-Cov-2 Beta Rbd in Complex with Human ACE2 and S304 Fab and S309 Fab
Other atoms:
Cl (22);
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8dgd (Zn: 2) - Crystal Structure of Gaf Domain-Containing Protein, From Klebsiella Pneumoniae
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8dgs (Zn: 2) - Cryo-Em Structure of A Ras/Raf Complex (State 1)
Other atoms:
I (1);
F (1);
Mg (2);
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8dgt (Zn: 2) - Cryo-Em Structure of A Ras/Raf Complex (State 2)
Other atoms:
I (1);
F (1);
Mg (2);
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8dh6 (Zn: 1) - Cryo-Em Structure of Saccharomyces Cerevisiae Cytochrome C Oxidase (Complex IV) Extracted in Lipid Nanodiscs
Other atoms:
Fe (2);
Cu (2);
Ca (1);
Mg (1);
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8di4 (Zn: 2) - Discovery of Mk-8189, A Highly Potent and Selective PDE10A Inhibitor For the Treatment of Schizophrenia
Other atoms:
Mg (2);
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8dj9 (Zn: 1) - Carbonic Anhydrase II in Complex with Ibuprofen
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8djh (Zn: 4) - Ternary Complex of SUMO1 with A Phosphomimetic Sim of Pml and Zinc
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8dji (Zn: 3) - Ternary Complex of SUMO1 with the Sim of Pml and Zinc
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8dpc (Zn: 4) - Crystal Structure of Carbonic Anhydrase From Neisseria Gonorrhoeae
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8dpo (Zn: 4) - Crystal Structure of Neisseria Gonorrhoeae Carbonic Anhydrase with Acetazolamide
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8dpr (Zn: 1) - Crystal Structure of Sars-Cov-2 Main Protease in Complex with Inhibitor Tkb-248
Other atoms:
F (4);
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8dq9 (Zn: 2) - Crystal Structure of Gdp Bound 3-Dehydroquinate Dehydratase I From Klebsiella Oxytoca
Other atoms:
Cl (2);
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8dqb (Zn: 2) - Crystal Structure of 3-Dehydroquinate Dehydratase I From Klebsiella Oxytoca (I23 Form)
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8dqc (Zn: 2) - Crystal Structure of 3-Dehydroquinate Dehydratase I From Klebsiella Oxytoca (I222 Form)
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8dqf (Zn: 4) - Crystal Structure of Neisseria Gonorrhoeae Carbonic Anhydrase with N- (5-Sulfamoyl-1,3,4-Thiadiazol-2-Yl)Cyclohexanecarboxamide
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8dqn (Zn: 16) - Crystal Structure of Isoaspartyl Dipeptidase From Leucothrix Mucor DSM2157
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8dr2 (Zn: 4) - Crystal Structure of Neisseria Gonorrhoeae Carbonic Anhydrase with 2- Cyclohexyl-N-(5-Sulfamoyl-1,3,4-Thiadiazol-2-Yl)Acetamide
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8drb (Zn: 4) - Crystal Structure of Neisseria Gonorrhoeae Carbonic Anhydrase with 3- Phenyl-N-(5-Sulfamoyl-1,3,4-Thiadiazol-2-Yl)Propanamide
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8drf (Zn: 3) - Zn(II)-Bound B2 Dimer (H60/H100/H104)
Other atoms:
Fe (1);
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8drl (Zn: 3) - Zn(II)-Bound B2 Dimer (H60/H100/H104) Formed in Cu(II)//Zn(II) (M1 // M2) Condition
Other atoms:
Fe (1);
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8drm (Zn: 3) - Zn(II)-Bound B2 Dimer (H60/H100/H104) Formed in Zn(II)//Cu(II) (M1 // M2) Condition
Other atoms:
Fe (1);
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8drp (Zn: 4) - Focus/Local Refined Map in C4 of Signal Subtracted RYR1 Particles
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8dsf (Zn: 4) - Structure of CIAP1 with Bccov
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8dso (Zn: 1) - Structure of CIAP1, Btk and Bccov
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8dtd (Zn: 2) - Crystal Structure of Fosb From Bacillus Cereus with Zinc and Phosphonoformate
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8dtn (Zn: 4) - The Complex of Nanobody 6101 with BCL11A ZF6
Other atoms:
Mg (4);
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8dtu (Zn: 1) - The Complex of Nanobody 5344N74D with BCL11A ZF6.
Page generated: Tue Feb 25 12:10:03 2025
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