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Zinc in PDB, part 343 (files: 13681-13720), PDB 6byu-6cao

Experimental structures of coordination spheres of Zinc (Zn) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Zinc atoms. PDB files: 13681-13720 (PDB 6byu-6cao).
  1. 6byu (Zn: 4) - X-Ray Crystal Structure of Escherichia Coli Rna Polymerase (Rpob- H526Y) and Ppapp Complex
    Other atoms: Mg (2);
  2. 6bzo (Zn: 2) - Mtb Rnap Holo/Rbpa/Fidaxomicin/Upstream Fork Dna
    Other atoms: Mg (1); Cl (2);
  3. 6c01 (Zn: 4) - Human Ectonucleotide Pyrophosphatase / Phosphodiesterase 3 (ENPP3, NPP3, CD203C)
    Other atoms: Ca (2); Na (2);
  4. 6c02 (Zn: 4) - Human Ectonucleotide Pyrophosphatase / Phosphodiesterase 3 (ENPP3, NPP3, CD203C), Inactive (T205A), N594S, with Alpha,Beta-Methylene-Atp (Ampcpp)
    Other atoms: Ca (2); Cl (3); Na (2);
  5. 6c04 (Zn: 2) - Mtb Rnap Holo/Rbpa/Double Fork Dna -Closed Clamp
    Other atoms: Mg (1);
  6. 6c05 (Zn: 2) - Mycobacterium Tuberculosis Rnap Holo/Rbpa in Relaxed State
    Other atoms: Mg (1);
  7. 6c06 (Zn: 2) - Mycobacterium Tuberculosis Rnap Holo/Rbpa/Fidaxomicin
    Other atoms: Mg (1); Cl (2);
  8. 6c0d (Zn: 1) - Crystal Structure of An Amidase (Hydantoinase/Carbamoylase Family) From Burkholderia Phymatum
  9. 6c0f (Zn: 3) - Yeast Nucleolar Pre-60S Ribosomal Subunit (State 2)
  10. 6c2c (Zn: 4) - The Molecular Basis For the Functional Evolution of An Organophosphate Hydrolysing Enzyme
    Other atoms: Mg (2);
  11. 6c2m (Zn: 4) - Crystal Structure of Hcv NS3/4A Protease Variant Y56H in Complex with Mk-5172
  12. 6c2n (Zn: 1) - Crystal Structure of Hcv NS3/4A Double Mutant Variant Y56H/D168A in Complex with Danoprevir
    Other atoms: F (1);
  13. 6c2o (Zn: 1) - Crystal Structure of Hcv NS3/4A Protease Variant Y56H in Complex with Danoprevir
    Other atoms: F (2);
  14. 6c39 (Zn: 5) - Apo Crystal Structure of Wild-Type S. Aureus Penicillin Binding Protein 4 (PBP4)
    Other atoms: Na (2);
  15. 6c3k (Zn: 5) - Apo Crystal Structure of S. Aureus Penicillin Binding Protein 4 (PBP4) Mutant (E183A, F241R)
    Other atoms: Cl (2); Na (2);
  16. 6c49 (Zn: 2) - Crystal Structure of Alcohol Dehydrogenase From Acinetobacter Baumannii
  17. 6c4s (Zn: 2) - Human Csrc SH3 Domain in Complex with Choline Kinase Fragment 60-69
  18. 6c4v (Zn: 3) - 1.9 Angstrom Resolution Crystal Structure of Acyl Carrier Protein Domain (Residues 1350-1461) of Polyketide Synthase PKS13 From Mycobacterium Tuberculosis
  19. 6c4x (Zn: 1) - Cross-Alpha Amyloid-Like Structure Alphaammem
  20. 6c6i (Zn: 4) - Crystal Structure of A Chimeric Ndm-1 Metallo-Beta-Lactamase Harboring the Imp-1 L3 Loop
  21. 6c6s (Zn: 2) - Cryoem Structure of E.Coli Rna Polymerase Elongation Complex Bound with Rfah
    Other atoms: Mg (1);
  22. 6c6t (Zn: 2) - Cryoem Structure of E.Coli Rna Polymerase Elongation Complex Bound with Rfah
    Other atoms: Mg (1);
  23. 6c6u (Zn: 2) - Cryoem Structure of E.Coli Rna Polymerase Elongation Complex Bound with Nusg
    Other atoms: Mg (1);
  24. 6c72 (Zn: 48) - Crystal Structure of A Tailspike Protein GP49 From Acinetobacter Baumannii Bacteriophage FRI1, A Capsular Polysaccharide Depolymerase
  25. 6c7d (Zn: 4) - Crystal Structure of Human Phosphodiesterase 2A with N-(1-Adamantyl)- 1-(2-Chlorophenyl)-4-Methyl-[1,2,4]Triazolo[4,3-A]Quinoxaline-8- Carboxamide
    Other atoms: Mg (4); Cl (4);
  26. 6c7e (Zn: 4) - Crystal Structure of Human Phosphodiesterase 2A with 1-(2- Chlorophenyl)-N,4-Dimethyl-[1,2,4]Triazolo[4,3-A]Quinoxaline-8- Carboxamide
    Other atoms: Mg (4); Cl (4);
  27. 6c7f (Zn: 3) - Crystal Structure of Human Phosphodiesterase 2A with 1-(2-Chloro-5- Isobutoxy-Phenyl)-N,4-Dimethyl-[1,2,4]Triazolo[4,3-A]Quinoxaline-8- Carboxamide
    Other atoms: Mg (3); Cl (3);
  28. 6c7g (Zn: 4) - Crystal Structure of Human Phosphodiesterase 2A with N-(1-Adamantyl)- 1-(2-Chloro-5-Isobutoxy-Phenyl)-4-Methyl-[1,2,4]Triazolo[4,3- A]Quinoxaline-8-Carboxamide
    Other atoms: Mg (4); Cl (4);
  29. 6c7i (Zn: 4) - Crystal Structure of Human Phosphodiesterase 2A with 1-(2-Chloro-5- Methoxy-Phenyl)-N-Isobutyl-4-Methyl-[1,2,4]Triazolo[4,3- A]Quinoxaline-8-Carboxamide
    Other atoms: Mg (4); Cl (4);
  30. 6c7j (Zn: 4) - Crystal Structure of Human Phosphodiesterase 2A with 1-(5-Tert-Butoxy- 2-Chloro-Phenyl)-N-Isobutyl-4-Methyl-[1,2,4]Triazolo[4,3- A]Quinoxaline-8-Carboxamide
    Other atoms: Mg (4); Cl (4);
  31. 6c7w (Zn: 1) - Carbonic Anhydrase 2 in Complex with [(2R,3S,4R,5R)-5-(6-Amino-9H- Purin-9-Yl)-3,4-Dihydroxytetrahydro-2-Furanyl]Methyl Sulfamate Inhibitor
    Other atoms: Na (1);
  32. 6c7x (Zn: 1) - Carbonic Anhydrase 2 in Complex with 2-Chloro-5'-O-Sulfamoyladenosine
    Other atoms: Cl (1); Na (1);
  33. 6c89 (Zn: 8) - Ndm-1 Beta-Lactamase Exhibits Differential Active Site Sequence Requirements For the Hydrolysis of Penicillin Versus Carbapenem Antibiotics
    Other atoms: Cl (2); Na (2);
  34. 6c9c (Zn: 1) - Crystal Structure of Lpxc From Pseudomonas Aeruginosa in Complex with Racemic Ligand PT803
    Other atoms: Cl (2);
  35. 6c9e (Zn: 2) - Crystal Structure of Cysteine Desulfurase From Legionella Pneumophila Philadelphia 1
  36. 6c9y (Zn: 2) - Cryo-Em Structure of E. Coli Rnap SIGMA70 Holoenzyme
    Other atoms: Mg (1);
  37. 6ca0 (Zn: 2) - Cryo-Em Structure of E. Coli Rnap SIGMA70 Open Complex
    Other atoms: Mg (1);
  38. 6ca2 (Zn: 1) - Engineering the Hydrophobic Pocket of Carbonic Anhydrase II
    Other atoms: Hg (1);
  39. 6cac (Zn: 4) - Crystal Structure of Ndm-1 Metallo-Beta-Lactamase Harboring An Insertion of A Pro Residue in L3 Loop
    Other atoms: Ni (5); Co (4); Cd (4); Ca (4);
  40. 6cao (Zn: 2) - Structure of the Ribosomal Decoding Complex at Ambient Temperature
    Other atoms: Mg (303); K (37);
Page generated: Fri Dec 24 10:31:26 2021

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