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Zinc in PDB 7boh: Complete Bacterial 30S Ribosomal Subunit Assembly Complex State E (+Rbfa)(Consensus Refinement)

Other elements in 7boh:

The structure of Complete Bacterial 30S Ribosomal Subunit Assembly Complex State E (+Rbfa)(Consensus Refinement) also contains other interesting chemical elements:

Magnesium (Mg) 156 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the Complete Bacterial 30S Ribosomal Subunit Assembly Complex State E (+Rbfa)(Consensus Refinement) (pdb code 7boh). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Complete Bacterial 30S Ribosomal Subunit Assembly Complex State E (+Rbfa)(Consensus Refinement), PDB code: 7boh:

Zinc binding site 1 out of 1 in 7boh

Go back to Zinc Binding Sites List in 7boh
Zinc binding site 1 out of 1 in the Complete Bacterial 30S Ribosomal Subunit Assembly Complex State E (+Rbfa)(Consensus Refinement)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Complete Bacterial 30S Ribosomal Subunit Assembly Complex State E (+Rbfa)(Consensus Refinement) within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn301

b:140.6
occ:1.00
NE2 B:HIS18 2.1 117.0 1.0
OD1 B:ASP204 2.2 101.4 1.0
OD2 B:ASP204 2.4 92.2 1.0
CG B:ASP204 2.6 97.0 1.0
OD2 B:ASP188 2.7 94.9 1.0
CB B:ASP188 3.1 92.1 1.0
CE1 B:HIS18 3.1 116.5 1.0
CD2 B:HIS18 3.1 116.4 1.0
CG B:ASP188 3.3 94.1 1.0
OD1 B:ASN190 3.6 114.2 1.0
OD1 B:ASP205 3.6 102.8 1.0
OD1 B:ASP165 3.8 94.6 1.0
OD2 B:ASP205 4.1 103.8 1.0
CG B:ASP165 4.1 93.5 1.0
CB B:ASP204 4.1 94.1 1.0
CG B:ASP205 4.2 100.7 1.0
ND1 B:HIS18 4.2 116.3 1.0
CG B:HIS18 4.2 115.9 1.0
OD2 B:ASP165 4.3 92.6 1.0
CG B:ASN190 4.3 114.4 1.0
OD1 B:ASP188 4.5 94.0 1.0
ND2 B:ASN190 4.5 114.5 1.0
CA B:ASP188 4.6 92.8 1.0
N B:ASP204 4.7 101.4 1.0
CA B:ASP204 4.9 95.0 1.0
CB B:ASP165 4.9 98.0 1.0

Reference:

A.Schedlbauer, I.Iturrioz, B.Ochoa-Lizarralde, T.Diercks, J.P.Lopez-Alonso, J.L.Lavin, T.Kaminishi, R.Capuni, N.Dhimole, E.De Astigarraga, D.Gil-Carton, P.Fucini, S.R.Connell. A Conserved Rrna Switch Is Central to Decoding Site Maturation on the Small Ribosomal Subunit. Sci Adv V. 7 2021.
ISSN: ESSN 2375-2548
PubMed: 34088665
DOI: 10.1126/SCIADV.ABF7547
Page generated: Fri Dec 17 11:48:26 2021

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