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Zinc in PDB, part 421 (files: 16801-16840), PDB 7av1-7bj9

Experimental structures of coordination spheres of Zinc (Zn) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Zinc atoms. PDB files: 16801-16840 (PDB 7av1-7bj9).
  1. 7av1 (Zn: 1) - LTA4 Hydrolase in Complex with FRAGMENT2
    Other atoms: Yb (2);
  2. 7av2 (Zn: 1) - LTA4 Hydrolase in Complex with FRAGMENT1
    Other atoms: Yb (2);
  3. 7av7 (Zn: 12) - Crystal Structure of S-Nitrosylated Nitrosoglutathione Reductase(Gsnor)From Chlamydomonas Reinhardtii, in Complex with Nad+
    Other atoms: Cl (1);
  4. 7ax5 (Zn: 525) - Anammox-Specific Acyl Carrier Protein From Kuenenia Stuttgartiensis; Ensemble Refinement
  5. 7ay0 (Zn: 2) - Crystal Structure of Truncated USP1-UAF1
  6. 7ay1 (Zn: 1) - Cryo-Em Structure of USP1-UAF1 Bound to Mono-Ubiquitinated FANCD2, and Fanci
  7. 7ay2 (Zn: 2) - Crystal Structure of Truncated USP1-UAF1 Reacted with Ubiquitin-Prg
  8. 7ay6 (Zn: 2) - Crystal Structure of the PDE4D Catalytic Domain in Complex with Gebr- 41B
    Other atoms: Mg (8);
  9. 7ayj (Zn: 2) - Metallo Beta-Lactamse Vim-1 with A Sulfamoyl Inhibitor.
    Other atoms: F (1);
  10. 7b0i (Zn: 3) - Structure of A Minimal SF3B Core in Complex with Spliceostatin A (Form II)
  11. 7b0y (Zn: 8) - Structure of A Transcribing Rna Polymerase II-U1 Snrnp Complex
    Other atoms: Mg (1);
  12. 7b38 (Zn: 1) - Torpedo Californica Acetylcholinesterase Complexed with Mg+2
    Other atoms: Mg (4);
  13. 7b3b (Zn: 2) - Structure of Elongating Sars-Cov-2 Rna-Dependent Rna Polymerase with Remdesivir at Position -3 (Structure 1)
  14. 7b3c (Zn: 2) - Structure of Elongating Sars-Cov-2 Rna-Dependent Rna Polymerase with Remdesivir at Position -4 (Structure 2)
  15. 7b3d (Zn: 2) - Structure of Elongating Sars-Cov-2 Rna-Dependent Rna Polymerase with Amp at Position -4 (Structure 3)
  16. 7b5l (Zn: 9) - Ubiquitin Ligation to F-Box Protein Substrates By Scf-Rbr E3-E3 Super- Assembly: NEDD8-CUL1-RBX1-SKP1-SKP2-CKSHS1-Cyclin A-CDK2-P27- UBE2L3~Ub~ARIH1. Transition State 1
  17. 7b5m (Zn: 5) - Ubiquitin Ligation to F-Box Protein Substrates By Scf-Rbr E3-E3 Super- Assembly: CUL1-RBX1-SKP1-SKP2-CKSHS1-P27~Ub~ARIH1. Transition State 2
  18. 7b5n (Zn: 9) - Ubiquitin Ligation to F-Box Protein Substrates By Scf-Rbr E3-E3 Super- Assembly: NEDD8-CUL1-RBX1-UBE2L3~Ub~ARIH1.
  19. 7b5s (Zn: 5) - Ubiquitin Ligation to F-Box Protein Substrates By Scf-Rbr E3-E3 Super- Assembly: CUL1-RBX1-ARIH1 Ariadne. Transition State 1
  20. 7b7u (Zn: 6) - Cryo-Em Structure of Mammalian Rna Polymerase II in Complex with Human RPAP2
  21. 7b83 (Zn: 1) - Structure of Sars-Cov-2 Main Protease Bound to Pyrithione Zinc
    Other atoms: Cl (1);
  22. 7b8e (Zn: 1) - Torpedo Californica Acetylcholinesterase Complexed with Ca+2
    Other atoms: Ca (1);
  23. 7b91 (Zn: 3) - Structure of A Minimal SF3B Core in Complex with Pladienolide D (Form I)
  24. 7b92 (Zn: 3) - Structure of A Minimal SF3B Core in Complex with Sudemycin D6 (Form II)
  25. 7b93 (Zn: 1) - Cryo-Em Structure of Mitochondrial Complex I From Mus Musculus Inhibited By Iacs-2858 at 3.0 A
    Other atoms: F (3); Fe (28);
  26. 7b9c (Zn: 3) - Structure of A Minimal SF3B Core in Complex with Spliceostatin A (Form I)
  27. 7b9h (Zn: 2) - Crystal Structure of the PDE4D Catalytic Domain in Complex with Gebr- 42A
    Other atoms: Mg (8);
  28. 7bad (Zn: 1) - Crystal Structure of Pafb in Complex with P-Sulfonato-Calix[8]Arene and Zinc
  29. 7baf (Zn: 3) - Crystal Structure of Pafb in Complex with Zinc
  30. 7bbd (Zn: 2) - Crystal Structure of Monoubiquitinated TRIM21 Ring (Ub-Ring) in Complex with Ubiquitin Charged UBE2N (UBE2N~Ub) and UBE2V2
  31. 7bez (Zn: 2) - Zinc Bound Domain 3 of Carbonic Anhydrase From Marine Diatom Thalassiosira Weissflogii
  32. 7bf0 (Zn: 2) - Zn-Bound Domain 3 of CDCA1 in Complex with Carbon Dioxide
    Other atoms: Cl (1);
  33. 7bfz (Zn: 2) - X-Ray Structure of Human Prostate-Specific Membrane Antigen(Psma) in Complex with A Inhibitor Glu-490
    Other atoms: Na (2); Cl (1); Ca (1);
  34. 7bgm (Zn: 9) - Crystal Structure of MTHISN2, A Bifunctional Enzyme From the Histidine Biosynthetic Pathway
  35. 7bgn (Zn: 18) - Crystal Structure of MTHISN2-Amp Complex, A Bifunctional Enzyme From the Histidine Biosynthetic Pathway
    Other atoms: Mg (1);
  36. 7bh9 (Zn: 1) - Sars-Cov-2 Rbd-62 in Complex with ACE2 Peptidase Domain
  37. 7bi5 (Zn: 1) - Human Ca II in Complex with Benzyl Alcohol
  38. 7bj1 (Zn: 3) - Crystal Structure of SMYD3 with Diperodon S Enantiomer Bound to Allosteric Site
  39. 7bj8 (Zn: 2) - Structure of L1 with 2-Mercaptomethyl-Thiazolidine D-Syn-1B
  40. 7bj9 (Zn: 2) - Structure of Sfh-I with 2-Mercaptomethyl-Thiazolidine L-Anti-1A
Page generated: Sat Sep 25 15:22:51 2021

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