Zinc in PDB, part 486 (files: 19401-19440),
PDB 830c-8ac7
Experimental structures of coordination spheres of Zinc (Zn) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Zinc atoms. PDB files: 19401-19440 (PDB 830c-8ac7).
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830c (Zn: 4) - Collagenase-3 (Mmp-13) Complexed to A Sulphone-Based Hydroxamic Acid
Other atoms:
Cl (2);
Ca (2);
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8a0b (Zn: 3) - Inhibitor Binding to HDAC2
Other atoms:
Na (3);
Ca (3);
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8a0c (Zn: 2) - Capsular Polysaccharide Synthesis Multienzyme in Complex with Cmp
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8a23 (Zn: 2) - Crystal Structure of Sars-Cov-2 NSP10/NSP16 Methyltransferase in Complex with TO383
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8a28 (Zn: 2) - Structure of the Astacin Zymogen of Last-Mam From Limulus Polyphemus
Other atoms:
Mg (1);
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8a31 (Zn: 2) - P53 Cancer Mutant Y220C in Complex with Iodophenol-Based Small- Molecule Stabilizer JC694
Other atoms:
F (3);
I (6);
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8a32 (Zn: 2) - P53 Cancer Mutant Y220C in Complex with Iodophenol-Based Small- Molecule Stabilizer JC769
Other atoms:
I (4);
F (4);
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8a38 (Zn: 7) - Ring Domain of Human TRIM2
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8a3n (Zn: 4) - Geissoschizine Synthase From Catharanthus Roseus - Binary Complex with Nadp+
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8a3t (Zn: 3) - S. Cerevisiae Apc/C-CDH1 Complex
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8a40 (Zn: 11) - Structure of Mammalian Pol II-Tfiis Elongation Complex
Other atoms:
Mg (3);
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8a4i (Zn: 8) - Crystal Structure of SALL4 Zinc Finger Cluster 4 with at-Rich Dna
Other atoms:
Mg (3);
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8a4m (Zn: 3) - Crystal Structure of the Vim-2 Acquired Metallo-Beta-Lactamase in Complex with Compound 8 (Jmv-7061)
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8a57 (Zn: 2) - Cryo-Em Structure of Hflxr Bound to the Listeria Monocytogenes 50S Ribosomal Subunit.
Other atoms:
Mg (160);
K (1);
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8a58 (Zn: 4) - X-Ray Structure of TRIM21 Ring E3 Ligase in Complex with E2 Enzyme UBE2W
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8a5e (Zn: 1) - Cryo-Em Structure of the Electron Bifurcating Fe-Fe Hydrogenase Hydabc Complex From Acetobacterium Woodii in the Reduced State
Other atoms:
Fe (54);
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8a5i (Zn: 2) - Cryo-Em Structure of Lincomycin Bound to the Listeria Monocytogenes 50S Ribosomal Subunit.
Other atoms:
K (1);
Mg (165);
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8a63 (Zn: 2) - Cryo-Em Structure of Listeria Monocytogenes 50S Ribosomal Subunit.
Other atoms:
Mg (164);
K (1);
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8a67 (Zn: 2) - Branched LYS48- and LYS63-Linked Tri-Ubiquitin (K48-K63-UB3) in Complex with Matured Synthetic Nanobody NBSL3.3Q (3RD Generation)
Other atoms:
Cl (1);
Na (2);
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8a6t (Zn: 2) - Cryo-Em Structure of the Electron Bifurcating Fe-Fe Hydrogenase Hydabc Complex From Thermoanaerobacter Kivui in the Reduced State
Other atoms:
Fe (72);
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8a76 (Zn: 4) - Metallo-Beta-Lactamase Ndm-1 in Complex with 1,2,4-Triazole-3-Thione Compound 26
Other atoms:
Ca (4);
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8a7d (Zn: 1) - Partial Dimer Complex of Papp-A and Its Inhibitor STC2
Other atoms:
Ca (8);
-
8a7e (Zn: 2) - Papp-A Dimer in Complex with Its Inhibitor STC2
Other atoms:
Ca (16);
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8a8d (Zn: 2) - Atp Sulfurylase From Methanothermococcus Thermolithotrophicus - Monoclinic Form
Other atoms:
Ca (3);
-
8a8g (Zn: 1) - Atp Sulfurylase From Methanothermococcus Thermolithotrophicus - Orthorhombic Form
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8a8z (Zn: 2) - Crystal Structure of Danio Rerio HDAC6 CD2 in Complex with in Situ Enzymatically Hydrolyzed Dfmo-Based ITF5924
Other atoms:
K (4);
-
8a92 (Zn: 2) - P53-Y220C Core Domain in Complex with A Bromo-Trifluoro-Pyrazole-Amine
Other atoms:
Br (3);
F (9);
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8a9j (Zn: 1) - Cryo-Em Structure of USP1-UAF1 Bound to Fanci and Mono-Ubiquitinated FANCD2 Without ML323 (Consensus Reconstruction)
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8a9k (Zn: 1) - Cryo-Em Structure of USP1-UAF1 Bound to Fanci and Mono-Ubiquitinated FANCD2 with ML323 (Consensus Reconstruction)
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8aa6 (Zn: 1) - Caii in Complex with Meta-Carboran-Propylsulfonamid
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8aae (Zn: 1) - Caii in Complex with Para-Carboran-Propylsulfonamid
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8aaj (Zn: 1) - Crystal Structure of the Pyrococcus Abyssi Rpa (Apo Form)
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8aas (Zn: 1) - Crystal Structure of the Pyrococcus Abyssi Rpa Trimerization Core Bound to Poly-DT20 Ssdna
Other atoms:
Ca (5);
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8ab0 (Zn: 3) - Complex of Reco-Recr-Dna From Thermus Thermophilus.
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8aby (Zn: 2) - Rna Polymerase Bound to Purified in Vitro Transcribed Regulatory Rna Putl - Pause Prone, Closed Clamp State
Other atoms:
Mg (1);
-
8abz (Zn: 2) - Rna Polymerase at U-Rich Pause Bound to Non-Regulatory Rna - Pause Prone, Closed Clamp State
Other atoms:
Mg (1);
-
8ac0 (Zn: 2) - Rna Polymerase at U-Rich Pause Bound to Regulatory Rna Putl - Active, Closed Clamp State
Other atoms:
Mg (1);
-
8ac1 (Zn: 2) - Rna Polymerase at U-Rich Pause Bound to Non-Regulatory Rna - Inactive, Open Clamp State
Other atoms:
Mg (1);
-
8ac2 (Zn: 2) - Rna Polymerase- Post-Terminated, Open Clamp State
Other atoms:
Mg (1);
-
8ac7 (Zn: 8) - Structure of Pseudomonas Aeruginosa Aminopeptidase, Paap
Other atoms:
Na (9);
Page generated: Thu Dec 28 12:48:20 2023
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