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Zinc in PDB, part 495 (files: 19761-19800), PDB 8aaj-8ams

Experimental structures of coordination spheres of Zinc (Zn) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Zinc atoms. PDB files: 19761-19800 (PDB 8aaj-8ams).
  1. 8aaj (Zn: 1) - Crystal Structure of the Pyrococcus Abyssi Rpa (Apo Form)
  2. 8aas (Zn: 1) - Crystal Structure of the Pyrococcus Abyssi Rpa Trimerization Core Bound to Poly-DT20 Ssdna
    Other atoms: Ca (5);
  3. 8ab0 (Zn: 3) - Complex of Reco-Recr-Dna From Thermus Thermophilus.
  4. 8aby (Zn: 2) - Rna Polymerase Bound to Purified in Vitro Transcribed Regulatory Rna Putl - Pause Prone, Closed Clamp State
    Other atoms: Mg (1);
  5. 8abz (Zn: 2) - Rna Polymerase at U-Rich Pause Bound to Non-Regulatory Rna - Pause Prone, Closed Clamp State
    Other atoms: Mg (1);
  6. 8ac0 (Zn: 2) - Rna Polymerase at U-Rich Pause Bound to Regulatory Rna Putl - Active, Closed Clamp State
    Other atoms: Mg (1);
  7. 8ac1 (Zn: 2) - Rna Polymerase at U-Rich Pause Bound to Non-Regulatory Rna - Inactive, Open Clamp State
    Other atoms: Mg (1);
  8. 8ac2 (Zn: 2) - Rna Polymerase- Post-Terminated, Open Clamp State
    Other atoms: Mg (1);
  9. 8ac7 (Zn: 8) - Structure of Pseudomonas Aeruginosa Aminopeptidase, Paap
    Other atoms: Na (9);
  10. 8ac9 (Zn: 7) - Structure of Pseudomonas Aeruginosa Aminopeptidase, PAAP_T
  11. 8acg (Zn: 18) - Structure of Pseudomonas Aeruginosa Aminopeptidase, PAAP_T E340A Mutant
    Other atoms: Mg (3);
  12. 8ack (Zn: 10) - Structure of Pseudomonas Aeruginosa Aminopeptidase, Paap
    Other atoms: Na (9); As (2);
  13. 8acp (Zn: 2) - Rna Polymerase at U-Rich Pause Bound to Regulatory Rna Putl - Inactive, Open Clamp State
    Other atoms: Mg (1);
  14. 8acr (Zn: 3) - Structure of Pseudomonas Aeruginosa Aminopeptidase, Paap
    Other atoms: Na (1);
  15. 8acv (Zn: 2) - WELO5* Bound to Zn(II), Cl, and 2-Oxoglutarate
    Other atoms: Cl (2);
  16. 8ad1 (Zn: 2) - Rna Polymerase at U-Rich Pause Bound to Rna Putl Triple Mutant - Pause Prone, Closed Clamp State
    Other atoms: Mg (1);
  17. 8ad2 (Zn: 23) - Tobacco Lectin Nictaba in Complex with Triacetylchitotriose
    Other atoms: Cl (1);
  18. 8adh (Zn: 2) - Interdomain Motion in Liver Alcohol Dehydrogenase. Structural and Energetic Analysis of the Hinge Bending Mode
  19. 8adl (Zn: 28) - Cryo-Em Structure of the Sea Complex
  20. 8aen (Zn: 4) - Human Acetylcholinesterase in Complex with Zinc and N,N,N-Trimethyl-2- Oxo-2-(2-(Pyridin-2-Ylmethylene)Hydrazineyl)Ethan-1-Aminium
    Other atoms: Cl (36); Mg (12);
  21. 8aev (Zn: 5) - Human Acetylcholinesterase in Complex with N,N,N-Trimethyl-2-Oxo-2-(2- (Pyridin-2-Ylmethylene)Hydrazineyl)Ethan-1-Aminium
    Other atoms: Cl (31); Mg (14);
  22. 8af1 (Zn: 1) - Beta-Lytic Protease From Lysobacter Capsici
    Other atoms: Cl (1);
  23. 8ajq (Zn: 16) - Crystal Structure of PA2722 From Pseudomonas Aeruginosa PAO1
  24. 8ak4 (Zn: 4) - Structure of the C-Terminally Truncated Nad+-Dependent Dna Ligase From the Poly-Extremophile Deinococcus Radiodurans
    Other atoms: Mn (2);
  25. 8ak5 (Zn: 2) - Human SIRT6 in Complex with Adp-Ribose and Fragment Pyroglutamic Acid
  26. 8ak6 (Zn: 2) - Human SIRT6 in Complex with Adp-Ribose and Fragment Sulfamethoxazole
  27. 8ak7 (Zn: 2) - Human SIRT6 in Complex with Adp-Ribose and Fragment 6-O-Methylguanine
    Other atoms: Cl (4);
  28. 8ak8 (Zn: 2) - Human SIRT6 in Complex with Adp-Ribose and Fragment 4-Hydroxybenzamide
    Other atoms: Cl (4);
  29. 8ak9 (Zn: 2) - Human SIRT6 in Complex with Adp-Ribose and Fragment Isatin
    Other atoms: Cl (2);
  30. 8aka (Zn: 2) - Human SIRT6 in Complex with Adp-Ribose and Fragment Cis-Resveratrol
    Other atoms: Cl (7);
  31. 8akb (Zn: 2) - Human SIRT6 in Complex with Adp-Ribose and Fragment 4-Nitrocatechol
  32. 8akc (Zn: 2) - Human SIRT6 in Complex with Adp-Ribose and Fragment 3-(Acetylamino) Thiophene-2-Carboxylic Acid
    Other atoms: Cl (3);
  33. 8akd (Zn: 2) - Human SIRT6 in Complex with Adp-Ribose and Fragment 1-Methyl-L- Histidine
  34. 8ake (Zn: 2) - Human SIRT6 in Complex with Adp-Ribose and Fragment Nicotinamide
  35. 8akf (Zn: 2) - Human SIRT6 in Complex with Adp-Ribose and Fragment 3-Aminobenzamide
    Other atoms: Cl (1);
  36. 8akg (Zn: 2) - Human SIRT6 in Complex with Adp-Ribose and Fragment 4-Amino-6- Chlorobenzene-1,3-Disulfonamide
    Other atoms: Cl (4);
  37. 8aly (Zn: 20) - Cryo-Em Structure of Human Tankyrase 2 Sam-Parp Filament (G1032W Mutant)
  38. 8alz (Zn: 2) - Cryo-Em Structure of ASCC3 in Complex with ASC1
  39. 8am1 (Zn: 2) - Human Butyrylcholinesterase in Complex with Zinc and N,N,N-Trimethyl- 2-Oxo-2-(2-(Pyridin-2-Ylmethylene)Hydrazineyl)Ethan-1-Aminium
    Other atoms: Cl (7);
  40. 8ams (Zn: 4) - Complex of Human TRIM2 Ring Domain, UBCH5C, and Ubiquitin
Page generated: Tue Feb 25 12:09:47 2025

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