Zinc in PDB, part 430 (files: 17161-17200),
PDB 7b4g-7bkq
Experimental structures of coordination spheres of Zinc (Zn) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Zinc atoms. PDB files: 17161-17200 (PDB 7b4g-7bkq).
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7b4g (Zn: 1) - Structural Basis of Reactivation of Oncogenic P53 Mutants By A Small Molecule: Methylene Quinuclidinone (Mq). Human P53DBD-R282W Mutant Bound to Dna: R282W-Mq (II)
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7b4h (Zn: 1) - Structural Basis of Reactivation of Oncogenic P53 Mutants By A Small Molecule: Methylene Quinuclidinone (Mq). Human Wild-Type P53DBD Bound to Dna and Mq: Wt-Dna-Mq (III)
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7b4n (Zn: 1) - Structural Basis of Reactivation of Oncogenic P53 Mutants By A Small Molecule: Methylene Quinuclidinone (Mq). Human Wild-Type P53DBD Bound to Dna and Mq: Wt-Dna-Mq (II)
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7b5l (Zn: 9) - Ubiquitin Ligation to F-Box Protein Substrates By Scf-Rbr E3-E3 Super- Assembly: NEDD8-CUL1-RBX1-SKP1-SKP2-CKSHS1-Cyclin A-CDK2-P27- UBE2L3~Ub~ARIH1. Transition State 1
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7b5m (Zn: 5) - Ubiquitin Ligation to F-Box Protein Substrates By Scf-Rbr E3-E3 Super- Assembly: CUL1-RBX1-SKP1-SKP2-CKSHS1-P27~Ub~ARIH1. Transition State 2
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7b5n (Zn: 9) - Ubiquitin Ligation to F-Box Protein Substrates By Scf-Rbr E3-E3 Super- Assembly: NEDD8-CUL1-RBX1-UBE2L3~Ub~ARIH1.
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7b5s (Zn: 5) - Ubiquitin Ligation to F-Box Protein Substrates By Scf-Rbr E3-E3 Super- Assembly: CUL1-RBX1-ARIH1 Ariadne. Transition State 1
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7b7u (Zn: 6) - Cryo-Em Structure of Mammalian Rna Polymerase II in Complex with Human RPAP2
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7b83 (Zn: 1) - Structure of Sars-Cov-2 Main Protease Bound to Pyrithione Zinc
Other atoms:
Cl (1);
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7b8e (Zn: 1) - Torpedo Californica Acetylcholinesterase Complexed with Ca+2
Other atoms:
Ca (1);
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7b91 (Zn: 3) - Structure of A Minimal SF3B Core in Complex with Pladienolide D (Form I)
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7b92 (Zn: 3) - Structure of A Minimal SF3B Core in Complex with Sudemycin D6 (Form II)
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7b93 (Zn: 1) - Cryo-Em Structure of Mitochondrial Complex I From Mus Musculus Inhibited By Iacs-2858 at 3.0 A
Other atoms:
F (3);
Fe (28);
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7b9c (Zn: 3) - Structure of A Minimal SF3B Core in Complex with Spliceostatin A (Form I)
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7b9h (Zn: 2) - Crystal Structure of the PDE4D Catalytic Domain in Complex with Gebr- 42A
Other atoms:
Mg (8);
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7bad (Zn: 1) - Crystal Structure of Pafb in Complex with P-Sulfonato-Calix[8]Arene and Zinc
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7baf (Zn: 3) - Crystal Structure of Pafb in Complex with Zinc
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7bah (Zn: 2) - Structure of Rig-I Ctd Bound to Oh-Rna
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7bai (Zn: 5) - Structure of Rig-I Ctd (I875A) Bound to P-Rna
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7bb8 (Zn: 2) - Crystal Structure of Lugdulysin, A Staphylococcus Lugdunensis M30 Zinc Metallopeptidase
Other atoms:
As (1);
Ca (6);
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7bb9 (Zn: 1) - Crystal Structure of Lugdulysin E242Q Y315F Mutant
Other atoms:
Ca (3);
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7bbd (Zn: 2) - Crystal Structure of Monoubiquitinated TRIM21 Ring (Ub-Ring) in Complex with Ubiquitin Charged UBE2N (UBE2N~Ub) and UBE2V2
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7bbj (Zn: 4) - CD73 in Complex with the Humanized Antagonistic Antibody MAB19
Other atoms:
Mg (2);
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7bbu (Zn: 1) - Crystal Structure of Human Prolyl-Trna Synthetase in Complex with NCP26 and L-Proline
Other atoms:
Cl (1);
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7bez (Zn: 2) - Zinc Bound Domain 3 of Carbonic Anhydrase From Marine Diatom Thalassiosira Weissflogii
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7bf0 (Zn: 2) - Zn-Bound Domain 3 of CDCA1 in Complex with Carbon Dioxide
Other atoms:
Cl (1);
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7bfz (Zn: 2) - X-Ray Structure of Human Prostate-Specific Membrane Antigen(Psma) in Complex with A Inhibitor Glu-490
Other atoms:
Na (2);
Cl (1);
Ca (1);
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7bgm (Zn: 9) - Crystal Structure of MTHISN2, A Bifunctional Enzyme From the Histidine Biosynthetic Pathway
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7bgn (Zn: 18) - Crystal Structure of MTHISN2-Amp Complex, A Bifunctional Enzyme From the Histidine Biosynthetic Pathway
Other atoms:
Mg (1);
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7bh9 (Zn: 1) - Sars-Cov-2 Rbd-62 in Complex with ACE2 Peptidase Domain
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7bhh (Zn: 1) - 4-(2-(3-(4-Iodophenyl)Selenoureido)Ethyl)Benzenesulfonamide in Complex with Carbonic Anhydrase II
Other atoms:
I (1);
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7bi5 (Zn: 1) - Human Ca II in Complex with Benzyl Alcohol
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7bj1 (Zn: 3) - Crystal Structure of SMYD3 with Diperodon S Enantiomer Bound to Allosteric Site
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7bj8 (Zn: 2) - Structure of L1 with 2-Mercaptomethyl-Thiazolidine D-Syn-1B
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7bj9 (Zn: 2) - Structure of Sfh-I with 2-Mercaptomethyl-Thiazolidine L-Anti-1A
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7bjk (Zn: 5) - Crystal Structure of the Chloroplastic Fe Superoxide Dismutase PAP9 From Arabidopsis Thaliana.
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7bkb (Zn: 4) - Formate Dehydrogenase - Heterodisulfide Reductase - Formylmethanofuran Dehydrogenase Complex From Methanospirillum Hungatei (Hexameric, Composite Structure)
Other atoms:
Fe (212);
Mo (2);
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7bkc (Zn: 4) - Formate Dehydrogenase - Heterodisulfide Reductase - Formylmethanofuran Dehydrogenase Complex From Methanospirillum Hungatei (Dimeric, Composite Structure)
Other atoms:
Fe (212);
Mo (2);
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7bkp (Zn: 1) - Cryoem Structure of Disease Related M854K MDA5-Dsrna Filament in Complex with Atp
Other atoms:
Mg (1);
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7bkq (Zn: 1) - Cryoem Structure of MDA5-Dsrna Filament in Complex with Adp with 92- Degree Helical Twist
Page generated: Thu Dec 28 12:38:18 2023
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