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Zinc in PDB, part 486 (files: 19401-19440), PDB 830c-8ac7

Experimental structures of coordination spheres of Zinc (Zn) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Zinc atoms. PDB files: 19401-19440 (PDB 830c-8ac7).
  1. 830c (Zn: 4) - Collagenase-3 (Mmp-13) Complexed to A Sulphone-Based Hydroxamic Acid
    Other atoms: Cl (2); Ca (2);
  2. 8a0b (Zn: 3) - Inhibitor Binding to HDAC2
    Other atoms: Na (3); Ca (3);
  3. 8a0c (Zn: 2) - Capsular Polysaccharide Synthesis Multienzyme in Complex with Cmp
  4. 8a23 (Zn: 2) - Crystal Structure of Sars-Cov-2 NSP10/NSP16 Methyltransferase in Complex with TO383
  5. 8a28 (Zn: 2) - Structure of the Astacin Zymogen of Last-Mam From Limulus Polyphemus
    Other atoms: Mg (1);
  6. 8a31 (Zn: 2) - P53 Cancer Mutant Y220C in Complex with Iodophenol-Based Small- Molecule Stabilizer JC694
    Other atoms: F (3); I (6);
  7. 8a32 (Zn: 2) - P53 Cancer Mutant Y220C in Complex with Iodophenol-Based Small- Molecule Stabilizer JC769
    Other atoms: I (4); F (4);
  8. 8a38 (Zn: 7) - Ring Domain of Human TRIM2
  9. 8a3n (Zn: 4) - Geissoschizine Synthase From Catharanthus Roseus - Binary Complex with Nadp+
  10. 8a3t (Zn: 3) - S. Cerevisiae Apc/C-CDH1 Complex
  11. 8a40 (Zn: 11) - Structure of Mammalian Pol II-Tfiis Elongation Complex
    Other atoms: Mg (3);
  12. 8a4i (Zn: 8) - Crystal Structure of SALL4 Zinc Finger Cluster 4 with at-Rich Dna
    Other atoms: Mg (3);
  13. 8a4m (Zn: 3) - Crystal Structure of the Vim-2 Acquired Metallo-Beta-Lactamase in Complex with Compound 8 (Jmv-7061)
  14. 8a57 (Zn: 2) - Cryo-Em Structure of Hflxr Bound to the Listeria Monocytogenes 50S Ribosomal Subunit.
    Other atoms: Mg (160); K (1);
  15. 8a58 (Zn: 4) - X-Ray Structure of TRIM21 Ring E3 Ligase in Complex with E2 Enzyme UBE2W
  16. 8a5e (Zn: 1) - Cryo-Em Structure of the Electron Bifurcating Fe-Fe Hydrogenase Hydabc Complex From Acetobacterium Woodii in the Reduced State
    Other atoms: Fe (54);
  17. 8a5i (Zn: 2) - Cryo-Em Structure of Lincomycin Bound to the Listeria Monocytogenes 50S Ribosomal Subunit.
    Other atoms: K (1); Mg (165);
  18. 8a63 (Zn: 2) - Cryo-Em Structure of Listeria Monocytogenes 50S Ribosomal Subunit.
    Other atoms: Mg (164); K (1);
  19. 8a67 (Zn: 2) - Branched LYS48- and LYS63-Linked Tri-Ubiquitin (K48-K63-UB3) in Complex with Matured Synthetic Nanobody NBSL3.3Q (3RD Generation)
    Other atoms: Cl (1); Na (2);
  20. 8a6t (Zn: 2) - Cryo-Em Structure of the Electron Bifurcating Fe-Fe Hydrogenase Hydabc Complex From Thermoanaerobacter Kivui in the Reduced State
    Other atoms: Fe (72);
  21. 8a76 (Zn: 4) - Metallo-Beta-Lactamase Ndm-1 in Complex with 1,2,4-Triazole-3-Thione Compound 26
    Other atoms: Ca (4);
  22. 8a7d (Zn: 1) - Partial Dimer Complex of Papp-A and Its Inhibitor STC2
    Other atoms: Ca (8);
  23. 8a7e (Zn: 2) - Papp-A Dimer in Complex with Its Inhibitor STC2
    Other atoms: Ca (16);
  24. 8a8d (Zn: 2) - Atp Sulfurylase From Methanothermococcus Thermolithotrophicus - Monoclinic Form
    Other atoms: Ca (3);
  25. 8a8g (Zn: 1) - Atp Sulfurylase From Methanothermococcus Thermolithotrophicus - Orthorhombic Form
  26. 8a8z (Zn: 2) - Crystal Structure of Danio Rerio HDAC6 CD2 in Complex with in Situ Enzymatically Hydrolyzed Dfmo-Based ITF5924
    Other atoms: K (4);
  27. 8a92 (Zn: 2) - P53-Y220C Core Domain in Complex with A Bromo-Trifluoro-Pyrazole-Amine
    Other atoms: Br (3); F (9);
  28. 8a9j (Zn: 1) - Cryo-Em Structure of USP1-UAF1 Bound to Fanci and Mono-Ubiquitinated FANCD2 Without ML323 (Consensus Reconstruction)
  29. 8a9k (Zn: 1) - Cryo-Em Structure of USP1-UAF1 Bound to Fanci and Mono-Ubiquitinated FANCD2 with ML323 (Consensus Reconstruction)
  30. 8aa6 (Zn: 1) - Caii in Complex with Meta-Carboran-Propylsulfonamid
  31. 8aae (Zn: 1) - Caii in Complex with Para-Carboran-Propylsulfonamid
  32. 8aaj (Zn: 1) - Crystal Structure of the Pyrococcus Abyssi Rpa (Apo Form)
  33. 8aas (Zn: 1) - Crystal Structure of the Pyrococcus Abyssi Rpa Trimerization Core Bound to Poly-DT20 Ssdna
    Other atoms: Ca (5);
  34. 8ab0 (Zn: 3) - Complex of Reco-Recr-Dna From Thermus Thermophilus.
  35. 8aby (Zn: 2) - Rna Polymerase Bound to Purified in Vitro Transcribed Regulatory Rna Putl - Pause Prone, Closed Clamp State
    Other atoms: Mg (1);
  36. 8abz (Zn: 2) - Rna Polymerase at U-Rich Pause Bound to Non-Regulatory Rna - Pause Prone, Closed Clamp State
    Other atoms: Mg (1);
  37. 8ac0 (Zn: 2) - Rna Polymerase at U-Rich Pause Bound to Regulatory Rna Putl - Active, Closed Clamp State
    Other atoms: Mg (1);
  38. 8ac1 (Zn: 2) - Rna Polymerase at U-Rich Pause Bound to Non-Regulatory Rna - Inactive, Open Clamp State
    Other atoms: Mg (1);
  39. 8ac2 (Zn: 2) - Rna Polymerase- Post-Terminated, Open Clamp State
    Other atoms: Mg (1);
  40. 8ac7 (Zn: 8) - Structure of Pseudomonas Aeruginosa Aminopeptidase, Paap
    Other atoms: Na (9);
Page generated: Thu Dec 28 12:48:20 2023

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