Zinc in PDB 8dh6: Cryo-Em Structure of Saccharomyces Cerevisiae Cytochrome C Oxidase (Complex IV) Extracted in Lipid Nanodiscs

Enzymatic activity of Cryo-Em Structure of Saccharomyces Cerevisiae Cytochrome C Oxidase (Complex IV) Extracted in Lipid Nanodiscs

Other elements in 8dh6:

Zinc Binding Sites:

Zinc binding site 1 out of 1 in 8dh6

Zinc Binding Sites List in 8dh6

Zinc binding site 1 out of 1 in the Cryo-Em Structure of Saccharomyces Cerevisiae Cytochrome C Oxidase (Complex IV) Extracted in Lipid Nanodiscs


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Cryo-Em Structure of Saccharomyces Cerevisiae Cytochrome C Oxidase (Complex IV) Extracted in Lipid Nanodiscs within 5.0Å range: probe atom residue distance (Å) B Occ d:Zn201 b:73.0 occ:1.00 NE2 d:HIS119 2.1 60.3 1.0 SG d:CYS134 2.3 61.2 1.0 SG d:CYS137 2.3 60.1 1.0 SG d:CYS111 2.3 61.5 1.0 CE1 d:HIS119 2.7 60.3 1.0 CB d:CYS134 3.0 61.2 1.0 CD2 d:HIS119 3.3 60.3 1.0 CB d:CYS137 3.4 60.1 1.0 N d:CYS137 3.9 60.1 1.0 CB d:CYS111 3.9 61.5 1.0 ND1 d:HIS119 3.9 60.3 1.0 O d:CYS111 4.2 61.5 1.0 CA d:CYS137 4.2 60.1 1.0 CG d:HIS119 4.2 60.3 1.0 C d:CYS111 4.3 61.5 1.0 N d:GLY113 4.3 62.5 1.0 CB d:MET122 4.4 60.4 1.0 CA d:CYS134 4.5 61.2 1.0 N d:THR112 4.6 61.9 1.0 C d:THR112 4.7 61.9 1.0 CA d:GLY113 4.7 62.5 1.0 OG d:SER139 4.7 60.2 1.0 CA d:CYS111 4.7 61.5 1.0 CB d:GLU136 4.9 61.2 1.0 C d:GLU136 4.9 61.2 1.0 CA d:THR112 4.9 61.9 1.0 CG d:MET122 4.9 60.4 1.0 C d:CYS137 4.9 60.1 1.0

Reference: