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Zinc in PDB 5z62: Structure of Human Cytochrome C Oxidase

Enzymatic activity of Structure of Human Cytochrome C Oxidase

All present enzymatic activity of Structure of Human Cytochrome C Oxidase:
1.9.3.1;

Other elements in 5z62:

The structure of Structure of Human Cytochrome C Oxidase also contains other interesting chemical elements:

Magnesium (Mg) 1 atom
Iron (Fe) 2 atoms
Copper (Cu) 3 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the Structure of Human Cytochrome C Oxidase (pdb code 5z62). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Structure of Human Cytochrome C Oxidase, PDB code: 5z62:

Zinc binding site 1 out of 1 in 5z62

Go back to Zinc Binding Sites List in 5z62
Zinc binding site 1 out of 1 in the Structure of Human Cytochrome C Oxidase


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structure of Human Cytochrome C Oxidase within 5.0Å range:
probe atom residue distance (Å) B Occ
F:Zn201

b:0.4
occ:1.00
SG F:CYS93 2.4 0.3 1.0
SG F:CYS113 2.5 0.3 1.0
CB F:CYS113 2.6 0.3 1.0
SG F:CYS91 3.0 98.4 1.0
SG F:CYS116 3.3 0.7 1.0
CB F:ALA118 3.7 0.6 1.0
CB F:CYS93 3.9 0.3 1.0
N F:CYS116 4.0 0.7 1.0
CA F:CYS113 4.0 0.3 1.0
CB F:CYS91 4.2 98.4 1.0
O F:GLY117 4.3 0.5 1.0
CB F:ARG115 4.5 0.7 1.0
C F:CYS113 4.5 0.3 1.0
CB F:CYS116 4.6 0.7 1.0
CA F:CYS93 4.6 0.3 1.0
OH F:TYR120 4.6 100.0 1.0
N F:GLY117 4.7 0.5 1.0
C F:GLY117 4.7 0.5 1.0
CA F:CYS116 4.7 0.7 1.0
N F:ARG115 4.7 0.7 1.0
O F:CYS113 4.7 0.3 1.0
N F:CYS113 4.7 0.3 1.0
C F:CYS116 4.8 0.7 1.0
CA F:ALA118 4.9 0.6 1.0
CA F:ARG115 4.9 0.7 1.0
C F:ARG115 5.0 0.7 1.0

Reference:

S.Zong, M.Wu, J.Gu, T.Liu, R.Guo, M.Yang. Structure of the Intact 14-Subunit Human Cytochrome C Oxidase. Cell Res. V. 28 1026 2018.
ISSN: ISSN 1748-7838
PubMed: 30030519
DOI: 10.1038/S41422-018-0071-1
Page generated: Wed Dec 16 11:25:05 2020

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