Zinc in PDB 7bly: Structure of the Chitin Deacetylase Angcda From Aspergillus Niger

Enzymatic activity of Structure of the Chitin Deacetylase Angcda From Aspergillus Niger

All present enzymatic activity of Structure of the Chitin Deacetylase Angcda From Aspergillus Niger:
3.5.1.41;

Protein crystallography data

The structure of Structure of the Chitin Deacetylase Angcda From Aspergillus Niger, PDB code: 7bly was solved by T.Roret, M.Bonin, L.Hembach, B.M.Moerschbacher, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 42.38 / 1.81
Space group P 4 3 2
Cell size a, b, c (Å), α, β, γ (°) 119.874, 119.874, 119.874, 90, 90, 90
R / Rfree (%) 15.3 / 18.6

Other elements in 7bly:

The structure of Structure of the Chitin Deacetylase Angcda From Aspergillus Niger also contains other interesting chemical elements:

Chlorine (Cl) 1 atom

Zinc Binding Sites:

The binding sites of Zinc atom in the Structure of the Chitin Deacetylase Angcda From Aspergillus Niger (pdb code 7bly). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Structure of the Chitin Deacetylase Angcda From Aspergillus Niger, PDB code: 7bly:

Zinc binding site 1 out of 1 in 7bly

Go back to Zinc Binding Sites List in 7bly
Zinc binding site 1 out of 1 in the Structure of the Chitin Deacetylase Angcda From Aspergillus Niger


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structure of the Chitin Deacetylase Angcda From Aspergillus Niger within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn301

b:19.6
occ:1.00
 NE2 A:HIS101 2.2 20.0 1.0
O6 A:MLI302 2.2 19.5 1.0
OD1 A:ASP48 2.2 17.1 1.0
O A:HOH436 2.2 25.2 1.0
O7 A:MLI302 2.2 23.6 1.0
NE2 A:HIS97 2.2 17.9 1.0
C2 A:MLI302 2.5 30.4 1.0
CD2 A:HIS101 3.0 21.0 1.0
CD2 A:HIS97 3.1 17.7 1.0
CG A:ASP48 3.1 21.8 1.0
CE1 A:HIS101 3.2 32.9 1.0
CE1 A:HIS97 3.3 19.6 1.0
OD2 A:ASP48 3.3 22.0 1.0
C1 A:MLI302 4.1 24.3 1.0
OD2 A:ASP47 4.1 25.6 1.0
CB A:ASP47 4.1 17.6 1.0
CG A:HIS101 4.2 22.8 1.0
CG A:HIS97 4.3 16.7 1.0
ND1 A:HIS101 4.3 43.0 1.0
NE2 A:HIS195 4.3 22.7 1.0
ND1 A:HIS97 4.3 15.0 1.0
CD2 A:HIS195 4.5 21.4 1.0
O8 A:MLI302 4.5 31.9 1.0
CB A:ASP48 4.5 18.9 1.0
CG A:ASP47 4.6 21.7 1.0
O A:HOH423 4.6 39.5 1.0
CA A:PRO137 4.7 18.2 1.0
C3 A:MLI302 4.7 38.7 1.0
N A:ASP48 4.8 15.6 1.0
N A:TYR138 4.9 15.6 1.0
CA A:ASP48 4.9 18.2 1.0

Reference:

M.Bonin, L.Hameleers, L.Hembach, T.Roret, S.Cord-Landwehr, G.Michel, B.M.Moerschbacher. In Depths Analysis of An Aspergillus Niger Chitin Deacetylase Using in Silico and in Vitro Methods to Decipher Its Subsite Preferences To Be Published.
Page generated: Fri Sep 24 17:04:15 2021

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