Zinc in PDB 8sjb: Crystal Structure of ZN2+ Bound Calprotectin Variant H87C

Protein crystallography data

The structure of Crystal Structure of ZN2+ Bound Calprotectin Variant H87C, PDB code: 8sjb was solved by Y.R.Perera, A.M.Rodriguez, V.Garcia, R.M.Guillen, W.J.Chazin, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 62.42 / 1.74
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 58.436, 76.935, 106.793, 90, 90, 90
R / Rfree (%) 18.4 / 19.7

Other elements in 8sjb:

The structure of Crystal Structure of ZN2+ Bound Calprotectin Variant H87C also contains other interesting chemical elements:

Calcium (Ca) 8 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of ZN2+ Bound Calprotectin Variant H87C (pdb code 8sjb). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of ZN2+ Bound Calprotectin Variant H87C, PDB code: 8sjb:

Zinc binding site 1 out of 1 in 8sjb

Go back to Zinc Binding Sites List in 8sjb
Zinc binding site 1 out of 1 in the Crystal Structure of ZN2+ Bound Calprotectin Variant H87C


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of ZN2+ Bound Calprotectin Variant H87C within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Zn201

b:37.1
occ:0.49
OD1 C:ASP27 1.9 45.2 1.0
NE2 C:HIS17 2.1 45.6 1.0
NE2 A:HIS83 2.2 45.2 1.0
SG A:CYS87 2.5 30.0 1.0
CG C:ASP27 2.7 39.8 1.0
OD2 C:ASP27 2.9 44.1 1.0
CE1 C:HIS17 3.0 46.9 1.0
CD2 A:HIS83 3.0 40.5 1.0
HE1 C:HIS17 3.1 51.2 1.0
HD2 A:HIS83 3.2 42.2 1.0
CD2 C:HIS17 3.2 37.7 1.0
CE1 A:HIS83 3.2 39.6 1.0
CB A:CYS87 3.3 30.0 1.0
HD2 C:HIS17 3.4 40.2 1.0
HE1 A:HIS83 3.5 41.2 1.0
HE2 C:PHE16 4.0 33.7 1.0
O C:HOH339 4.0 45.5 1.0
ND1 C:HIS17 4.1 45.5 1.0
CG A:HIS83 4.2 34.7 1.0
CB C:ASP27 4.2 36.3 1.0
ND1 A:HIS83 4.2 37.0 1.0
CG C:HIS17 4.3 43.6 1.0
HA C:ASP27 4.3 30.9 1.0
HB2 C:ASP27 4.4 38.8 1.0
HD2 C:PHE16 4.4 31.8 1.0
CE2 C:PHE16 4.7 33.0 1.0
CA A:CYS87 4.8 74.2 1.0
HB3 C:ASP27 4.8 38.8 1.0
CA C:ASP27 4.8 29.7 1.0
HB2 C:PHE73 4.8 32.0 1.0
HD1 C:HIS17 4.9 49.5 1.0
CD2 C:PHE16 4.9 31.4 1.0
HG23 C:ILE13 5.0 36.4 1.0
HD1 A:HIS83 5.0 38.0 1.0

Reference:

Y.R.Perera, A.R.Nassif, V.Garcia, R.M.Guillen, W.J.Chazin. Crystal Structure of ZN2+ Bound Calprotectin To Be Published.
Page generated: Thu Oct 31 11:01:25 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy