Zinc in PDB 6zct: Nonstructural Protein 10 (NSP10) From Sars Cov-2

All present enzymatic activity of Nonstructural Protein 10 (NSP10) From Sars Cov-2:
3.4.19.12; 3.4.22.69;

The structure of Nonstructural Protein 10 (NSP10) From Sars Cov-2, PDB code: 6zct was solved by S.Z.Fisher, F.Kozielski, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	33.75 / 2.55
Space group	I 21 3
Cell size a, b, c (Å), α, β, γ (°)	106.736, 106.736, 106.736, 90.00, 90.00, 90.00
R / Rfree (%)	19 / 19.5

The binding sites of Zinc atom in the Nonstructural Protein 10 (NSP10) From Sars Cov-2 (pdb code 6zct). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Nonstructural Protein 10 (NSP10) From Sars Cov-2, PDB code: 6zct:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Nonstructural Protein 10 (NSP10) From Sars Cov-2


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Nonstructural Protein 10 (NSP10) From Sars Cov-2 within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn201 b:50.7 occ:1.00 NE2 A:HIS83 2.1 53.7 1.0 SG A:CYS77 2.2 45.8 1.0 SG A:CYS90 2.2 51.1 1.0 SG A:CYS74 2.3 47.1 1.0 CE1 A:HIS83 3.0 48.4 1.0 CD2 A:HIS83 3.1 51.0 1.0 CB A:CYS74 3.2 44.0 1.0 CB A:CYS77 3.4 37.5 1.0 CB A:CYS90 3.5 59.0 1.0 N A:CYS77 3.6 47.4 1.0 CA A:CYS77 4.0 44.7 1.0 ND1 A:HIS83 4.2 55.8 1.0 CG A:HIS83 4.2 56.9 1.0 CA A:CYS90 4.6 63.5 1.0 C A:TYR76 4.6 47.5 1.0 CB A:TYR76 4.6 47.8 1.0 CA A:CYS74 4.6 41.8 1.0 N A:LYS93 4.9 51.7 1.0 O A:CYS74 5.0 45.4 1.0 C A:CYS74 5.0 46.9 1.0 CA A:TYR76 5.0 46.6 1.0

Zinc binding site 2 out of 2 in the Nonstructural Protein 10 (NSP10) From Sars Cov-2


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Nonstructural Protein 10 (NSP10) From Sars Cov-2 within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn202 b:75.6 occ:1.00 SG A:CYS128 2.3 65.5 1.0 SG A:CYS120 2.3 83.5 1.0 SG A:CYS117 2.4 69.5 1.0 SG A:CYS130 2.5 81.3 1.0 CB A:CYS120 2.7 64.1 1.0 CB A:CYS117 3.1 60.9 1.0 N A:CYS120 3.3 71.8 1.0 CB A:CYS130 3.3 82.0 1.0 CA A:CYS120 3.5 66.3 1.0 CB A:CYS128 3.6 72.0 1.0 CA A:CYS128 4.3 76.2 1.0 N A:CYS130 4.3 77.9 1.0 CB A:VAL119 4.4 74.0 1.0 CA A:CYS130 4.4 82.2 1.0 C A:VAL119 4.5 72.2 1.0 CA A:CYS117 4.6 63.3 1.0 N A:SER129 4.7 89.6 1.0 C A:CYS128 4.7 85.2 1.0 C A:CYS120 4.8 64.6 1.0 CA A:VAL119 4.9 70.0 1.0 N A:VAL119 4.9 70.8 1.0

S.Z.Fisher, F.Kozielski. Not Published To Be Published.