Zinc in PDB 5z2v: Crystal Structure of Recr From Pseudomonas Aeruginosa PAO1

The structure of Crystal Structure of Recr From Pseudomonas Aeruginosa PAO1, PDB code: 5z2v was solved by S.Che, Q.Zhang, M.Bartlam, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	50.00 / 2.20
Space group	P 61 2 2
Cell size a, b, c (Å), α, β, γ (°)	70.075, 70.075, 369.022, 90.00, 90.00, 120.00
R / Rfree (%)	17.8 / 21.3

The structure of Crystal Structure of Recr From Pseudomonas Aeruginosa PAO1 also contains other interesting chemical elements:

Sodium

(Na)

1 atom

The binding sites of Zinc atom in the Crystal Structure of Recr From Pseudomonas Aeruginosa PAO1 (pdb code 5z2v). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Crystal Structure of Recr From Pseudomonas Aeruginosa PAO1, PDB code: 5z2v:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Crystal Structure of Recr From Pseudomonas Aeruginosa PAO1


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Recr From Pseudomonas Aeruginosa PAO1 within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn201 b:19.8 occ:1.00 SG A:CYS69 2.3 21.9 1.0 SG A:CYS72 2.3 20.6 1.0 SG A:CYS60 2.3 17.0 1.0 SG A:CYS57 2.3 23.8 1.0 CB A:CYS57 3.2 20.4 1.0 CB A:CYS72 3.2 24.2 1.0 CB A:CYS60 3.3 18.0 1.0 CB A:CYS69 3.3 29.2 1.0 N A:CYS60 3.7 20.7 1.0 O A:HOH364 3.8 23.4 1.0 N A:CYS69 3.8 28.5 1.0 CA A:CYS60 4.1 21.0 1.0 N A:CYS72 4.1 25.0 1.0 CA A:CYS69 4.2 27.7 1.0 CG2 A:THR62 4.2 18.3 1.0 O A:HOH360 4.2 20.6 1.0 CA A:CYS72 4.3 24.4 1.0 CA A:CYS57 4.6 22.9 1.0 CB A:GLN59 4.7 32.6 1.0 C A:CYS60 4.8 18.8 1.0 N A:ARG61 4.8 18.9 1.0 C A:CYS69 4.8 24.4 1.0 C A:GLN59 4.8 25.2 1.0 O A:CYS69 4.9 26.5 1.0

Zinc binding site 2 out of 2 in the Crystal Structure of Recr From Pseudomonas Aeruginosa PAO1


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Crystal Structure of Recr From Pseudomonas Aeruginosa PAO1 within 5.0Å range: probe atom residue distance (Å) B Occ B:Zn201 b:19.7 occ:1.00 SG B:CYS72 2.3 19.9 1.0 SG B:CYS69 2.3 25.3 1.0 SG B:CYS60 2.3 17.5 1.0 SG B:CYS57 2.3 17.9 1.0 CB B:CYS57 3.2 19.4 1.0 CB B:CYS60 3.2 20.1 1.0 CB B:CYS72 3.2 24.0 1.0 CB B:CYS69 3.4 34.0 1.0 N B:CYS60 3.7 20.4 1.0 O B:HOH358 3.7 19.9 1.0 N B:CYS69 3.9 35.2 1.0 N B:CYS72 4.0 25.3 1.0 CA B:CYS60 4.0 20.0 1.0 O B:HOH354 4.0 20.9 1.0 CA B:CYS72 4.2 24.8 1.0 CA B:CYS69 4.2 34.7 1.0 CG2 B:THR62 4.3 20.7 1.0 CB B:GLN59 4.6 29.3 1.0 CA B:CYS57 4.7 20.5 1.0 C B:CYS60 4.8 17.9 1.0 C B:GLN59 4.8 25.5 1.0 N B:ARG61 4.8 17.8 1.0 C B:CYS69 4.9 31.8 1.0 O B:CYS69 5.0 28.6 1.0

S.Che, Y.Chen, Y.Liang, Q.Zhang, M.Bartlam. Crystal Structure of Recr, A Member of the Recfor Dna-Repair Pathway, From Pseudomonas Aeruginosa PAO1. Acta Crystallogr F Struct V. 74 222 2018BIOL Commun.
ISSN: ESSN 2053-230X
PubMed: 29633970
DOI: 10.1107/S2053230X18003503