Zinc in PDB, part 533 (files: 21281-21320),
PDB 8sjb-8sqk
Experimental structures of coordination spheres of Zinc (Zn) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Zinc atoms. PDB files: 21281-21320 (PDB 8sjb-8sqk).
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8sjb (Zn: 1) - Crystal Structure of ZN2+ Bound Calprotectin Variant H87C
Other atoms:
Ca (8);
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8sjc (Zn: 2) - Crystal Structure of ZN2+ Bound Calprotectin
Other atoms:
Ca (9);
Mg (2);
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8sjg (Zn: 2) - Zn-Bound Structure of Computationally Designed Homotrimer TET4
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8sjh (Zn: 1) - Zn-Bound Structure of Computationally Designed Homotrimer TP1
Other atoms:
Ca (3);
Cl (2);
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8sk2 (Zn: 2) - X-Ray Structure of the Ndm-4 Beta-Lactamase From Klebsiella Pneumonia, Apo Form
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8sko (Zn: 4) - X-Ray Structure of the Ndm-4 Beta-Lactamase From Klebsiella Pneumonia with L-Captopril Bound
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8skp (Zn: 2) - X-Ray Structure of the Ndm-4 Beta-Lactamase From Klebsiella Pneumonia in Complex with 1-Hydroxypyridine-2(1H)-Thione-6-Carboxylic Acid
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8skt (Zn: 2) - Structure of Ternary Complex of Mouse Cgas with Dsdna and Bound Atp with 5 Mm MN2+
Other atoms:
Mn (4);
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8sl1 (Zn: 1) - Cryo-Em Structure of Papp-A2
Other atoms:
Ca (2);
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8slf (Zn: 1) - Crystal Structure of Glycine Trna Ligase From Mycobacterium Thermoresistibile (Amp Bound)
Other atoms:
Mg (2);
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8slg (Zn: 2) - Crystal Structure of Glycine Trna Ligase From Mycobacterium Thermoresistibile (Glycyl Adenylate Bound)
Other atoms:
Mg (2);
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8slo (Zn: 1) - Plasmodium Falciparum M1 Aminopeptidase Bound to Selective Inhibitor MIPS2673
Other atoms:
Mg (5);
F (3);
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8slr (Zn: 1) - Crystal Structure of Mouse Trail
Other atoms:
Cl (3);
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8smw (Zn: 2) - Cryo-Em Structure of the Human Nucleosome Core Particle in Complex with RNF168 and UBCH5C~Ub (UBCH5C Chemically Conjugated to Histone H2A. No Density For Ub.) (Class 1)
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8smx (Zn: 2) - Cryo-Em Structure of the Human Nucleosome Core Particle in Complex with RNF168 and UBCH5C~Ub (UBCH5C Chemically Conjugated to Histone H2A. No Density For Ub.) (Class 2)
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8smy (Zn: 2) - Cryo-Em Structure of the Human Nucleosome Core Particle in Complex with RNF168 and UBCH5C~Ub (UBCH5C Chemically Conjugated to Histone H2A. No Density For Ub.) (Class 3)
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8smz (Zn: 2) - Cryo-Em Structure of the Human Nucleosome Core Particle in Complex with RNF168 and UBCH5C~Ub (UBCH5C Chemically Conjugated to Histone H2A. No Density For Ub.) (Class 4)
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8sn0 (Zn: 2) - Cryo-Em Structure of the Human Nucleosome Core Particle in Complex with RNF168 and UBCH5C~Ub (UBCH5C Chemically Conjugated to Histone H2A. No Density For Ub.) (Class 5)
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8sn1 (Zn: 2) - Cryo-Em Structure of the Human Nucleosome Core Particle in Complex with RNF168 and UBCH5C~Ub (UBCH5C Chemically Conjugated to Histone H2A. No Density For Ub.) (Class 6)
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8sn2 (Zn: 2) - Cryo-Em Structure of the Human Nucleosome Core Particle in Complex with RNF168 and UBCH5C (UBCH5C Chemically Conjugated to Histone H2A)
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8sn3 (Zn: 2) - Cryo-Em Structure of the Human Nucleosome Core Particle in Complex with RNF168 and UBCH5C~Ub (UBCH5C Chemically Conjugated to Histone H2A) (Class 1)
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8sn4 (Zn: 2) - Cryo-Em Structure of the Human Nucleosome Core Particle in Complex with RNF168 and UBCH5C~Ub (UBCH5C Chemically Conjugated to Histone H2A) (Class 2)
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8sn5 (Zn: 2) - Cryo-Em Structure of the Human Nucleosome Core Particle in Complex with RNF168 and UBCH5C~Ub (UBCH5C Chemically Conjugated to Histone H2A) (Class 3)
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8sn6 (Zn: 2) - Cryo-Em Structure of the Human Nucleosome Core Particle in Complex with RNF168 and UBCH5C~Ub (UBCH5C Chemically Conjugated to Histone H2A) (Class 4)
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8sn7 (Zn: 2) - Cryo-Em Structure of the Human Nucleosome Core Particle in Complex with RNF168 and UBCH5C~Ub (UBCH5C Chemically Conjugated to Histone H2A) (Class 5)
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8sn8 (Zn: 2) - Cryo-Em Structure of the Human Nucleosome Core Particle in Complex with RNF168 and UBCH5C~Ub (UBCH5C Chemically Conjugated to Histone H2A) (Class 6)
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8sn9 (Zn: 2) - Cryo-Em Structure of the Human Nucleosome Core Particle in Complex with RNF168 and UBCH5C with Backside Ubiquitin (UBCH5C Chemically Conjugated to Histone H2A) (Class 1)
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8sna (Zn: 2) - Cryo-Em Structure of the Human Nucleosome Core Particle in Complex with RNF168 and UBCH5C with Backside Ubiquitin (UBCH5C Chemically Conjugated to Histone H2A) (Class 2)
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8snk (Zn: 2) - Crystal Structure of Metformin Hydrolase (Mfmab) From Pseudomonas Mendocina Sp. Met-2 Mutant (Mfma/D188N)
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8snl (Zn: 1) - Structure of Human ADAM17/IRHOM2 Sheddase Complex
Other atoms:
Ca (1);
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8snm (Zn: 1) - Structure of Mature Human ADAM17/IRHOM2 Sheddase Complex in Complex with ADAM17 Prodomain
Other atoms:
Ca (1);
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8so0 (Zn: 1) - Cryo-Em Structure of the PP2A:B55-FAM122A Complex
Other atoms:
Fe (1);
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8soj (Zn: 2) - Cryo-Em Structure of Human Cst Bound to POT1(Esdl)/TPP1 in the Absence of Telomeric Ssdna
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8sok (Zn: 2) - Cryo-Em Structure of Human Cst Bound to POT1(Esdl)/TPP1 in the Presence of Telomeric Ssdna
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8spe (Zn: 9) - Crystal Structure of Bax Core Domain BH3-Groove Dimer - Tetrameric Fraction P31
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8sph (Zn: 2) - Crystal Structure of Chimeric Omicron Rbd (Strain Xbb.1) Complexed with Human ACE2
Other atoms:
Cl (2);
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8spi (Zn: 2) - Crystal Structure of Chimeric Omicron Rbd (Strain Xbb.1.5) Complexed with Human ACE2
Other atoms:
Cl (2);
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8sq9 (Zn: 2) - Sars-Cov-2 Replication-Transcription Complex Bound to NSP9 and Umpcpp, As A Pre-Catalytic Nmpylation Intermediate
Other atoms:
Mg (4);
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8sqj (Zn: 2) - Sars-Cov-2 Replication-Transcription Complex Bound to Rna-NSP9, As A Noncatalytic Rna-NSP9 Binding Mode
Other atoms:
Mg (1);
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8sqk (Zn: 2) - Sars-Cov-2 Replication-Transcription Complex Bound to Rna-NSP9 and Gdp-Betas, As A Pre-Catalytic Dernaylation/Mrna Capping Intermediate
Other atoms:
Mg (1);
Page generated: Sun Feb 9 11:46:54 2025
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