Zinc in PDB 5x16: SIRT6 Apo Structure

The structure of SIRT6 Apo Structure, PDB code: 5x16 was solved by J.Zhang, Z.Huang, K.Song, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	50.00 / 1.97
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	42.565, 68.138, 117.314, 90.00, 90.00, 90.00
R / Rfree (%)	18.4 / 23.2

The binding sites of Zinc atom in the SIRT6 Apo Structure (pdb code 5x16). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the SIRT6 Apo Structure, PDB code: 5x16:

Zinc binding site 1 out of 1 in the SIRT6 Apo Structure


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of SIRT6 Apo Structure within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn402 b:30.8 occ:1.00 SG A:CYS142 2.3 27.3 1.0 SG A:CYS164 2.3 29.4 1.0 SG A:CYS139 2.3 29.2 1.0 SG A:CYS175 2.4 29.9 1.0 CB A:CYS164 3.1 29.1 1.0 CB A:CYS139 3.2 28.5 1.0 CB A:CYS175 3.2 30.3 1.0 CB A:CYS142 3.3 28.8 1.0 N A:CYS142 3.8 31.4 1.0 CA A:CYS142 4.1 29.0 1.0 O A:HOH724 4.4 47.2 1.0 N A:GLY177 4.5 29.5 1.0 CA A:CYS164 4.6 29.7 1.0 CA A:CYS139 4.6 27.4 1.0 CA A:GLY177 4.6 29.2 1.0 CA A:CYS175 4.7 30.1 1.0 C A:CYS142 4.7 29.0 1.0 CB A:LYS141 4.8 37.4 1.0 C A:LYS141 4.9 34.5 1.0 N A:LYS143 4.9 29.8 1.0 CB A:THR144 4.9 28.4 1.0

J.Zhang, Z.Huang, K.Song. SIRT6 Apo Structure To Be Published.