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Zinc in PDB, part 416 (files: 16601-16640), PDB 7aq5-7bum

Experimental structures of coordination spheres of Zinc (Zn) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Zinc atoms. PDB files: 16601-16640 (PDB 7aq5-7bum).
  1. 7aq5 (Zn: 2) - Pseudomonas Stutzeri Nitrous Oxide Reductase Mutant, H583N
    Other atoms: Cl (3); Cu (8); Na (2); K (1); Ca (2);
  2. 7aq8 (Zn: 2) - Pseudomonas Stutzeri Nitrous Oxide Reductase Mutant, H583Y/D576A
    Other atoms: K (2); Ca (2); Cl (2); Na (2); Cu (8);
  3. 7aq9 (Zn: 2) - Pseudomonas Stutzeri Nitrous Oxide Reductase Mutant, H583W
    Other atoms: Ca (1); K (1); Na (2); Cu (6); Cl (3);
  4. 7aqp (Zn: 1) - T262S, A251S, L254S, L211Q Mutant of Carboxypeptidase T From Thermoactinomyces Vulgaris
    Other atoms: Ca (4);
  5. 7aru (Zn: 1) - L254N Mutant of Carboxypeptidase T From Thermoactinomyces Vulgaris N- Sulfamoyl-L-Valine
    Other atoms: Ca (5);
  6. 7asu (Zn: 4) - Crystal Structure of TWHD1 of RPC5 Subunit of Human Rna Polymerase III
  7. 7at1 (Zn: 2) - Crystal Structures of Aspartate Carbamoyltransferase Ligated with Phosphonoacetamide, Malonate, and Ctp or Atp at 2.8-Angstroms Resolution and Neutral P*H
  8. 7at8 (Zn: 7) - Histone H3 Recognition By Nucleosome-Bound PRC2 Subunit EZH2.
  9. 7auc (Zn: 1) - Crystal Structure of An Engineered Helicase Domain Construct For Human Bloom Syndrome Protein (Blm)
    Other atoms: Mg (2); Ca (2);
  10. 7aud (Zn: 6) - Structure of An Engineered Helicase Domain Construct For Human Bloom Syndrome Protein (Blm)
    Other atoms: Mg (6);
  11. 7auz (Zn: 1) - LTA4 Hydrolase in Complex with Compound LYS006
    Other atoms: F (1); Yb (3); Cl (1);
  12. 7av0 (Zn: 1) - LTA4 Hydrolase in Complex with Compound R(13)
    Other atoms: Cl (1); Yb (3);
  13. 7av1 (Zn: 1) - LTA4 Hydrolase in Complex with FRAGMENT2
    Other atoms: Yb (2);
  14. 7av2 (Zn: 1) - LTA4 Hydrolase in Complex with FRAGMENT1
    Other atoms: Yb (2);
  15. 7av7 (Zn: 12) - Crystal Structure of S-Nitrosylated Nitrosoglutathione Reductase(Gsnor)From Chlamydomonas Reinhardtii, in Complex with Nad+
    Other atoms: Cl (1);
  16. 7b0y (Zn: 8) - Structure of A Transcribing Rna Polymerase II-U1 Snrnp Complex
    Other atoms: Mg (1);
  17. 7b3b (Zn: 2) - Structure of Elongating Sars-Cov-2 Rna-Dependent Rna Polymerase with Remdesivir at Position -3 (Structure 1)
  18. 7b3c (Zn: 2) - Structure of Elongating Sars-Cov-2 Rna-Dependent Rna Polymerase with Remdesivir at Position -4 (Structure 2)
  19. 7b3d (Zn: 2) - Structure of Elongating Sars-Cov-2 Rna-Dependent Rna Polymerase with Amp at Position -4 (Structure 3)
  20. 7b5l (Zn: 9) - Ubiquitin Ligation to F-Box Protein Substrates By Scf-Rbr E3-E3 Super- Assembly: NEDD8-CUL1-RBX1-SKP1-SKP2-CKSHS1-Cyclin A-CDK2-P27- UBE2L3~Ub~ARIH1. Transition State 1
  21. 7b5m (Zn: 5) - Ubiquitin Ligation to F-Box Protein Substrates By Scf-Rbr E3-E3 Super- Assembly: CUL1-RBX1-SKP1-SKP2-CKSHS1-P27~Ub~ARIH1. Transition State 2
  22. 7b5n (Zn: 9) - Ubiquitin Ligation to F-Box Protein Substrates By Scf-Rbr E3-E3 Super- Assembly: NEDD8-CUL1-RBX1-UBE2L3~Ub~ARIH1.
  23. 7b5s (Zn: 5) - Ubiquitin Ligation to F-Box Protein Substrates By Scf-Rbr E3-E3 Super- Assembly: CUL1-RBX1-ARIH1 Ariadne. Transition State 1
  24. 7b83 (Zn: 1) - Structure of Sars-Cov-2 Main Protease Bound to Pyrithione Zinc
    Other atoms: Cl (1);
  25. 7bbd (Zn: 2) - Crystal Structure of Monoubiquitinated TRIM21 Ring (Ub-Ring) in Complex with Ubiquitin Charged UBE2N (UBE2N~Ub) and UBE2V2
  26. 7bh9 (Zn: 1) - Sars-Cov-2 Rbd-62 in Complex with ACE2 Peptidase Domain
  27. 7bp1 (Zn: 1) - Crystal Structure of 2, 3-Dihydroxybenzoic Acid Decarboxylase From Fusarium Oxysporum in Complex with Catechol
  28. 7bpc (Zn: 2) - Crystal Structure of 2, 3-Dihydroxybenzoic Acid Decarboxylase From Fusarium Oxysporum in Complex with 2,5-Dhba
  29. 7bpi (Zn: 2) - The Crystal Structue of PDE10A Complexed with 14
    Other atoms: Mg (2);
  30. 7bq7 (Zn: 2) - Crystal Structure of 2019-Ncov NSP16-NSP10 Complex
  31. 7bqu (Zn: 2) - Cereblon in Complex with SALL4 and (S)-Thalidomide
  32. 7bqv (Zn: 2) - Cereblon in Complex with SALL4 and (S)-5-Hydroxythalidomide
  33. 7bre (Zn: 2) - The Crystal Structure of MLL2 in Complex with ASH2L and RBBP5
  34. 7btf (Zn: 2) - Sars-Cov-2 Rna-Dependent Rna Polymerase in Complex with Cofactors in Reduced Condition
  35. 7btv (Zn: 8) - Crystal Structure of EHMT2 Set Domain in Complex with Compound 5.
  36. 7bu2 (Zn: 4) - Structure of Alcohol Dehydrogenase Yjgb From Escherichia Coli
  37. 7bu3 (Zn: 4) - Structure of Alcohol Dehydrogenase Yjgb in Complex with Nadp From Escherichia Coli
  38. 7buc (Zn: 8) - Crystal Structure of EHMT2 Set Domain in Complex with Compound 13
  39. 7buj (Zn: 2) - Mcgas Bound with Pppgpg
    Other atoms: Mn (4);
  40. 7bum (Zn: 2) - Mcgas Bound with Pgpa
Page generated: Wed Mar 3 16:18:44 2021

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