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Zinc in PDB, part 337 (files: 13441-13480), PDB 5wnv-5x42

Experimental structures of coordination spheres of Zinc (Zn) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Zinc atoms. PDB files: 13441-13480 (PDB 5wnv-5x42).
  1. 5wnv (Zn: 2) - Crystal Structure of 30S Ribosomal Subunit From Thermus Thermophilus
    Other atoms: Mg (251); K (22);
  2. 5wnw (Zn: 13) - Chaperone Spy Bound to IM7 6-45 Ensemble
    Other atoms: Cl (2);
  3. 5wo1 (Zn: 32) - Chaperone Spy H96L Bound to IM7 L18A L19A L37A (IM7 Un-Modeled)
    Other atoms: Cl (2);
  4. 5wo2 (Zn: 24) - Chaperone Spy Bound to Casein Fragment (Casein Un-Modeled)
    Other atoms: Cl (2);
  5. 5wo3 (Zn: 13) - Chaperone Spy Bound to IM7 (IM7 Un-Modeled)
    Other atoms: Cl (2);
  6. 5wob (Zn: 8) - Crystal Structure Analysis of FAB1-Bound Human Insulin Degrading Enzyme (Ide) in Complex with Insulin
  7. 5wpb (Zn: 3) - Crystal Structure of Fragment 3-(3-(Pyridin-2-Ylmethoxy)Quinoxalin-2- Yl)Propanoic Acid Bound in the Ubiquitin Binding Pocket of the HDAC6 Zinc-Finger Domain
  8. 5wpn (Zn: 12) - Zn-Bound Structure of Chaetopterus Variopedatus Ferritin
    Other atoms: Ca (1); Cl (1);
  9. 5wqa (Zn: 2) - Crystal Structure of PDE4D Catalytic Domain Complexed with Selaginpulvilins K
    Other atoms: Mg (2);
  10. 5wr2 (Zn: 1) - Thermolysin, Sfx Liganded Form with Oil-Based Carrier
    Other atoms: Ca (4);
  11. 5wr3 (Zn: 1) - Thermolysin, Sfx Liganded Form with Water-Based Carrier
    Other atoms: Ca (4);
  12. 5wr4 (Zn: 1) - Thermolysin, Sfx Unliganded Form with Oil-Based Carrier
    Other atoms: Ca (4);
  13. 5wr5 (Zn: 1) - Thermolysin, Liganded Form with Cryo Condition 1
    Other atoms: Ca (4);
  14. 5wr6 (Zn: 1) - Thermolysin, Liganded Form with Cryo Condition 2
    Other atoms: Ca (4);
  15. 5wri (Zn: 1) - Crystal Structure of Human Tyrosylprotein Sulfotransferase-1 Complexed with Pap and C4 Peptide
    Other atoms: Mg (2);
  16. 5ws2 (Zn: 4) - Crystal Structure of Mpy-Rnase J (Mutant S247A), An Archaeal Rnase J From Methanolobus Psychrophilus R15, Complex with Rna
  17. 5wsg (Zn: 6) - Cryo-Em Structure of the Catalytic Step II Spliceosome (C* Complex) at 4.0 Angstrom Resolution
    Other atoms: Mg (6);
  18. 5wuq (Zn: 2) - Crystal Structure of Sigw in Complex with Its Anti-Sigma Rsiw, A Zinc Binding Form
  19. 5wvo (Zn: 1) - Crystal Structure of DNMT1 Rfts Domain in Complex with K18/K23 Mono- Ubiquitylated Histone H3
  20. 5wvu (Zn: 3) - Crystal Structure of Carboxypeptidase From Thermus Thermophilus
  21. 5wwp (Zn: 6) - Crystal Structure of Middle East Respiratory Syndrome Coronavirus Helicase (Mers-Cov NSP13)
  22. 5wxg (Zn: 2) - Structure of Taf Phd Finger Domain Binds to H3(1-15)K4AC
    Other atoms: Mg (1);
  23. 5wxh (Zn: 4) - Crystal Structure of TAF3 Phd Finger Bound to H3K4ME3
  24. 5wy1 (Zn: 4) - Crystal Structure of Mouse Dna Methyltransferase 1 (T1505A Mutant)
  25. 5wy5 (Zn: 2) - Crystal Structure of MAGEG1 and NSE1 Complex
    Other atoms: Mg (2);
  26. 5wy8 (Zn: 3) - Crystal Structure of Ptp Delta IG1-IG3 in Complex with IL1RAPL1 IG1- IG3
  27. 5wz3 (Zn: 2) - Crystal Structure of Zika Virus NS5 Rna-Dependent Rna Polymerase(Rdrp)
  28. 5wzn (Zn: 2) - Alpha-N-Acetylgalactosaminidase Nagbb From Bifidobacterium Bifidum - Galnac Complex
    Other atoms: Ca (2);
  29. 5wzp (Zn: 2) - Alpha-N-Acetylgalactosaminidase Nagbb From Bifidobacterium Bifidum - Ligand Free
    Other atoms: Ca (2);
  30. 5wzq (Zn: 2) - Alpha-N-Acetylgalactosaminidase Nagbb From Bifidobacterium Bifidum - Quadruple Mutant
  31. 5wzr (Zn: 2) - Alpha-N-Acetylgalactosaminidase Nagbb From Bifidobacterium Bifidum - Gal-Nhac-Dnj Complex
    Other atoms: Ca (2);
  32. 5wzz (Zn: 8) - The Siah E3 Ubiquitin Ligases Promote Wnt/ Beta-Catenin Signaling Through Mediating Wnt-Induced Axin Degradation
  33. 5x16 (Zn: 1) - SIRT6 Apo Structure
  34. 5x19 (Zn: 2) - Co Bound Cytochrome C Oxidase at 100 Micro Sec After Pump Laser Irradiation to Release Co From O2 Reduction Center
    Other atoms: Mg (2); Fe (4); Cu (6); Na (2);
  35. 5x1b (Zn: 2) - Co Bound Cytochrome C Oxidase at 20 Nsec After Pump Laser Irradiation to Release Co From O2 Reduction Center
    Other atoms: Mg (2); Fe (4); Cu (6); Na (2);
  36. 5x1f (Zn: 2) - Co Bound Cytochrome C Oxidase Without Pump Laser Irradiation at 278K
    Other atoms: Mg (2); Fe (4); Cu (6); Na (2);
  37. 5x1h (Zn: 12) - Structure of Legionella Pneumophila Dotn
  38. 5x21 (Zn: 2) - Crystal Structure of Thermus Thermophilus Transcription Initiation Complex with Gpa and Pseudouridimycin (Pum)
    Other atoms: Mg (6);
  39. 5x22 (Zn: 4) - Crystal Structure of Thermus Thermophilus Transcription Initiation Complex with Gpa and Cmpcpp
    Other atoms: Mg (14);
  40. 5x42 (Zn: 2) - Structure of Dotl(590-659)-Dotn Derived From Legionella Pneumophila
Page generated: Thu Dec 28 12:31:00 2023

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