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Zinc in PDB, part 422 (files: 16841-16880), PDB 7ay1-7bbd

Experimental structures of coordination spheres of Zinc (Zn) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Zinc atoms. PDB files: 16841-16880 (PDB 7ay1-7bbd).
  1. 7ay1 (Zn: 1) - Cryo-Em Structure of USP1-UAF1 Bound to Mono-Ubiquitinated FANCD2, and Fanci
  2. 7ay2 (Zn: 2) - Crystal Structure of Truncated USP1-UAF1 Reacted with Ubiquitin-Prg
  3. 7ay6 (Zn: 2) - Crystal Structure of the PDE4D Catalytic Domain in Complex with Gebr- 41B
    Other atoms: Mg (8);
  4. 7ayj (Zn: 2) - Metallo Beta-Lactamse Vim-1 with A Sulfamoyl Inhibitor.
    Other atoms: F (1);
  5. 7b0i (Zn: 3) - Structure of A Minimal SF3B Core in Complex with Spliceostatin A (Form II)
  6. 7b0y (Zn: 8) - Structure of A Transcribing Rna Polymerase II-U1 Snrnp Complex
    Other atoms: Mg (1);
  7. 7b1w (Zn: 12) - Crystal Structure of Plastidial Ribulose Epimerase RPE1 From the Model Alga Chlamydomonas Reinhardtii
  8. 7b2i (Zn: 2) - Heterodimeric Trna-Guanine Transglycosylase From Mouse
  9. 7b38 (Zn: 1) - Torpedo Californica Acetylcholinesterase Complexed with Mg+2
    Other atoms: Mg (4);
  10. 7b3b (Zn: 2) - Structure of Elongating Sars-Cov-2 Rna-Dependent Rna Polymerase with Remdesivir at Position -3 (Structure 1)
  11. 7b3c (Zn: 2) - Structure of Elongating Sars-Cov-2 Rna-Dependent Rna Polymerase with Remdesivir at Position -4 (Structure 2)
  12. 7b3d (Zn: 2) - Structure of Elongating Sars-Cov-2 Rna-Dependent Rna Polymerase with Amp at Position -4 (Structure 3)
  13. 7b46 (Zn: 4) - Structural Basis of Reactivation of Oncogenic P53 Mutants By A Small Molecule: Methylene Quinuclidinone (Mq). Human Wild-Type P53DBD Bound to Dna and Mq: Wt-Dna-Mq (P1)
  14. 7b47 (Zn: 4) - Structural Basis of Reactivation of Oncogenic P53 Mutants By A Small Molecule: Methylene Quinuclidinone (Mq). Human P53DBD-R273H Mutant Bound to Mq: R273H-Mq (I)
  15. 7b48 (Zn: 4) - Structural Basis of Reactivation of Oncogenic P53 Mutants By A Small Molecule: Methylene Quinuclidinone (Mq). Human P53DBD-R273H Mutant Bound to Mq: R273H-Mq (II)
  16. 7b49 (Zn: 2) - Structural Basis of Reactivation of Oncogenic P53 Mutants By A Small Molecule: Methylene Quinuclidinone (Mq). Human P53DBD-R273H Mutant Bound to Dna and Mq: R273H-Dna-Mq
  17. 7b4a (Zn: 2) - Structural Basis of Reactivation of Oncogenic P53 Mutants By A Small Molecule: Methylene Quinuclidinone (Mq). Human P53DBD-R273H Mutant Bound to Dna: R273H-Dna
  18. 7b4b (Zn: 4) - Structural Basis of Reactivation of Oncogenic P53 Mutants By A Small Molecule: Methylene Quinuclidinone (Mq). Human P53DBD-R273C Mutant Bound to Mq: R273C-Mq (I)
  19. 7b4c (Zn: 4) - Structural Basis of Reactivation of Oncogenic P53 Mutants By A Small Molecule: Methylene Quinuclidinone (Mq). Human P53DBD-R273C Mutant Bound to Mq: R273C-Mq (II)
  20. 7b4d (Zn: 1) - Structural Basis of Reactivation of Oncogenic P53 Mutants By A Small Molecule: Methylene Quinuclidinone (Mq). Human P53DBD-R273C/S240R Double Mutant Bound to Dna and Mq: R273C/S240R-Dna-Mq
  21. 7b4e (Zn: 1) - Structural Basis of Reactivation of Oncogenic P53 Mutants By A Small Molecule: Methylene Quinuclidinone (Mq). Human P53DBD-R282W Mutant Bound to Dna and Mq: R282W-Dna-Mq
  22. 7b4f (Zn: 1) - Structural Basis of Reactivation of Oncogenic P53 Mutants By A Small Molecule: Methylene Quinuclidinone (Mq). Human P53DBD-R282W Mutant Bound to Dna: R282W-Mq (I)
  23. 7b4g (Zn: 1) - Structural Basis of Reactivation of Oncogenic P53 Mutants By A Small Molecule: Methylene Quinuclidinone (Mq). Human P53DBD-R282W Mutant Bound to Dna: R282W-Mq (II)
  24. 7b4h (Zn: 1) - Structural Basis of Reactivation of Oncogenic P53 Mutants By A Small Molecule: Methylene Quinuclidinone (Mq). Human Wild-Type P53DBD Bound to Dna and Mq: Wt-Dna-Mq (III)
  25. 7b4n (Zn: 1) - Structural Basis of Reactivation of Oncogenic P53 Mutants By A Small Molecule: Methylene Quinuclidinone (Mq). Human Wild-Type P53DBD Bound to Dna and Mq: Wt-Dna-Mq (II)
  26. 7b5l (Zn: 9) - Ubiquitin Ligation to F-Box Protein Substrates By Scf-Rbr E3-E3 Super- Assembly: NEDD8-CUL1-RBX1-SKP1-SKP2-CKSHS1-Cyclin A-CDK2-P27- UBE2L3~Ub~ARIH1. Transition State 1
  27. 7b5m (Zn: 5) - Ubiquitin Ligation to F-Box Protein Substrates By Scf-Rbr E3-E3 Super- Assembly: CUL1-RBX1-SKP1-SKP2-CKSHS1-P27~Ub~ARIH1. Transition State 2
  28. 7b5n (Zn: 9) - Ubiquitin Ligation to F-Box Protein Substrates By Scf-Rbr E3-E3 Super- Assembly: NEDD8-CUL1-RBX1-UBE2L3~Ub~ARIH1.
  29. 7b5s (Zn: 5) - Ubiquitin Ligation to F-Box Protein Substrates By Scf-Rbr E3-E3 Super- Assembly: CUL1-RBX1-ARIH1 Ariadne. Transition State 1
  30. 7b7u (Zn: 6) - Cryo-Em Structure of Mammalian Rna Polymerase II in Complex with Human RPAP2
  31. 7b83 (Zn: 1) - Structure of Sars-Cov-2 Main Protease Bound to Pyrithione Zinc
    Other atoms: Cl (1);
  32. 7b8e (Zn: 1) - Torpedo Californica Acetylcholinesterase Complexed with Ca+2
    Other atoms: Ca (1);
  33. 7b91 (Zn: 3) - Structure of A Minimal SF3B Core in Complex with Pladienolide D (Form I)
  34. 7b92 (Zn: 3) - Structure of A Minimal SF3B Core in Complex with Sudemycin D6 (Form II)
  35. 7b93 (Zn: 1) - Cryo-Em Structure of Mitochondrial Complex I From Mus Musculus Inhibited By Iacs-2858 at 3.0 A
    Other atoms: F (3); Fe (28);
  36. 7b9c (Zn: 3) - Structure of A Minimal SF3B Core in Complex with Spliceostatin A (Form I)
  37. 7b9h (Zn: 2) - Crystal Structure of the PDE4D Catalytic Domain in Complex with Gebr- 42A
    Other atoms: Mg (8);
  38. 7bad (Zn: 1) - Crystal Structure of Pafb in Complex with P-Sulfonato-Calix[8]Arene and Zinc
  39. 7baf (Zn: 3) - Crystal Structure of Pafb in Complex with Zinc
  40. 7bbd (Zn: 2) - Crystal Structure of Monoubiquitinated TRIM21 Ring (Ub-Ring) in Complex with Ubiquitin Charged UBE2N (UBE2N~Ub) and UBE2V2
Page generated: Fri Dec 24 10:37:26 2021

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