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Zinc in PDB, part 406 (files: 16201-16240), PDB 6t6r-6tm5

Experimental structures of coordination spheres of Zinc (Zn) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Zinc atoms. PDB files: 16201-16240 (PDB 6t6r-6tm5).
  1. 6t6r (Zn: 1) - Human Endoplasmic Reticulum Aminopeptidase 1 (ERAP1) in Complex with (4AR,5S,6R,8S,8AR)-5-(2-(Furan-3-Yl)Ethyl)-8-Hydroxy-5,6,8A- Trimethyl-3,4,4A,5,6,7,8,8A-Octahydronaphthalene-1-Carboxylic Acid
  2. 6t70 (Zn: 1) - Structure of the Bottromycin Epimerase Both in Complex with Bottromycin A2 Derivative
    Other atoms: Cl (1);
  3. 6t7f (Zn: 6) - Rcr E3 Ligase E2-Ubiquitin Transthiolation Intermediate
  4. 6t7l (Zn: 2) - Crystal Structure of Ampc From E.Coli with Nacubactam (OP0595)
    Other atoms: Cl (1);
  5. 6t7u (Zn: 1) - Carborane Inhibitor of Carbonic Anhydrase IX
  6. 6t81 (Zn: 1) - Human Carbonic Anhydrase II Bound By 2-Naphthalenesulfonamide.
    Other atoms: Na (1);
  7. 6t8h (Zn: 4) - Cryo-Em Structure of the Dna-Bound Pold-Pcna Processive Complex From P. Abyssi
    Other atoms: Fe (1);
  8. 6t9l (Zn: 8) - Saga Dub Module Bound to A Ubiqitinated Nucleosome
  9. 6t9y (Zn: 1) - Carboxypeptidase T with N-Sulfamoyl-L-Lysin
    Other atoms: Ca (4);
  10. 6t9z (Zn: 1) - Nidocarborane Inhibitor of Carbonic Anhydrase IX
  11. 6tap (Zn: 1) - Structure of the DARC1 Capsid
  12. 6tas (Zn: 2) - Structure of the Two-Fold Capsomer of the DARC1 Capsid
  13. 6tax (Zn: 2) - Mouse RNF213 Wild Type Protein
    Other atoms: Mg (1);
  14. 6tay (Zn: 2) - Mouse RNF213 Mutant R4753K Modeling the Moyamoya-Disease-Related Human Variant R4810K
    Other atoms: Mg (1);
  15. 6tbq (Zn: 5) - AA13 Lytic Polysaccharide Monooxygenase From Aspergillus Oryzae Partially in Cu(II) State
    Other atoms: Cu (1);
  16. 6tbr (Zn: 12) - Glycosylated AA13 Lytic Polysaccharide Monooxygenase From Aspergillus Oryzae in P1 Space Group
  17. 6tbw (Zn: 2) - Crystal Structure of Ampc From E.Coli with Avibactam
    Other atoms: Cl (1);
  18. 6tbz (Zn: 1) - Crystal Structure of the MH1 Domain of SMAD5-SMAD3 Chimera Construct Bound to the Ggcgc Site
  19. 6tc2 (Zn: 2) - Monoclinic Human Insulin in Complex with P-Coumaric Acid
  20. 6tc4 (Zn: 13) - AA13 Lytic Polysaccharide Monooxygenase From Aspergillus Oryzae Measured with Ssx
    Other atoms: Cl (1);
  21. 6tc6 (Zn: 2) - Crystal Structure of Mutm From Neisseria Meningitidis
  22. 6tc9 (Zn: 2) - Crystal Structure of Mutm From Neisseria Meningitidis
    Other atoms: Mg (1);
  23. 6tce (Zn: 1) - Crystal Structure of the Ggct Site-Bound MH1 Domain of SMAD5 Containing A Gggs Insertion in the LOOP1
  24. 6tda (Zn: 1) - Structure of Swi/Snf Chromatin Remodeler Rsc Bound to A Nucleosome
  25. 6ted (Zn: 9) - Structure of Complete, Activated Transcription Complex Pol II-Dsif- Paf-SPT6 Uncovers Allosteric Elongation Activation By RTF1
    Other atoms: Mg (1);
  26. 6tgd (Zn: 4) - Crystal Structure of Ndm-1 in Complex with Triazole-Based Inhibitor OP31
    Other atoms: Ca (4);
  27. 6tgi (Zn: 6) - Crystal Structure of Vim-2 in Complex with Triazole-Based Inhibitor OP24
    Other atoms: Cl (2);
  28. 6thh (Zn: 1) - Crystal Structure of Type I-D Crispr-Cas Nuclease CAS10D in Complex with the SIRV3 ACRID1 (GP02) Anti-Crispr Protein
  29. 6thk (Zn: 8) - Structural Mechanism of Pyocin S5 Import Into Pseudomonas Aeruginosa
  30. 6thp (Zn: 2) - Neprilysin in Complex with the Inhibitor (R)-4-(1-Carboxy-3-(3'- Chlorobiphenyl-4-Yl)Propan-2-Ylamino)-4-Oxobutanoic Acid
    Other atoms: Cl (2);
  31. 6thv (Zn: 1) - X-Ray Structure of the Danio Rerio Histone Deacetylase 6 (HDAC6; Catalytic Domain 2) in Complex with Tubastatin A
    Other atoms: K (3); Na (1);
  32. 6tjv (Zn: 1) - Structure of the Ndh-1MS Complex From Thermosynechococcus Elongatus
    Other atoms: Mg (1); Fe (12);
  33. 6tl0 (Zn: 25) - Solution Structure and 1H, 13C and 15N Chemical Shift Assignments For the Complex of VPS29 with Varp 687-747
  34. 6tl5 (Zn: 4) - Three Dimensional Structure of Human Carbonic Anhydrase IX in Complex with Sulfonamide
  35. 6tl6 (Zn: 4) - Three Dimensional Structure of Human Carbonic Anhydrase IX in Complex with Sulfonamide
  36. 6tld (Zn: 4) - Crystal Structure of Schistosoma Mansoni HDAC8 Complexed with A Triazole Hydroxamate Inhibitor 2
    Other atoms: K (8);
  37. 6tli (Zn: 1) - Thermolysin (60% Isopropanol Soaked Crystals)
    Other atoms: Ca (4);
  38. 6tlx (Zn: 2) - Crystal Structure of the Unconventional Kinetochore Protein Perkinsela Sp. KKT2A Central Domain
  39. 6tly (Zn: 3) - Crystal Structure of the Unconventional Kinetochore Protein Bodo Saltans KKT2 Central Domain
    Other atoms: Cl (1);
  40. 6tm5 (Zn: 3) - Cryo-Em Structure of the Anaphase-Promoting Complex/Cyclosome, in Complex with the NEK2A Substrate at 3.9 Angstrom Resolution
Page generated: Sat Feb 15 18:23:35 2025

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