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Zinc in PDB 6xqj: Structure of Hiv-1 Vpr in Complex with the Human Nucleotide Excision Repair Protein HHR23A

Zinc Binding Sites:

The binding sites of Zinc atom in the Structure of Hiv-1 Vpr in Complex with the Human Nucleotide Excision Repair Protein HHR23A (pdb code 6xqj). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Structure of Hiv-1 Vpr in Complex with the Human Nucleotide Excision Repair Protein HHR23A, PDB code: 6xqj:

Zinc binding site 1 out of 1 in 6xqj

Go back to Zinc Binding Sites List in 6xqj
Zinc binding site 1 out of 1 in the Structure of Hiv-1 Vpr in Complex with the Human Nucleotide Excision Repair Protein HHR23A


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structure of Hiv-1 Vpr in Complex with the Human Nucleotide Excision Repair Protein HHR23A within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn401

b:0.0
occ:1.00
ND1 A:HIS33 2.1 0.0 1.0
ND1 A:HIS78 2.1 0.0 1.0
NE2 A:HIS71 2.1 0.0 1.0
SG A:CYS76 2.3 0.0 1.0
HB2 A:HIS78 2.8 0.0 1.0
HB3 A:HIS33 3.0 0.0 1.0
CE1 A:HIS71 3.0 0.0 1.0
CE1 A:HIS33 3.0 0.0 1.0
CE1 A:HIS78 3.0 0.0 1.0
HA A:HIS33 3.1 0.0 1.0
CG A:HIS33 3.1 0.0 1.0
CG A:HIS78 3.1 0.0 1.0
CD2 A:HIS71 3.1 0.0 1.0
H A:HIS78 3.2 0.0 1.0
HA A:CYS76 3.2 0.0 1.0
HE1 A:HIS78 3.3 0.0 1.0
HE1 A:HIS33 3.3 0.0 1.0
HE1 A:HIS71 3.3 0.0 1.0
HD2 A:HIS71 3.3 0.0 1.0
CB A:CYS76 3.4 0.0 1.0
HB2 A:CYS76 3.4 0.0 1.0
CB A:HIS33 3.4 0.0 1.0
CB A:HIS78 3.4 0.0 1.0
CA A:CYS76 3.7 0.0 1.0
CA A:HIS33 3.7 0.0 1.0
N A:HIS78 4.0 0.0 1.0
ND1 A:HIS71 4.2 0.0 1.0
H A:ARG77 4.2 0.0 1.0
CD2 A:HIS33 4.2 0.0 1.0
NE2 A:HIS33 4.2 0.0 1.0
CD2 A:HIS78 4.2 0.0 1.0
NE2 A:HIS78 4.2 0.0 1.0
C A:CYS76 4.2 0.0 1.0
CG A:HIS71 4.2 0.0 1.0
HB3 A:HIS78 4.3 0.0 1.0
CA A:HIS78 4.3 0.0 1.0
HB3 A:CYS76 4.3 0.0 1.0
N A:ARG77 4.4 0.0 1.0
HB2 A:HIS33 4.5 0.0 1.0
O A:HIS33 4.5 0.0 1.0
O A:HIS78 4.6 0.0 1.0
C A:HIS33 4.6 0.0 1.0
OD1 A:ASN359 4.7 0.0 1.0
N A:HIS33 4.8 0.0 1.0
O A:ARG32 4.9 0.0 1.0
C A:HIS78 4.9 0.0 1.0
O A:CYS76 4.9 0.0 1.0

Reference:

I.-J.L.Byeon, G.Calero, Y.Wu, C.H.Byeon, J.Jung, M.Delucia, X.Zhou, S.Weiss, J.Ahn, C.Hao, J.Skowronski, A.M.Gronenborn. Structure of Hiv-1 Vpr in Complex with the Human Nucleotide Excision Repair Protein HHR23A To Be Published.
Page generated: Thu Nov 25 10:55:13 2021

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