Zinc in PDB 6xuo: Mature Recombinant Horse Ngf

Protein crystallography data

The structure of Mature Recombinant Horse Ngf, PDB code: 6xuo was solved by G.Kalnins, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 54.25 / 2.80
Space group I 21 3
Cell size a, b, c (Å), α, β, γ (°) 108.490, 108.490, 108.490, 90.00, 90.00, 90.00
R / Rfree (%) 21.9 / 26.6

Zinc Binding Sites:

The binding sites of Zinc atom in the Mature Recombinant Horse Ngf (pdb code 6xuo). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Mature Recombinant Horse Ngf, PDB code: 6xuo:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 6xuo

Go back to Zinc Binding Sites List in 6xuo
Zinc binding site 1 out of 2 in the Mature Recombinant Horse Ngf


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Mature Recombinant Horse Ngf within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn201

b:76.9
occ:1.00
OD2 A:ASP24 1.8 82.5 1.0
CG A:ASP24 2.4 77.2 1.0
OD1 A:ASP24 2.4 74.9 1.0
CB A:ASP24 3.8 69.4 1.0
O A:ASP24 4.3 79.7 1.0
CA A:ASP24 4.7 71.7 1.0
C A:ASP24 5.0 78.0 1.0

Zinc binding site 2 out of 2 in 6xuo

Go back to Zinc Binding Sites List in 6xuo
Zinc binding site 2 out of 2 in the Mature Recombinant Horse Ngf


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Mature Recombinant Horse Ngf within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn202

b:74.5
occ:0.33
OE1 A:GLU35 2.0 72.2 1.0
OE2 A:GLU35 2.5 70.8 1.0
CD A:GLU35 2.5 74.0 1.0
OG1 A:THR27 4.0 78.5 1.0
CG A:GLU35 4.0 71.5 1.0
CB A:THR27 4.9 70.4 1.0
CB A:GLU35 5.0 74.6 1.0

Reference:

G.Kalnins, K.Tars. Mature Horse Nerve Growth Factor at 2.8 Angstrom Resolution To Be Published.
Page generated: Wed Dec 16 13:12:09 2020

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