Zinc in PDB 8sj8: Structure of Binary Complex of Human Cgas and Bound Ppp(2'-5')Gpg

Enzymatic activity of Structure of Binary Complex of Human Cgas and Bound Ppp(2'-5')Gpg

All present enzymatic activity of Structure of Binary Complex of Human Cgas and Bound Ppp(2'-5')Gpg:
2.7.7.86;

Protein crystallography data

The structure of Structure of Binary Complex of Human Cgas and Bound Ppp(2'-5')Gpg, PDB code: 8sj8 was solved by S.Wu, J.Sohn, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 28.98 / 2.50
Space group P 21 2 21
Cell size a, b, c (Å), α, β, γ (°) 47.766, 59.584, 124.75, 90, 90, 90
R / Rfree (%) 21.4 / 27.1

Zinc Binding Sites:

The binding sites of Zinc atom in the Structure of Binary Complex of Human Cgas and Bound Ppp(2'-5')Gpg (pdb code 8sj8). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Structure of Binary Complex of Human Cgas and Bound Ppp(2'-5')Gpg, PDB code: 8sj8:

Zinc binding site 1 out of 1 in 8sj8

Go back to Zinc Binding Sites List in 8sj8
Zinc binding site 1 out of 1 in the Structure of Binary Complex of Human Cgas and Bound Ppp(2'-5')Gpg


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structure of Binary Complex of Human Cgas and Bound Ppp(2'-5')Gpg within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn601

b:24.4
occ:1.00
NE2 A:HIS390 2.0 25.1 1.0
SG A:CYS397 2.3 29.4 1.0
SG A:CYS396 2.3 28.5 1.0
SG A:CYS404 2.4 34.2 1.0
CD2 A:HIS390 2.9 28.0 1.0
CE1 A:HIS390 3.1 28.2 1.0
CB A:CYS397 3.4 25.3 1.0
CB A:CYS396 3.4 24.7 1.0
CB A:CYS404 3.4 26.7 1.0
N A:CYS397 3.6 28.7 1.0
C A:CYS396 3.8 30.1 1.0
N A:CYS404 3.8 31.4 1.0
CA A:CYS397 4.1 30.2 1.0
CA A:CYS396 4.1 28.1 1.0
CG A:HIS390 4.1 28.9 1.0
CA A:CYS404 4.1 31.4 1.0
ND1 A:HIS390 4.1 29.9 1.0
NH1 A:ARG406 4.2 26.3 1.0
O A:CYS396 4.3 30.2 1.0
O A:GLU402 4.5 34.4 1.0
C A:CYS404 4.6 33.4 1.0
O A:CYS404 4.7 32.4 1.0

Reference:

S.Wu, J.Sohn. Structure of Binary Complex of Human Cgas and Bound Ppp(2'-5')Gpg To Be Published.
Page generated: Thu Oct 31 11:00:48 2024

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