Zinc in PDB 7xbh: The Complex Structure of RSHSTT182/200 Rbd Bound to Human ACE2

Protein crystallography data

The structure of The Complex Structure of RSHSTT182/200 Rbd Bound to Human ACE2, PDB code: 7xbh was solved by Y.Hu, K.F.Liu, P.Han, J.X.Qi, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.64 / 3.02
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 155.413, 155.229, 60.996, 90, 103.66, 90
R / Rfree (%) 20.1 / 23.5

Zinc Binding Sites:

The binding sites of Zinc atom in the The Complex Structure of RSHSTT182/200 Rbd Bound to Human ACE2 (pdb code 7xbh). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the The Complex Structure of RSHSTT182/200 Rbd Bound to Human ACE2, PDB code: 7xbh:

Zinc binding site 1 out of 1 in 7xbh

Go back to Zinc Binding Sites List in 7xbh
Zinc binding site 1 out of 1 in the The Complex Structure of RSHSTT182/200 Rbd Bound to Human ACE2


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of The Complex Structure of RSHSTT182/200 Rbd Bound to Human ACE2 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn705

b:83.9
occ:1.00
NE2 A:HIS374 2.1 79.7 1.0
OE2 A:GLU402 2.1 78.3 1.0
OE1 A:GLU402 2.1 66.7 1.0
NE2 A:HIS378 2.3 89.9 1.0
CD A:GLU402 2.4 66.6 1.0
O A:HOH803 2.5 47.9 1.0
CD2 A:HIS374 3.0 62.0 1.0
CE1 A:HIS374 3.2 81.2 1.0
CE1 A:HIS378 3.2 64.1 1.0
CD2 A:HIS378 3.3 78.5 1.0
OE2 A:GLU375 3.8 69.5 1.0
CG A:GLU402 3.9 61.1 1.0
CG A:HIS374 4.2 66.6 1.0
ND1 A:HIS374 4.2 78.5 1.0
ND1 A:HIS378 4.3 61.0 1.0
CG A:HIS378 4.4 60.4 1.0
CD A:GLU375 4.4 65.1 1.0
OE1 A:GLU375 4.4 85.8 1.0
CB A:GLU402 4.6 66.7 1.0
CE1 A:TYR515 4.6 62.5 1.0
OH A:TYR515 4.7 61.3 1.0
CA A:GLU402 4.8 74.3 1.0

Reference:

Y.Hu, K.Liu, P.Han, Z.Xu, A.Zheng, X.Pan, Y.Jia, C.Su, L.Tang, L.Wu, B.Bai, X.Zhao, T.Di, Z.Chen, J.Qi, Q.Wang, G.F.Gao. Host Range and Structural Analysis of Bat-Origin RSHSTT182/200 Coronavirus Binding to Human ACE2 and Its Animal Orthologs. Embo J. 11737 2022.
ISSN: ESSN 1460-2075
PubMed: 36519268
DOI: 10.15252/EMBJ.2022111737
Page generated: Sat Apr 8 05:51:16 2023

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